RNA–Protein interactions for RNA: ENST00000562424.1

FANCA-209, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-209ENST00000562424 PPTC7Q8NI37 304 aa13.2□□□□□ -0.3
FANCA-209ENST00000562424 RIC8AQ9NPQ8 531 aa13.2□□□□□ -0.3
FANCA-209ENST00000562424 SPDYE3A6NKU9 549 aa13.19□□□□□ -0.3
FANCA-209ENST00000562424 B4GALT4O60513 344 aa13.19□□□□□ -0.3
FANCA-209ENST00000562424 GGPS1O95749 300 aa13.19□□□□□ -0.3
FANCA-209ENST00000562424 HOXD8P13378 290 aaPredicted RBP13.19□□□□□ -0.3
FANCA-209ENST00000562424 SCG2P13521 617 aa13.19□□□□□ -0.3
FANCA-209ENST00000562424 ANAPC15P60006 121 aa13.19□□□□□ -0.3
FANCA-209ENST00000562424 SEMA3FQ13275 785 aa13.19□□□□□ -0.3
FANCA-209ENST00000562424 NTRK3Q16288 839 aa13.19□□□□□ -0.3
FANCA-209ENST00000562424 DGKDQ16760 1214 aa13.19□□□□□ -0.3
FANCA-209ENST00000562424 NBPF20Q3BBV1 942 aa13.19□□□□□ -0.3
FANCA-209ENST00000562424 MYSM1Q5VVJ2 828 aa13.19□□□□□ -0.3
FANCA-209ENST00000562424 NFRKBQ6P4R8 1299 aa13.19□□□□□ -0.3
FANCA-209ENST00000562424 TRPV6Q9H1D0 765 aa13.19□□□□□ -0.3
FANCA-209ENST00000562424 ALDH8A1Q9H2A2 487 aaPredicted RBP13.19□□□□□ -0.3
FANCA-209ENST00000562424 RTEL1Q9NZ71 1219 aa13.19□□□□□ -0.3
FANCA-209ENST00000562424 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.19□□□□□ -0.3
FANCA-209ENST00000562424 UNC80Q8N2C7 3258 aa13.19□□□□□ -0.3
FANCA-209ENST00000562424 TRIP12Q14669 1992 aaPredicted RBP13.19□□□□□ -0.3
FANCA-209ENST00000562424 SPATA31C2B4DYI2 1134 aa13.18□□□□□ -0.3
FANCA-209ENST00000562424 PRPF3O43395 683 aaKnown RBP13.18□□□□□ -0.3
FANCA-209ENST00000562424 FIBPO43427 364 aa13.18□□□□□ -0.3
FANCA-209ENST00000562424 IFNAR1P17181 557 aa13.18□□□□□ -0.3
FANCA-209ENST00000562424 ADCY7P51828 1080 aa13.18□□□□□ -0.3
FANCA-209ENST00000562424 CCT2P78371 535 aaKnown RBP13.18□□□□□ -0.3
FANCA-209ENST00000562424 PTPN11Q06124 597 aaPredicted RBP13.18□□□□□ -0.3
FANCA-209ENST00000562424 PKN1Q16512 942 aa13.18□□□□□ -0.3
FANCA-209ENST00000562424 MFSD5Q6N075 450 aa13.18□□□□□ -0.3
FANCA-209ENST00000562424 ZNF274Q96GC6 653 aaPredicted RBP13.18□□□□□ -0.3
FANCA-209ENST00000562424 COL25A1Q9BXS0 654 aaPredicted RBP13.18□□□□□ -0.3
FANCA-209ENST00000562424 RNF26Q9BY78 433 aaPredicted RBP13.18□□□□□ -0.3
FANCA-209ENST00000562424 GLT8D2Q9H1C3 349 aa13.18□□□□□ -0.3
FANCA-209ENST00000562424 EHMT1Q9H9B1 1298 aa13.18□□□□□ -0.3
FANCA-209ENST00000562424 NCOA5Q9HCD5 579 aaKnown RBP13.18□□□□□ -0.3
FANCA-209ENST00000562424 PDRG1Q9NUG6 133 aa13.18□□□□□ -0.3
FANCA-209ENST00000562424 PCDHA6Q9UN73 950 aa13.18□□□□□ -0.3
FANCA-209ENST00000562424 PCDHA8Q9Y5H6 950 aa13.18□□□□□ -0.3
FANCA-209ENST00000562424 KAT6AQ92794 2004 aa13.17□□□□□ -0.3
FANCA-209ENST00000562424 LAMA2P24043 3122 aaKnown RBP13.17□□□□□ -0.3
FANCA-209ENST00000562424 ESYT2A0FGR8 921 aa13.17□□□□□ -0.3
FANCA-209ENST00000562424 SMCO2A6NFE2 343 aa13.17□□□□□ -0.3
FANCA-209ENST00000562424 SORBS3O60504 671 aa13.17□□□□□ -0.3
FANCA-209ENST00000562424 PPFIA4O75335 1185 aa13.17□□□□□ -0.3
FANCA-209ENST00000562424 FOSP01100 380 aaPredicted RBP13.17□□□□□ -0.3
FANCA-209ENST00000562424 SUPT20HL2P0C7V6 817 aa13.17□□□□□ -0.3
FANCA-209ENST00000562424 CLK2P49760 499 aaKnown RBP13.17□□□□□ -0.3
FANCA-209ENST00000562424 FPGSQ05932 587 aa13.17□□□□□ -0.3
FANCA-209ENST00000562424 CAMK2BQ13554 666 aa13.17□□□□□ -0.3
FANCA-209ENST00000562424 NEDD9Q14511 834 aa13.17□□□□□ -0.3
FANCA-209ENST00000562424 HSDL1Q3SXM5 330 aa13.17□□□□□ -0.3
FANCA-209ENST00000562424 NLRX1Q86UT6 975 aa13.17□□□□□ -0.3
FANCA-209ENST00000562424 PLPP6Q8IY26 295 aa13.17□□□□□ -0.3
FANCA-209ENST00000562424 KAT2BQ92831 832 aa13.17□□□□□ -0.3
FANCA-209ENST00000562424 PHKBQ93100 1093 aa13.17□□□□□ -0.3
FANCA-209ENST00000562424 GPRASP2Q96D09 838 aa13.17□□□□□ -0.3
FANCA-209ENST00000562424 IL17RAQ96F46 866 aa13.17□□□□□ -0.3
FANCA-209ENST00000562424 SPATA33Q96N06 139 aa13.17□□□□□ -0.3
FANCA-209ENST00000562424 GUCD1Q96NT3 240 aa13.17□□□□□ -0.3
FANCA-209ENST00000562424 SENP7Q9BQF6 1050 aa13.17□□□□□ -0.3
FANCA-209ENST00000562424 HIPK3Q9H422 1215 aa13.17□□□□□ -0.3
FANCA-209ENST00000562424 MLXIPQ9HAP2 919 aa13.17□□□□□ -0.3
FANCA-209ENST00000562424 F2P00734 622 aa13.16□□□□□ -0.3
FANCA-209ENST00000562424 ITGB5P18084 799 aa13.16□□□□□ -0.3
FANCA-209ENST00000562424 CYP2C18P33260 490 aa13.16□□□□□ -0.3
FANCA-209ENST00000562424 EPHB4P54760 987 aa13.16□□□□□ -0.3
FANCA-209ENST00000562424 AKAP17AQ02040 695 aaKnown RBP13.16□□□□□ -0.3
FANCA-209ENST00000562424 AP3B2Q13367 1082 aa13.16□□□□□ -0.3
FANCA-209ENST00000562424 SHHQ15465 462 aa13.16□□□□□ -0.3
FANCA-209ENST00000562424 FAM47CQ5HY64 1035 aa13.16□□□□□ -0.3
FANCA-209ENST00000562424 C9orf50Q5SZB4 431 aa13.16□□□□□ -0.3
FANCA-209ENST00000562424 METTL7BQ6UX53 244 aa13.16□□□□□ -0.3
FANCA-209ENST00000562424 SESTD1Q86VW0 696 aa13.16□□□□□ -0.3
FANCA-209ENST00000562424 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.16□□□□□ -0.3
FANCA-209ENST00000562424 CCDC12Q8WUD4 166 aaPredicted RBP13.16□□□□□ -0.3
FANCA-209ENST00000562424 PPP1R13LQ8WUF5 828 aa13.16□□□□□ -0.3
FANCA-209ENST00000562424 CDHR1Q96JP9 859 aa13.16□□□□□ -0.3
FANCA-209ENST00000562424 NOC4LQ9BVI4 516 aaKnown RBP13.16□□□□□ -0.3
FANCA-209ENST00000562424 KATNAL1Q9BW62 490 aa13.16□□□□□ -0.3
FANCA-209ENST00000562424 PPP1R12CQ9BZL4 782 aa13.16□□□□□ -0.3
FANCA-209ENST00000562424 ZMYND12Q9H0C1 365 aa13.16□□□□□ -0.3
FANCA-209ENST00000562424 BCAS3Q9H6U6 928 aa13.16□□□□□ -0.3
FANCA-209ENST00000562424 TRMT13Q9NUP7 481 aaKnown RBP13.16□□□□□ -0.3
FANCA-209ENST00000562424 UBIAD1Q9Y5Z9 338 aa13.16□□□□□ -0.3
FANCA-209ENST00000562424 TANC1Q9C0D5 1861 aa13.16□□□□□ -0.3
FANCA-209ENST00000562424 SCN5AQ14524 2016 aa13.15□□□□□ -0.3
FANCA-209ENST00000562424 HAS3O00219 553 aa13.15□□□□□ -0.3
FANCA-209ENST00000562424 ZNF286BP0CG31 522 aa13.15□□□□□ -0.3
FANCA-209ENST00000562424 PSEN2P49810 448 aa13.15□□□□□ -0.3
FANCA-209ENST00000562424 CHMP4BP1P59074 171 aa13.15□□□□□ -0.3
FANCA-209ENST00000562424 PPIGQ13427 754 aaKnown RBP eCLIP13.15□□□□□ -0.37e-15■■■■□ 20.1
FANCA-209ENST00000562424 CYFIP1Q7L576 1253 aa13.15□□□□□ -0.3
FANCA-209ENST00000562424 TMEM199Q8N511 208 aa13.15□□□□□ -0.3
FANCA-209ENST00000562424 PGBD1Q96JS3 809 aa13.15□□□□□ -0.3
FANCA-209ENST00000562424 SLC26A6Q9BXS9 759 aa13.15□□□□□ -0.3
FANCA-209ENST00000562424 ANO3Q9BYT9 981 aa13.15□□□□□ -0.3
FANCA-209ENST00000562424 UMODL1Q5DID0 1318 aa13.14□□□□□ -0.31
FANCA-209ENST00000562424 NOP56O00567 594 aaKnown RBP13.14□□□□□ -0.31
FANCA-209ENST00000562424 CPLX1O14810 134 aa13.14□□□□□ -0.31
FANCA-209ENST00000562424 MAFGO15525 162 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms