RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 NOP56O00567 594 aaKnown RBP18.54■□□□□ 0.56
USB1-206ENST00000562534 TBX3O15119 743 aa18.54■□□□□ 0.56
USB1-206ENST00000562534 STX6O43752 255 aa18.54■□□□□ 0.56
USB1-206ENST00000562534 CABYRO75952 493 aa18.54■□□□□ 0.56
USB1-206ENST00000562534 FARP2O94887 1054 aaPredicted RBP18.54■□□□□ 0.56
USB1-206ENST00000562534 TDP2O95551 362 aa18.54■□□□□ 0.56
USB1-206ENST00000562534 ASGR1P07306 291 aa18.54■□□□□ 0.56
USB1-206ENST00000562534 MNX1P50219 401 aaPredicted RBP18.54■□□□□ 0.56
USB1-206ENST00000562534 ACLYP53396 1101 aa18.54■□□□□ 0.56
USB1-206ENST00000562534 BEX3Q00994 111 aa18.54■□□□□ 0.56
USB1-206ENST00000562534 LENG9Q96B70 501 aa18.54■□□□□ 0.56
USB1-206ENST00000562534 PAWRQ96IZ0 340 aaKnown RBP18.54■□□□□ 0.56
USB1-206ENST00000562534 FAM20AQ96MK3 541 aa18.54■□□□□ 0.56
USB1-206ENST00000562534 RIT2Q99578 217 aa18.54■□□□□ 0.56
USB1-206ENST00000562534 PHF24Q9UPV7 400 aa18.54■□□□□ 0.56
USB1-206ENST00000562534 LRRC37A2A6NM11 1700 aa18.54■□□□□ 0.56
USB1-206ENST00000562534 MYH7BA7E2Y1 1941 aa18.53■□□□□ 0.56
USB1-206ENST00000562534 MYADML2A6NDP7 307 aa18.53■□□□□ 0.56
USB1-206ENST00000562534 KIF28PB7ZC32 967 aa18.53■□□□□ 0.56
USB1-206ENST00000562534 MSH4O15457 936 aa18.53■□□□□ 0.56
USB1-206ENST00000562534 MARCH6O60337 910 aa18.53■□□□□ 0.56
USB1-206ENST00000562534 BAG4O95429 457 aaKnown RBP18.53■□□□□ 0.56
USB1-206ENST00000562534 PTGS1P23219 599 aa18.53■□□□□ 0.56
USB1-206ENST00000562534 IRX5P78411 483 aaPredicted RBP18.53■□□□□ 0.56
USB1-206ENST00000562534 ORC2Q13416 577 aaPredicted RBP18.53■□□□□ 0.56
USB1-206ENST00000562534 HSDL1Q3SXM5 330 aa18.53■□□□□ 0.56
USB1-206ENST00000562534 RILPL1Q5EBL4 403 aa18.53■□□□□ 0.56
USB1-206ENST00000562534 BRAPQ7Z569 592 aa18.53■□□□□ 0.56
USB1-206ENST00000562534 SEPT1Q8WYJ6 367 aa18.53■□□□□ 0.56
USB1-206ENST00000562534 GLT1D1Q96MS3 346 aa18.53■□□□□ 0.56
USB1-206ENST00000562534 SENP6Q9GZR1 1112 aaPredicted RBP18.53■□□□□ 0.56
USB1-206ENST00000562534 C11orf49Q9H6J7 331 aa18.53■□□□□ 0.56
USB1-206ENST00000562534 BCAS3Q9H6U6 928 aa18.53■□□□□ 0.56
USB1-206ENST00000562534 PKD2L1Q9P0L9 805 aa18.53■□□□□ 0.56
USB1-206ENST00000562534 SLC9A2Q9UBY0 812 aa18.53■□□□□ 0.56
USB1-206ENST00000562534 CENPFP49454 3210 aa18.52■□□□□ 0.56
USB1-206ENST00000562534 DHX15O43143 795 aaKnown RBP18.52■□□□□ 0.56
USB1-206ENST00000562534 MMP3P08254 477 aa18.52■□□□□ 0.56
USB1-206ENST00000562534 COL6A1P12109 1028 aa18.52■□□□□ 0.56
USB1-206ENST00000562534 ATP2B1P20020 1258 aa18.52■□□□□ 0.56
USB1-206ENST00000562534 ITGB3BPQ13352 177 aaPredicted RBP18.52■□□□□ 0.56
USB1-206ENST00000562534 UBE2Q1Q7Z7E8 422 aa18.52■□□□□ 0.56
USB1-206ENST00000562534 SLFN12Q8IYM2 578 aa18.52■□□□□ 0.56
USB1-206ENST00000562534 SLC5A5Q92911 643 aa18.52■□□□□ 0.56
USB1-206ENST00000562534 VTI1AQ96AJ9 217 aa18.52■□□□□ 0.56
USB1-206ENST00000562534 ZSCAN16Q9H4T2 348 aaPredicted RBP18.52■□□□□ 0.56
USB1-206ENST00000562534 JPH1Q9HDC5 661 aaPredicted RBP18.52■□□□□ 0.56
USB1-206ENST00000562534 TCEAL9Q9UHQ7 104 aa18.52■□□□□ 0.56
USB1-206ENST00000562534 ELP1O95163 1332 aa18.51■□□□□ 0.55
USB1-206ENST00000562534 SORBS3O60504 671 aa18.51■□□□□ 0.55
USB1-206ENST00000562534 MYL3P08590 195 aa18.51■□□□□ 0.55
USB1-206ENST00000562534 ANP32AP39687 249 aaKnown RBP18.51■□□□□ 0.55
USB1-206ENST00000562534 TTC38Q5R3I4 469 aa18.51■□□□□ 0.55
USB1-206ENST00000562534 GPR20Q99678 358 aa18.51■□□□□ 0.55
USB1-206ENST00000562534 MTG1Q9BT17 334 aaPredicted RBP18.51■□□□□ 0.55
USB1-206ENST00000562534 SEZ6LQ9BYH1 1024 aa18.51■□□□□ 0.55
USB1-206ENST00000562534 KCNMB3Q9NPA1 279 aa18.51■□□□□ 0.55
USB1-206ENST00000562534 DAXXQ9UER7 740 aaPredicted RBP18.51■□□□□ 0.55
USB1-206ENST00000562534 MTMR6Q9Y217 621 aa18.51■□□□□ 0.55
USB1-206ENST00000562534 A0A1W2PQ45 241 aaPredicted RBP18.5■□□□□ 0.55
USB1-206ENST00000562534 A0A1W2PQY0 241 aa18.5■□□□□ 0.55
USB1-206ENST00000562534 SLC37A4O43826 429 aa18.5■□□□□ 0.55
USB1-206ENST00000562534 NEMFO60524 1076 aa18.5■□□□□ 0.55
USB1-206ENST00000562534 GAS7O60861 476 aa18.5■□□□□ 0.55
USB1-206ENST00000562534 HOXD8P13378 290 aaPredicted RBP18.5■□□□□ 0.55
USB1-206ENST00000562534 MCM7P33993 719 aa18.5■□□□□ 0.55
USB1-206ENST00000562534 RGS19P49795 217 aa18.5■□□□□ 0.55
USB1-206ENST00000562534 PURAQ00577 322 aaKnown RBP18.5■□□□□ 0.55
USB1-206ENST00000562534 KRT76Q01546 638 aa18.5■□□□□ 0.55
USB1-206ENST00000562534 ZNF174Q15697 407 aa18.5■□□□□ 0.55
USB1-206ENST00000562534 LRCH2Q5VUJ6 765 aa18.5■□□□□ 0.55
USB1-206ENST00000562534 ZNF746Q6NUN9 644 aaPredicted RBP18.5■□□□□ 0.55
USB1-206ENST00000562534 CXCL17Q6UXB2 119 aa18.5■□□□□ 0.55
USB1-206ENST00000562534 ETNPPLQ8TBG4 499 aa18.5■□□□□ 0.55
USB1-206ENST00000562534 DIS3LQ8TF46 1054 aaKnown RBP18.5■□□□□ 0.55
USB1-206ENST00000562534 FERMT2Q96AC1 680 aa18.5■□□□□ 0.55
USB1-206ENST00000562534 STARD7Q9NQZ5 370 aa18.5■□□□□ 0.55
USB1-206ENST00000562534 GSTTP1A0A1W2PQM5 241 aa18.49■□□□□ 0.55
USB1-206ENST00000562534 CAPN15O75808 1086 aa18.49■□□□□ 0.55
USB1-206ENST00000562534 PSMD10O75832 226 aa18.49■□□□□ 0.55
USB1-206ENST00000562534 ATG7O95352 703 aa18.49■□□□□ 0.55
USB1-206ENST00000562534 TOB1P50616 345 aaPredicted RBP18.49■□□□□ 0.55
USB1-206ENST00000562534 ACTR2P61160 394 aa18.49■□□□□ 0.55
USB1-206ENST00000562534 SP4Q02446 784 aa18.49■□□□□ 0.55
USB1-206ENST00000562534 CALCRLQ16602 461 aa18.49■□□□□ 0.55
USB1-206ENST00000562534 SLC39A5Q6ZMH5 540 aa18.49■□□□□ 0.55
USB1-206ENST00000562534 SMAP1Q8IYB5 467 aaPredicted RBP18.49■□□□□ 0.55
USB1-206ENST00000562534 TEKT3Q9BXF9 490 aa18.49■□□□□ 0.55
USB1-206ENST00000562534 PCDHA12Q9UN75 941 aa18.49■□□□□ 0.55
USB1-206ENST00000562534 TCF7P36402 384 aaPredicted RBP18.48■□□□□ 0.55
USB1-206ENST00000562534 C1orf53Q5VUE5 145 aa18.48■□□□□ 0.55
USB1-206ENST00000562534 FERMT3Q86UX7 667 aa18.48■□□□□ 0.55
USB1-206ENST00000562534 HAS1Q92839 578 aa18.48■□□□□ 0.55
USB1-206ENST00000562534 MTMR9Q96QG7 549 aa18.48■□□□□ 0.55
USB1-206ENST00000562534 UIMC1Q96RL1 719 aa18.48■□□□□ 0.55
USB1-206ENST00000562534 HTATIP2Q9BUP3 242 aa18.48■□□□□ 0.55
USB1-206ENST00000562534 KATNAL1Q9BW62 490 aa18.48■□□□□ 0.55
USB1-206ENST00000562534 PCDHA10Q9Y5I2 948 aa18.48■□□□□ 0.55
USB1-206ENST00000562534 H3BRB1 525 aa18.47■□□□□ 0.55
USB1-206ENST00000562534 DDX39AO00148 427 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms