RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 GUCD1Q96NT3 240 aa12.73□□□□□ -0.37
LPCAT4-202ENST00000562404 GPR20Q99678 358 aa12.73□□□□□ -0.37
LPCAT4-202ENST00000562404 CHD9Q3L8U1 2897 aa12.72□□□□□ -0.37
LPCAT4-202ENST00000562404 SIP14410 1827 aa12.72□□□□□ -0.37
LPCAT4-202ENST00000562404 SPDYE3A6NKU9 549 aa12.72□□□□□ -0.37
LPCAT4-202ENST00000562404 DTNBO60941 627 aa12.72□□□□□ -0.37
LPCAT4-202ENST00000562404 CENPBP07199 599 aaPredicted RBP12.72□□□□□ -0.37
LPCAT4-202ENST00000562404 IQCF3P0C7M6 154 aa12.72□□□□□ -0.37
LPCAT4-202ENST00000562404 SUPT20HL2P0C7V6 817 aa12.72□□□□□ -0.37
LPCAT4-202ENST00000562404 SCG2P13521 617 aa12.72□□□□□ -0.37
LPCAT4-202ENST00000562404 PBX2P40425 430 aa12.72□□□□□ -0.37
LPCAT4-202ENST00000562404 SMAD3P84022 425 aaKnown RBP12.72□□□□□ -0.37
LPCAT4-202ENST00000562404 SP4Q02446 784 aa12.72□□□□□ -0.37
LPCAT4-202ENST00000562404 GNPTABQ3T906 1256 aa12.72□□□□□ -0.37
LPCAT4-202ENST00000562404 PPP1R18Q6NYC8 613 aa12.72□□□□□ -0.37
LPCAT4-202ENST00000562404 XRRA1Q6P2D8 792 aa12.72□□□□□ -0.37
LPCAT4-202ENST00000562404 METTL7BQ6UX53 244 aa12.72□□□□□ -0.37
LPCAT4-202ENST00000562404 OTOP2Q7RTS6 562 aa12.72□□□□□ -0.37
LPCAT4-202ENST00000562404 DEFB128Q7Z7B8 93 aa12.72□□□□□ -0.37
LPCAT4-202ENST00000562404 HERVK_113Q902F9 699 aa12.72□□□□□ -0.37
LPCAT4-202ENST00000562404 PKD2L1Q9P0L9 805 aa12.72□□□□□ -0.37
LPCAT4-202ENST00000562404 PRPF3O43395 683 aaKnown RBP12.71□□□□□ -0.37
LPCAT4-202ENST00000562404 SEC24BO95487 1268 aa12.71□□□□□ -0.37
LPCAT4-202ENST00000562404 ADCY7P51828 1080 aa12.71□□□□□ -0.37
LPCAT4-202ENST00000562404 NEDD9Q14511 834 aa12.71□□□□□ -0.37
LPCAT4-202ENST00000562404 TCTN1Q2MV58 587 aa12.71□□□□□ -0.37
LPCAT4-202ENST00000562404 TRIM71Q2Q1W2 868 aaKnown RBP12.71□□□□□ -0.37
LPCAT4-202ENST00000562404 JAKMIP3Q5VZ66 844 aa12.71□□□□□ -0.37
LPCAT4-202ENST00000562404 PSRC1Q6PGN9 363 aaPredicted RBP12.71□□□□□ -0.37
LPCAT4-202ENST00000562404 TRAF7Q6Q0C0 670 aa12.71□□□□□ -0.37
LPCAT4-202ENST00000562404 NLRX1Q86UT6 975 aa12.71□□□□□ -0.37
LPCAT4-202ENST00000562404 GPRASP2Q96D09 838 aa12.71□□□□□ -0.37
LPCAT4-202ENST00000562404 SENP7Q9BQF6 1050 aa12.71□□□□□ -0.37
LPCAT4-202ENST00000562404 ANO3Q9BYT9 981 aa12.71□□□□□ -0.37
LPCAT4-202ENST00000562404 TM6SF1Q9BZW5 370 aa12.71□□□□□ -0.37
LPCAT4-202ENST00000562404 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 GSTTP1A0A1W2PQM5 241 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 H3BRB1 525 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 hCG_1984214I3L0E3 225 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 PITPNM1O00562 1244 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 EDIL3O43854 480 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 FGBP02675 491 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 ARP10275 920 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 IFNAR1P17181 557 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 HOXC8P31273 242 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 ZNF713Q8N859 430 aaPredicted RBP12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 C7orf31Q8N865 590 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 RASGRP4Q8TDF6 673 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 CRYGNQ8WXF5 182 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 MXRA8Q9BRK3 442 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 KATNAL1Q9BW62 490 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 PBX4Q9BYU1 374 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 ZMYND12Q9H0C1 365 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 SEMA6BQ9H3T3 888 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 RNPEPQ9H4A4 650 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 TUT1Q9H6E5 874 aaKnown RBP12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 JADE2Q9NQC1 790 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 NOD1Q9Y239 953 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 CYP46A1Q9Y6A2 500 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 CHD7Q9P2D1 2997 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 LOXHD1Q8IVV2 1947 aa12.7□□□□□ -0.38
LPCAT4-202ENST00000562404 CCDC196A0A1B0GTZ2 297 aa12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 NOP56O00567 594 aaKnown RBP12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 SMIM10L2AP0DMW4 78 aa12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 SMIM10L2BP0DMW5 78 aa12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 CKBP12277 381 aa12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 DNAJB2P25686 324 aa12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 TCF7P36402 384 aaPredicted RBP12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 SREBF1P36956 1147 aa12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 RBL2Q08999 1139 aa12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 STK3Q13188 491 aa12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 MTMR1Q13613 665 aa12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 MBTPS1Q14703 1052 aa12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 UTP14CQ5TAP6 766 aaKnown RBP12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 ZNF697Q5TEC3 545 aa12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 UIMC1Q96RL1 719 aa12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 SLC26A6Q9BXS9 759 aa12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 RNF26Q9BY78 433 aaPredicted RBP12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 OSBPL7Q9BZF2 842 aa12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 KCNH7Q9NS40 1196 aa12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 PDRG1Q9NUG6 133 aa12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 VPS54Q9P1Q0 977 aa12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 MICAL3Q7RTP6 2002 aa12.69□□□□□ -0.38
LPCAT4-202ENST00000562404 ESYT2A0FGR8 921 aa12.68□□□□□ -0.38
LPCAT4-202ENST00000562404 FAM86B1E9PN63 330 aa12.68□□□□□ -0.38
LPCAT4-202ENST00000562404 TREHO43280 583 aa12.68□□□□□ -0.38
LPCAT4-202ENST00000562404 NBNO60934 754 aa12.68□□□□□ -0.38
LPCAT4-202ENST00000562404 FAM86B2P0C5J1 330 aa12.68□□□□□ -0.38
LPCAT4-202ENST00000562404 RABGGTBP53611 331 aa12.68□□□□□ -0.38
LPCAT4-202ENST00000562404 ADAM17P78536 824 aa12.68□□□□□ -0.38
LPCAT4-202ENST00000562404 ITGB3BPQ13352 177 aaPredicted RBP12.68□□□□□ -0.38
LPCAT4-202ENST00000562404 ZNF618Q5T7W0 954 aa12.68□□□□□ -0.38
LPCAT4-202ENST00000562404 CAGE1Q8TC20 777 aa12.68□□□□□ -0.38
LPCAT4-202ENST00000562404 AIFM3Q96NN9 605 aa12.68□□□□□ -0.38
LPCAT4-202ENST00000562404 PCYT2Q99447 389 aa12.68□□□□□ -0.38
LPCAT4-202ENST00000562404 CDX2Q99626 313 aaPredicted RBP12.68□□□□□ -0.38
LPCAT4-202ENST00000562404 SETD4Q9NVD3 440 aa12.68□□□□□ -0.38
LPCAT4-202ENST00000562404 YBX2Q9Y2T7 364 aaKnown RBP12.68□□□□□ -0.38
LPCAT4-202ENST00000562404 MYH9P35579 1960 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms