RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 SENP7Q9BQF6 1050 aa26.62■■□□□ 1.85
SMPD3-202ENST00000561749 ZMYND8Q9ULU4 1186 aaPredicted RBP26.62■■□□□ 1.85
SMPD3-202ENST00000561749 GRIN2DO15399 1336 aa26.62■■□□□ 1.85
SMPD3-202ENST00000561749 IGLV3-22A0A075B6J6 115 aa26.61■■□□□ 1.85
SMPD3-202ENST00000561749 FAM205CA6NFA0 338 aa26.61■■□□□ 1.85
SMPD3-202ENST00000561749 PQBP1O60828 265 aaKnown RBP26.61■■□□□ 1.85
SMPD3-202ENST00000561749 MMP1P03956 469 aa26.61■■□□□ 1.85
SMPD3-202ENST00000561749 TLE2Q04725 743 aa26.61■■□□□ 1.85
SMPD3-202ENST00000561749 ITGA7Q13683 1181 aa26.61■■□□□ 1.85
SMPD3-202ENST00000561749 DGKDQ16760 1214 aa26.61■■□□□ 1.85
SMPD3-202ENST00000561749 PRR16Q569H4 304 aa26.61■■□□□ 1.85
SMPD3-202ENST00000561749 AGO4Q9HCK5 861 aaKnown RBP26.61■■□□□ 1.85
SMPD3-202ENST00000561749 BRMS1Q9HCU9 246 aa26.61■■□□□ 1.85
SMPD3-202ENST00000561749 NR2E3Q9Y5X4 410 aa26.61■■□□□ 1.85
SMPD3-202ENST00000561749 H0YGN5 161 aa26.6■■□□□ 1.85
SMPD3-202ENST00000561749 ARVCFO00192 962 aa26.6■■□□□ 1.85
SMPD3-202ENST00000561749 NOP56O00567 594 aaKnown RBP26.6■■□□□ 1.85
SMPD3-202ENST00000561749 KPNA6O60684 536 aa26.6■■□□□ 1.85
SMPD3-202ENST00000561749 SYN1P17600 705 aa26.6■■□□□ 1.85
SMPD3-202ENST00000561749 EARS2Q5JPH6 523 aaKnown RBP26.6■■□□□ 1.85
SMPD3-202ENST00000561749 PIK3AP1Q6ZUJ8 805 aa26.6■■□□□ 1.85
SMPD3-202ENST00000561749 NIPA1Q7RTP0 329 aa26.6■■□□□ 1.85
SMPD3-202ENST00000561749 DIS3L2Q8IYB7 885 aaKnown RBP26.6■■□□□ 1.85
SMPD3-202ENST00000561749 BTBD18B2RXH4 712 aa26.59■■□□□ 1.85
SMPD3-202ENST00000561749 MAFGO15525 162 aa26.59■■□□□ 1.85
SMPD3-202ENST00000561749 CIITAP33076 1130 aa26.59■■□□□ 1.85
SMPD3-202ENST00000561749 C1orf53Q5VUE5 145 aa26.59■■□□□ 1.85
SMPD3-202ENST00000561749 GIMAP8Q8ND71 665 aaPredicted RBP26.59■■□□□ 1.85
SMPD3-202ENST00000561749 GPR20Q99678 358 aa26.59■■□□□ 1.85
SMPD3-202ENST00000561749 DDX39AO00148 427 aaKnown RBP26.58■■□□□ 1.85
SMPD3-202ENST00000561749 TDP2O95551 362 aa26.58■■□□□ 1.85
SMPD3-202ENST00000561749 USP11P51784 963 aa26.58■■□□□ 1.85
SMPD3-202ENST00000561749 ITGB3BPQ13352 177 aaPredicted RBP26.58■■□□□ 1.85
SMPD3-202ENST00000561749 KAT2BQ92831 832 aa26.58■■□□□ 1.85
SMPD3-202ENST00000561749 TNFRSF25Q93038 417 aa26.58■■□□□ 1.85
SMPD3-202ENST00000561749 HOXD8P13378 290 aaPredicted RBP26.57■■□□□ 1.84
SMPD3-202ENST00000561749 CDK7P50613 346 aa26.57■■□□□ 1.84
SMPD3-202ENST00000561749 NBPF20Q3BBV1 942 aa26.57■■□□□ 1.84
SMPD3-202ENST00000561749 FAM47CQ5HY64 1035 aa26.57■■□□□ 1.84
SMPD3-202ENST00000561749 UTP14CQ5TAP6 766 aaKnown RBP26.57■■□□□ 1.84
SMPD3-202ENST00000561749 SDF4Q9BRK5 362 aa26.57■■□□□ 1.84
SMPD3-202ENST00000561749 PRDM5Q9NQX1 630 aaPredicted RBP26.57■■□□□ 1.84
SMPD3-202ENST00000561749 PPFIA4O75335 1185 aa26.56■■□□□ 1.84
SMPD3-202ENST00000561749 GJB2P29033 226 aa26.56■■□□□ 1.84
SMPD3-202ENST00000561749 SETQ01105 290 aaPredicted RBP26.56■■□□□ 1.84
SMPD3-202ENST00000561749 LETM2Q2VYF4 491 aa26.56■■□□□ 1.84
SMPD3-202ENST00000561749 SLC43A3Q8NBI5 491 aa26.56■■□□□ 1.84
SMPD3-202ENST00000561749 LENG9Q96B70 501 aa26.56■■□□□ 1.84
SMPD3-202ENST00000561749 ZNF577Q9BSK1 485 aa26.56■■□□□ 1.84
SMPD3-202ENST00000561749 JPH1Q9HDC5 661 aaPredicted RBP26.56■■□□□ 1.84
SMPD3-202ENST00000561749 LGALS2P05162 132 aa26.55■■□□□ 1.84
SMPD3-202ENST00000561749 PSEN2P49810 448 aa26.55■■□□□ 1.84
SMPD3-202ENST00000561749 SAFBQ15424 915 aaKnown RBP eCLIP26.55■■□□□ 1.84
SMPD3-202ENST00000561749 SH3RF1Q7Z6J0 888 aa26.55■■□□□ 1.84
SMPD3-202ENST00000561749 NEK8Q86SG6 692 aa26.55■■□□□ 1.84
SMPD3-202ENST00000561749 TRIM50Q86XT4 487 aa26.55■■□□□ 1.84
SMPD3-202ENST00000561749 SLC9A2Q9UBY0 812 aa26.55■■□□□ 1.84
SMPD3-202ENST00000561749 SMC3Q9UQE7 1217 aa26.55■■□□□ 1.84
SMPD3-202ENST00000561749 NFASCO94856 1347 aa26.55■■□□□ 1.84
SMPD3-202ENST00000561749 LTBP2Q14767 1821 aa26.55■■□□□ 1.84
SMPD3-202ENST00000561749 GSTTP1A0A1W2PQM5 241 aa26.54■■□□□ 1.84
SMPD3-202ENST00000561749 DCDC2CA8MYV0 355 aa26.54■■□□□ 1.84
SMPD3-202ENST00000561749 IPO5O00410 1097 aaKnown RBP26.54■■□□□ 1.84
SMPD3-202ENST00000561749 F2P00734 622 aa26.54■■□□□ 1.84
SMPD3-202ENST00000561749 TCF7P36402 384 aaPredicted RBP26.54■■□□□ 1.84
SMPD3-202ENST00000561749 MFSD10Q14728 455 aa26.54■■□□□ 1.84
SMPD3-202ENST00000561749 ANKRD33Q7Z3H0 272 aa26.54■■□□□ 1.84
SMPD3-202ENST00000561749 FAM126BQ8IXS8 530 aa26.54■■□□□ 1.84
SMPD3-202ENST00000561749 FBXO18Q8NFZ0 1043 aa26.54■■□□□ 1.84
SMPD3-202ENST00000561749 GJA10Q969M2 543 aa26.54■■□□□ 1.84
SMPD3-202ENST00000561749 C16orf70Q9BSU1 422 aa26.54■■□□□ 1.84
SMPD3-202ENST00000561749 PDLIM7Q9NR12 457 aa26.54■■□□□ 1.84
SMPD3-202ENST00000561749 WDR81Q562E7 1941 aa26.54■■□□□ 1.84
SMPD3-202ENST00000561749 TRIP12Q14669 1992 aaPredicted RBP26.54■■□□□ 1.84
SMPD3-202ENST00000561749 MROH7Q68CQ1 1323 aa26.54■■□□□ 1.84
SMPD3-202ENST00000561749 CLTBP09497 229 aa26.53■■□□□ 1.84
SMPD3-202ENST00000561749 FAAP100Q0VG06 881 aa26.53■■□□□ 1.84
SMPD3-202ENST00000561749 CUL4AQ13619 759 aa26.53■■□□□ 1.84
SMPD3-202ENST00000561749 TRPV6Q9H1D0 765 aa26.53■■□□□ 1.84
SMPD3-202ENST00000561749 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.53■■□□□ 1.84
SMPD3-202ENST00000561749 MSH4O15457 936 aa26.52■■□□□ 1.84
SMPD3-202ENST00000561749 DHX15O43143 795 aaKnown RBP26.52■■□□□ 1.84
SMPD3-202ENST00000561749 KIAA0753Q2KHM9 967 aa26.52■■□□□ 1.84
SMPD3-202ENST00000561749 SEPT1Q8WYJ6 367 aa26.52■■□□□ 1.84
SMPD3-202ENST00000561749 TOX2Q96NM4 488 aa26.52■■□□□ 1.84
SMPD3-202ENST00000561749 KATNAL1Q9BW62 490 aa26.52■■□□□ 1.84
SMPD3-202ENST00000561749 DDX25Q9UHL0 483 aaKnown RBP26.52■■□□□ 1.84
SMPD3-202ENST00000561749 KIF3AQ9Y496 699 aa26.52■■□□□ 1.84
SMPD3-202ENST00000561749 KAT6AQ92794 2004 aa26.51■■□□□ 1.83
SMPD3-202ENST00000561749 CYP3A7-CYP3A51PA0A087WV96 503 aa26.51■■□□□ 1.83
SMPD3-202ENST00000561749 TRIM43BA6NCK2 446 aa26.51■■□□□ 1.83
SMPD3-202ENST00000561749 K7ELQ4 463 aaPredicted RBP26.51■■□□□ 1.83
SMPD3-202ENST00000561749 HAS3O00219 553 aa26.51■■□□□ 1.83
SMPD3-202ENST00000561749 TLR3O15455 904 aaKnown RBP26.51■■□□□ 1.83
SMPD3-202ENST00000561749 SLC37A4O43826 429 aa26.51■■□□□ 1.83
SMPD3-202ENST00000561749 B4GALT4O60513 344 aa26.51■■□□□ 1.83
SMPD3-202ENST00000561749 CCNT1O60563 726 aaKnown RBP26.51■■□□□ 1.83
SMPD3-202ENST00000561749 CCNE2O96020 404 aa26.51■■□□□ 1.83
SMPD3-202ENST00000561749 CYP3A7P24462 503 aa26.51■■□□□ 1.83
SMPD3-202ENST00000561749 ACTR2P61160 394 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms