RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 SGSM3Q96HU1 749 aa20.51■□□□□ 0.87
BBS4-204ENST00000562084 SCN7AQ01118 1682 aa20.51■□□□□ 0.87
BBS4-204ENST00000562084 CACNA1SQ13698 1873 aa20.51■□□□□ 0.87
BBS4-204ENST00000562084 OR52Z1P0C646 297 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 SLC1A4P43007 532 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 GUCY2FP51841 1108 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 MRPS25P82663 173 aaKnown RBP20.5■□□□□ 0.87
BBS4-204ENST00000562084 HGSNATQ68CP4 663 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 USP38Q8NB14 1042 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 MS4A14Q96JA4 679 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 CALR3Q96L12 384 aaKnown RBP20.5■□□□□ 0.87
BBS4-204ENST00000562084 KRT12Q99456 494 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 VEZTQ9HBM0 779 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 CD248Q9HCU0 757 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 SLC12A6Q9UHW9 1150 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 A0A1B0GUL6 1792 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 EPHB6O15197 1021 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 SEC24CP53992 1094 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 GFPT1Q06210 699 aaPredicted RBP20.5■□□□□ 0.87
BBS4-204ENST00000562084 NBPF9Q3BBW0 867 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 C10orf76Q5T2E6 689 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 UNC13DQ70J99 1090 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 KIAA0895Q8NCT3 520 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 TAF4BQ92750 862 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 CALML4Q96GE6 196 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 PBKQ96KB5 322 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 TSG101Q99816 390 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 LRRC27Q9C0I9 530 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 RIC8AQ9NPQ8 531 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 STK17AQ9UEE5 414 aa20.5■□□□□ 0.87
BBS4-204ENST00000562084 BHMG1C9JSJ3 638 aaPredicted RBP20.49■□□□□ 0.87
BBS4-204ENST00000562084 PALMO75781 387 aa20.49■□□□□ 0.87
BBS4-204ENST00000562084 GYS1P13807 737 aa20.49■□□□□ 0.87
BBS4-204ENST00000562084 EZRP15311 586 aaKnown RBP20.49■□□□□ 0.87
BBS4-204ENST00000562084 CCDC152Q4G0S7 254 aa20.49■□□□□ 0.87
BBS4-204ENST00000562084 SFMBT2Q5VUG0 894 aa20.49■□□□□ 0.87
BBS4-204ENST00000562084 CYB5D1Q6P9G0 228 aa20.49■□□□□ 0.87
BBS4-204ENST00000562084 ANKS1AQ92625 1134 aa20.49■□□□□ 0.87
BBS4-204ENST00000562084 SWAP70Q9UH65 585 aa20.49■□□□□ 0.87
BBS4-204ENST00000562084 DDX20Q9UHI6 824 aaKnown RBP20.49■□□□□ 0.87
BBS4-204ENST00000562084 ODF2LQ9ULJ1 636 aa20.49■□□□□ 0.87
BBS4-204ENST00000562084 FCER1AP12319 257 aa20.48■□□□□ 0.87
BBS4-204ENST00000562084 PSMD2Q13200 908 aa20.48■□□□□ 0.87
BBS4-204ENST00000562084 IFI16Q16666 785 aaKnown RBP20.48■□□□□ 0.87
BBS4-204ENST00000562084 SBK1Q52WX2 424 aa20.48■□□□□ 0.87
BBS4-204ENST00000562084 ANKRD20A8PQ5CZ79 823 aa20.48■□□□□ 0.87
BBS4-204ENST00000562084 SPDYCQ5MJ68 293 aa20.48■□□□□ 0.87
BBS4-204ENST00000562084 KRT25Q7Z3Z0 450 aa20.48■□□□□ 0.87
BBS4-204ENST00000562084 DGKHQ86XP1 1220 aa20.48■□□□□ 0.87
BBS4-204ENST00000562084 CACNA2D3Q8IZS8 1091 aa20.48■□□□□ 0.87
BBS4-204ENST00000562084 ARPP21Q9UBL0 812 aaPredicted RBP20.48■□□□□ 0.87
BBS4-204ENST00000562084 BUB1O43683 1085 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 HSD17B3P37058 310 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 XRCC4Q13426 336 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 TDRD12Q587J7 1177 aaKnown RBP20.47■□□□□ 0.87
BBS4-204ENST00000562084 SV2BQ7L1I2 683 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 FUKQ8N0W3 1084 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 KDM4CQ9H3R0 1056 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 CNOT10Q9H9A5 744 aaKnown RBP20.47■□□□□ 0.87
BBS4-204ENST00000562084 BAZ2AQ9UIF9 1905 aaKnown RBP20.47■□□□□ 0.87
BBS4-204ENST00000562084 ATP8B3O60423 1300 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 ESYT3A0FGR9 886 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 H0YGN5 161 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 ADAMTS3O15072 1205 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 RAD51CO43502 376 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 DNAJC8O75937 253 aaPredicted RBP20.47■□□□□ 0.87
BBS4-204ENST00000562084 GCFC2P16383 781 aaKnown RBP20.47■□□□□ 0.87
BBS4-204ENST00000562084 PPP2R2AP63151 447 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 GRM4Q14833 912 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 SLC18A3Q16572 532 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 INF2Q27J81 1249 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 PAXIP1Q6ZW49 1069 aaPredicted RBP20.47■□□□□ 0.87
BBS4-204ENST00000562084 LRRC15Q8TF66 581 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 ZNF622Q969S3 477 aaKnown RBP eCLIP20.47■□□□□ 0.873e-7■■□□□ 11.7
BBS4-204ENST00000562084 PLIN2Q99541 437 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 LZTS2Q9BRK4 669 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 PPANQ9NQ55 473 aaKnown RBP20.47■□□□□ 0.87
BBS4-204ENST00000562084 ATP8A2Q9NTI2 1148 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 ABCF2Q9UG63 623 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 ATP6V0A2Q9Y487 856 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 NFS1Q9Y697 457 aa20.47■□□□□ 0.87
BBS4-204ENST00000562084 USP17L12C9JPN9 530 aa20.46■□□□□ 0.87
BBS4-204ENST00000562084 USP17L21D6R901 530 aa20.46■□□□□ 0.87
BBS4-204ENST00000562084 ERCC3P19447 782 aa20.46■□□□□ 0.87
BBS4-204ENST00000562084 CRYMQ14894 314 aa20.46■□□□□ 0.87
BBS4-204ENST00000562084 ANKRD13CQ8N6S4 541 aa20.46■□□□□ 0.87
BBS4-204ENST00000562084 ACTRT1Q8TDG2 376 aa20.46■□□□□ 0.87
BBS4-204ENST00000562084 BARHL2Q9NY43 387 aa20.46■□□□□ 0.87
BBS4-204ENST00000562084 CYP2D7A0A087X1C5 515 aa20.45■□□□□ 0.86
BBS4-204ENST00000562084 CCDC188H7C350 402 aa20.45■□□□□ 0.86
BBS4-204ENST00000562084 GKAP1Q5VSY0 366 aaPredicted RBP20.45■□□□□ 0.86
BBS4-204ENST00000562084 CLEC4GQ6UXB4 293 aa20.45■□□□□ 0.86
BBS4-204ENST00000562084 LRRC55Q6ZSA7 311 aa20.45■□□□□ 0.86
BBS4-204ENST00000562084 BANK1Q8NDB2 785 aa20.45■□□□□ 0.86
BBS4-204ENST00000562084 CENPTQ96BT3 561 aa20.45■□□□□ 0.86
BBS4-204ENST00000562084 SEC16BQ96JE7 1060 aa20.45■□□□□ 0.86
BBS4-204ENST00000562084 CRNKL1Q9BZJ0 848 aaKnown RBP20.45■□□□□ 0.86
BBS4-204ENST00000562084 ATP6V0A4Q9HBG4 840 aa20.45■□□□□ 0.86
BBS4-204ENST00000562084 ZSCAN5CA6NGD5 496 aaPredicted RBP20.45■□□□□ 0.86
BBS4-204ENST00000562084 VEGFAP15692 232 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms