RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 LSAMPQ13449 338 aa5.27□□□□□ -1.57
DENND4A-205ENST00000562540 ACBD5Q5T8D3 534 aaPredicted RBP5.27□□□□□ -1.57
DENND4A-205ENST00000562540 RALYLQ86SE5 291 aaKnown RBP5.27□□□□□ -1.57
DENND4A-205ENST00000562540 METTL16Q86W50 562 aaKnown RBP5.27□□□□□ -1.57
DENND4A-205ENST00000562540 ANAPC16Q96DE5 110 aa5.27□□□□□ -1.57
DENND4A-205ENST00000562540 ZNF341Q9BYN7 854 aa5.27□□□□□ -1.57
DENND4A-205ENST00000562540 EPB41L1Q9H4G0 881 aa5.27□□□□□ -1.57
DENND4A-205ENST00000562540 PODXL2Q9NZ53 605 aa5.27□□□□□ -1.57
DENND4A-205ENST00000562540 LRP2BPQ9P2M1 347 aa5.27□□□□□ -1.57
DENND4A-205ENST00000562540 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.27□□□□□ -1.57
DENND4A-205ENST00000562540 CPP00450 1065 aa5.26□□□□□ -1.57
DENND4A-205ENST00000562540 SCG5P05408 212 aa5.26□□□□□ -1.57
DENND4A-205ENST00000562540 ITGAVP06756 1048 aa5.26□□□□□ -1.57
DENND4A-205ENST00000562540 LCP1P13796 627 aa5.26□□□□□ -1.57
DENND4A-205ENST00000562540 PRSS53Q2L4Q9 553 aa5.26□□□□□ -1.57
DENND4A-205ENST00000562540 SV2CQ496J9 727 aa5.26□□□□□ -1.57
DENND4A-205ENST00000562540 HS1BP3Q53T59 392 aa5.26□□□□□ -1.57
DENND4A-205ENST00000562540 ZNF227Q86WZ6 799 aa5.26□□□□□ -1.57
DENND4A-205ENST00000562540 KREMEN2Q8NCW0 462 aa5.26□□□□□ -1.57
DENND4A-205ENST00000562540 Q8TCH9 128 aa5.26□□□□□ -1.57
DENND4A-205ENST00000562540 PHOSPHO1Q8TCT1 267 aa5.26□□□□□ -1.57
DENND4A-205ENST00000562540 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.26□□□□□ -1.57
DENND4A-205ENST00000562540 SEC16BQ96JE7 1060 aa5.26□□□□□ -1.57
DENND4A-205ENST00000562540 C11orf21Q9P2W6 132 aa5.26□□□□□ -1.57
DENND4A-205ENST00000562540 ADAM29Q9UKF5 820 aa5.26□□□□□ -1.57
DENND4A-205ENST00000562540 STRIP2Q9ULQ0 834 aa5.26□□□□□ -1.57
DENND4A-205ENST00000562540 WASF3Q9UPY6 502 aa5.26□□□□□ -1.57
DENND4A-205ENST00000562540 TESMINQ9Y4I5 508 aa5.26□□□□□ -1.57
DENND4A-205ENST00000562540 MAFKO60675 156 aa5.25□□□□□ -1.57
DENND4A-205ENST00000562540 TESK1Q15569 626 aa5.25□□□□□ -1.57
DENND4A-205ENST00000562540 VASNQ6EMK4 673 aa5.25□□□□□ -1.57
DENND4A-205ENST00000562540 NUDT10Q8NFP7 164 aa5.25□□□□□ -1.57
DENND4A-205ENST00000562540 NUDT11Q96G61 164 aa5.25□□□□□ -1.57
DENND4A-205ENST00000562540 SMOC1Q9H4F8 434 aa5.25□□□□□ -1.57
DENND4A-205ENST00000562540 RBPJLQ9UBG7 517 aa5.25□□□□□ -1.57
DENND4A-205ENST00000562540 CNOT4O95628 575 aaKnown RBP5.24□□□□□ -1.57
DENND4A-205ENST00000562540 COL6A1P12109 1028 aa5.24□□□□□ -1.57
DENND4A-205ENST00000562540 SF1Q15637 639 aaKnown RBP5.24□□□□□ -1.57
DENND4A-205ENST00000562540 ZNF575Q86XF7 245 aa5.24□□□□□ -1.57
DENND4A-205ENST00000562540 NT5DC4Q86YG4 428 aa5.24□□□□□ -1.57
DENND4A-205ENST00000562540 CCDC140Q96MF4 163 aa5.24□□□□□ -1.57
DENND4A-205ENST00000562540 ASH2LQ9UBL3 628 aa5.24□□□□□ -1.57
DENND4A-205ENST00000562540 KRIT1O00522 736 aa5.23□□□□□ -1.57
DENND4A-205ENST00000562540 KLHL18O94889 574 aa5.23□□□□□ -1.57
DENND4A-205ENST00000562540 GFRA1P56159 465 aa5.23□□□□□ -1.57
DENND4A-205ENST00000562540 PHF19Q5T6S3 580 aa5.23□□□□□ -1.57
DENND4A-205ENST00000562540 C6orf15Q6UXA7 325 aaPredicted RBP5.23□□□□□ -1.57
DENND4A-205ENST00000562540 Q6ZUG5 572 aa5.23□□□□□ -1.57
DENND4A-205ENST00000562540 TRIM48Q8IWZ4 208 aa5.23□□□□□ -1.57
DENND4A-205ENST00000562540 DTX3Q8N9I9 347 aa5.23□□□□□ -1.57
DENND4A-205ENST00000562540 GNRHR2Q96P88 292 aa5.23□□□□□ -1.57
DENND4A-205ENST00000562540 LRRC37BQ96QE4 947 aa5.23□□□□□ -1.57
DENND4A-205ENST00000562540 LMF1Q96S06 567 aa5.23□□□□□ -1.57
DENND4A-205ENST00000562540 SEC61A2Q9H9S3 476 aa5.23□□□□□ -1.57
DENND4A-205ENST00000562540 DLL4Q9NR61 685 aa5.23□□□□□ -1.57
DENND4A-205ENST00000562540 HSPBP1Q9NZL4 362 aa5.23□□□□□ -1.57
DENND4A-205ENST00000562540 B2RBV5 119 aa5.22□□□□□ -1.57
DENND4A-205ENST00000562540 NPIPB8E9PQR5 432 aa5.22□□□□□ -1.57
DENND4A-205ENST00000562540 FBXO21O94952 628 aa5.22□□□□□ -1.57
DENND4A-205ENST00000562540 VAMP1P23763 118 aa5.22□□□□□ -1.57
DENND4A-205ENST00000562540 GRIN1Q05586 938 aa5.22□□□□□ -1.57
DENND4A-205ENST00000562540 HNRNPA0Q13151 305 aaKnown RBP5.22□□□□□ -1.57
DENND4A-205ENST00000562540 FHL2Q14192 279 aa5.22□□□□□ -1.57
DENND4A-205ENST00000562540 PRKD1Q15139 912 aaPredicted RBP5.22□□□□□ -1.57
DENND4A-205ENST00000562540 SMAD2Q15796 467 aaKnown RBP5.22□□□□□ -1.57
DENND4A-205ENST00000562540 SMN1Q16637 294 aaKnown RBP5.22□□□□□ -1.57
DENND4A-205ENST00000562540 LARP1BQ659C4 914 aaKnown RBP5.22□□□□□ -1.57
DENND4A-205ENST00000562540 CYP4F22Q6NT55 531 aa5.22□□□□□ -1.57
DENND4A-205ENST00000562540 PROSER1Q86XN7 944 aa5.22□□□□□ -1.57
DENND4A-205ENST00000562540 FAM178BQ8IXR5 827 aa5.22□□□□□ -1.57
DENND4A-205ENST00000562540 IFNL2Q8IZJ0 200 aa5.22□□□□□ -1.57
DENND4A-205ENST00000562540 TMEM145Q8NBT3 493 aa5.22□□□□□ -1.57
DENND4A-205ENST00000562540 GIMAP8Q8ND71 665 aaPredicted RBP5.22□□□□□ -1.57
DENND4A-205ENST00000562540 TTLL11Q8NHH1 800 aa5.22□□□□□ -1.57
DENND4A-205ENST00000562540 SLC4A7Q9Y6M7 1214 aa5.22□□□□□ -1.57
DENND4A-205ENST00000562540 FOXS1O43638 330 aa5.21□□□□□ -1.58
DENND4A-205ENST00000562540 SUSD5O60279 629 aa5.21□□□□□ -1.58
DENND4A-205ENST00000562540 CHGBP05060 677 aa5.21□□□□□ -1.58
DENND4A-205ENST00000562540 TGFB2P61812 414 aa5.21□□□□□ -1.58
DENND4A-205ENST00000562540 HDLBPQ00341 1268 aaKnown RBP5.21□□□□□ -1.58
DENND4A-205ENST00000562540 FOXE3Q13461 319 aa5.21□□□□□ -1.58
DENND4A-205ENST00000562540 NRN1LQ496H8 165 aa5.21□□□□□ -1.58
DENND4A-205ENST00000562540 DENND5AQ6IQ26 1287 aa5.21□□□□□ -1.58
DENND4A-205ENST00000562540 TCTN3Q6NUS6 607 aa5.21□□□□□ -1.58
DENND4A-205ENST00000562540 RNF207Q6ZRF8 634 aa5.21□□□□□ -1.58
DENND4A-205ENST00000562540 GPR155Q7Z3F1 870 aa5.21□□□□□ -1.58
DENND4A-205ENST00000562540 PIP4K2CQ8TBX8 421 aa5.21□□□□□ -1.58
DENND4A-205ENST00000562540 ADOQ96SZ5 270 aa5.21□□□□□ -1.58
DENND4A-205ENST00000562540 ACTR10Q9NZ32 417 aa5.21□□□□□ -1.58
DENND4A-205ENST00000562540 SLC27A2O14975 620 aa5.2□□□□□ -1.58
DENND4A-205ENST00000562540 SMAD7O15105 426 aaKnown RBP5.2□□□□□ -1.58
DENND4A-205ENST00000562540 KNG1P01042 644 aa5.2□□□□□ -1.58
DENND4A-205ENST00000562540 CSF2RBP32927 897 aa5.2□□□□□ -1.58
DENND4A-205ENST00000562540 ZNF568Q3ZCX4 644 aa5.2□□□□□ -1.58
DENND4A-205ENST00000562540 C1orf159Q96HA4 380 aa5.2□□□□□ -1.58
DENND4A-205ENST00000562540 AJUBAQ96IF1 538 aa5.2□□□□□ -1.58
DENND4A-205ENST00000562540 SLC6A20Q9NP91 592 aa5.2□□□□□ -1.58
DENND4A-205ENST00000562540 ZFP69BQ9UJL9 534 aa5.2□□□□□ -1.58
DENND4A-205ENST00000562540 ZFR2Q9UPR6 939 aaKnown RBP5.2□□□□□ -1.58
DENND4A-205ENST00000562540 INPP5FQ9Y2H2 1132 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms