RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 NCAPG2Q86XI2 1143 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 AGBL1Q96MI9 1066 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 ANKRD62A6NC57 917 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 NEK4P51957 841 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 ACVR2BQ13705 512 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 BLIDQ8IZY5 108 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 SPICE1Q8N0Z3 855 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 REXO1Q8N1G1 1221 aaKnown RBP6.41□□□□□ -1.38
LINC01963-201ENST00000562038 ANKRD35Q8N283 1001 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 SLC5A5Q92911 643 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 ZKSCAN3Q9BRR0 538 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 TTYH1Q9H313 450 aaPredicted RBP6.41□□□□□ -1.38
LINC01963-201ENST00000562038 ZSCAN16Q9H4T2 348 aaPredicted RBP6.41□□□□□ -1.38
LINC01963-201ENST00000562038 CNPY2Q9Y2B0 182 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 RIPK3Q9Y572 518 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 PCNTO95613 3336 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 CPLX1O14810 134 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 GH1P01241 217 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 ATXN8OSP0DMR3 200 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 XRCC6P12956 609 aaKnown RBP eCLIP6.41□□□□□ -1.38
LINC01963-201ENST00000562038 FDPSP14324 419 aaKnown RBP6.41□□□□□ -1.38
LINC01963-201ENST00000562038 KRT2P35908 639 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 ARL6IP4Q66PJ3 421 aaKnown RBP6.41□□□□□ -1.38
LINC01963-201ENST00000562038 NFRKBQ6P4R8 1299 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 SLC30A10Q6XR72 485 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 PLPPR4Q7Z2D5 763 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 ANKRD33Q7Z3H0 272 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 MICU3Q86XE3 530 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 SLFN12Q8IYM2 578 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 FBXO18Q8NFZ0 1043 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 MXRA8Q9BRK3 442 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 ANO3Q9BYT9 981 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 COG5Q9UP83 839 aa6.41□□□□□ -1.38
LINC01963-201ENST00000562038 MCM3APO60318 1980 aa6.4□□□□□ -1.38
LINC01963-201ENST00000562038 IGLV3-22A0A075B6J6 115 aa6.4□□□□□ -1.38
LINC01963-201ENST00000562038 PTPDC1A2A3K4 754 aa6.4□□□□□ -1.38
LINC01963-201ENST00000562038 DDIT3P35638 169 aa6.4□□□□□ -1.38
LINC01963-201ENST00000562038 JAK3P52333 1124 aa6.4□□□□□ -1.38
LINC01963-201ENST00000562038 CACNB2Q08289 660 aaPredicted RBP6.4□□□□□ -1.38
LINC01963-201ENST00000562038 PPP2R5CQ13362 524 aa6.4□□□□□ -1.38
LINC01963-201ENST00000562038 PCBP1Q15365 356 aaKnown RBP eCLIP6.4□□□□□ -1.38
LINC01963-201ENST00000562038 RINLQ6ZS11 566 aa6.4□□□□□ -1.38
LINC01963-201ENST00000562038 DPP9Q86TI2 863 aa6.4□□□□□ -1.38
LINC01963-201ENST00000562038 U2AF1L4Q8WU68 220 aaKnown RBP6.4□□□□□ -1.38
LINC01963-201ENST00000562038 POM121Q96HA1 1249 aa6.4□□□□□ -1.38
LINC01963-201ENST00000562038 KCNMB3Q9NPA1 279 aa6.4□□□□□ -1.38
LINC01963-201ENST00000562038 GABRQQ9UN88 632 aa6.4□□□□□ -1.38
LINC01963-201ENST00000562038 RBM19Q9Y4C8 960 aaKnown RBP6.4□□□□□ -1.38
LINC01963-201ENST00000562038 CUL9Q8IWT3 2517 aa6.4□□□□□ -1.38
LINC01963-201ENST00000562038 DOCK3Q8IZD9 2030 aa6.4□□□□□ -1.39
LINC01963-201ENST00000562038 SPDYE3A6NKU9 549 aa6.4□□□□□ -1.39
LINC01963-201ENST00000562038 NFIBO00712 420 aa6.4□□□□□ -1.39
LINC01963-201ENST00000562038 CTAGE5O15320 804 aa6.4□□□□□ -1.39
LINC01963-201ENST00000562038 GAS2O43903 313 aaKnown RBP6.4□□□□□ -1.39
LINC01963-201ENST00000562038 ALAS1P13196 640 aa6.4□□□□□ -1.39
LINC01963-201ENST00000562038 NAPAP54920 295 aa6.4□□□□□ -1.39
LINC01963-201ENST00000562038 KRT76Q01546 638 aa6.4□□□□□ -1.39
LINC01963-201ENST00000562038 PDE4DQ08499 809 aa6.4□□□□□ -1.39
LINC01963-201ENST00000562038 BAATQ14032 418 aaPredicted RBP6.4□□□□□ -1.39
LINC01963-201ENST00000562038 BRDTQ58F21 947 aaPredicted RBP6.4□□□□□ -1.39
LINC01963-201ENST00000562038 METTL7BQ6UX53 244 aa6.4□□□□□ -1.39
LINC01963-201ENST00000562038 CCAR1Q8IX12 1150 aaKnown RBP6.4□□□□□ -1.39
LINC01963-201ENST00000562038 DDX11Q96FC9 970 aa6.4□□□□□ -1.39
LINC01963-201ENST00000562038 TMX3Q96JJ7 454 aa6.4□□□□□ -1.39
LINC01963-201ENST00000562038 TIPINQ9BVW5 301 aa6.4□□□□□ -1.39
LINC01963-201ENST00000562038 WDR11Q9BZH6 1224 aa6.4□□□□□ -1.39
LINC01963-201ENST00000562038 DDX41Q9UJV9 622 aaKnown RBP6.4□□□□□ -1.39
LINC01963-201ENST00000562038 PCDHA6Q9UN73 950 aa6.4□□□□□ -1.39
LINC01963-201ENST00000562038 PCDHA8Q9Y5H6 950 aa6.4□□□□□ -1.39
LINC01963-201ENST00000562038 IGSF9BQ9UPX0 1349 aa6.4□□□□□ -1.39
LINC01963-201ENST00000562038 SMCHD1A6NHR9 2005 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 SMCO2A6NFE2 343 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 NR3C2P08235 984 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 ABCD1P33897 745 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 CDC42EP1Q00587 391 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 NONOQ15233 471 aaKnown RBP eCLIP6.39□□□□□ -1.39
LINC01963-201ENST00000562038 HYIQ5T013 277 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 TRPV1Q8NER1 839 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 FAM167AQ96KS9 214 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 PAGR1Q9BTK6 254 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 KDM4CQ9H3R0 1056 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 SPC25Q9HBM1 224 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 FLRT1Q9NZU1 646 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 TLL1O43897 1013 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 PFKMP08237 780 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 FOSL2P15408 326 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 KCNA2P16389 499 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 CDK7P50613 346 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 FXR2P51116 673 aaKnown RBP eCLIP6.39□□□□□ -1.39
LINC01963-201ENST00000562038 IKQ13123 557 aaPredicted RBP6.39□□□□□ -1.39
LINC01963-201ENST00000562038 TRIM29Q14134 588 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 BECN1Q14457 450 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 SAFBQ15424 915 aaKnown RBP eCLIP6.39□□□□□ -1.39
LINC01963-201ENST00000562038 ZYXQ15942 572 aaKnown RBP6.39□□□□□ -1.39
LINC01963-201ENST00000562038 RILPL1Q5EBL4 403 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 FAM26DQ5JW98 314 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 CELF3Q5SZQ8 465 aaKnown RBP6.39□□□□□ -1.39
LINC01963-201ENST00000562038 CLEC17AQ6ZS10 378 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 RNF180Q86T96 592 aa6.39□□□□□ -1.39
LINC01963-201ENST00000562038 ELOA2Q8IYF1 753 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms