RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 APOBEC3FQ8IUX4 373 aaKnown RBP11.4□□□□□ -0.58
TUBGCP4-202ENST00000561691 TC2NQ8N9U0 490 aa11.4□□□□□ -0.58
TUBGCP4-202ENST00000561691 PRPF38AQ8NAV1 312 aaKnown RBP11.4□□□□□ -0.58
TUBGCP4-202ENST00000561691 GLIS3Q8NEA6 775 aa11.4□□□□□ -0.58
TUBGCP4-202ENST00000561691 KLRG1Q96E93 195 aa11.4□□□□□ -0.58
TUBGCP4-202ENST00000561691 WNK4Q96J92 1243 aa11.4□□□□□ -0.58
TUBGCP4-202ENST00000561691 FAM20AQ96MK3 541 aa11.4□□□□□ -0.58
TUBGCP4-202ENST00000561691 UBXN6Q9BZV1 441 aa11.4□□□□□ -0.58
TUBGCP4-202ENST00000561691 SPON1Q9HCB6 807 aa11.4□□□□□ -0.58
TUBGCP4-202ENST00000561691 GGA3Q9NZ52 723 aa11.4□□□□□ -0.58
TUBGCP4-202ENST00000561691 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.4□□□□□ -0.58
TUBGCP4-202ENST00000561691 PPP1R9AQ9ULJ8 1098 aa11.4□□□□□ -0.58
TUBGCP4-202ENST00000561691 PCDHA2Q9Y5H9 948 aa11.4□□□□□ -0.58
TUBGCP4-202ENST00000561691 V9GYY5 206 aaPredicted RBP11.4□□□□□ -0.58
TUBGCP4-202ENST00000561691 TRIM66O15016 1216 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 PSMD10O75832 226 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 SLU7O95391 586 aaKnown RBP11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 CCT6AP40227 531 aaKnown RBP11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 SLC12A3P55017 1021 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 DHX8Q14562 1220 aaKnown RBP11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 ARSHQ5FYA8 562 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 TCP11X2Q5H9J9 407 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 TEX35Q5T0J7 233 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 E4F1Q66K89 784 aaPredicted RBP11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 DLK2Q6UY11 383 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 CATSPER3Q86XQ3 398 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 DDX12PQ92771 950 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 SLC5A5Q92911 643 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 DHTKD1Q96HY7 919 aaPredicted RBP11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 C12orf42Q96LP6 360 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 SEMA6BQ9H3T3 888 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 LCMT1Q9UIC8 334 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 FRMPD4Q14CM0 1322 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 FRMD3A2A2Y4 597 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 MEIS1O00470 390 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 CCNE1P24864 410 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 KCNJ6P48051 423 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 BACE1P56817 501 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 PSMC6P62333 389 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 AMPD3Q01432 767 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 SPP2Q13103 211 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 NOL9Q5SY16 702 aaKnown RBP11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 SPECC1LQ69YQ0 1117 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 ANKRD40Q6AI12 368 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 CENPPQ6IPU0 288 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 IL31RAQ8NI17 732 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 FGFBP2Q9BYJ0 223 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 ADAMTS5Q9UNA0 930 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 KIAA1024Q9UPX6 916 aa11.39□□□□□ -0.59
TUBGCP4-202ENST00000561691 KDM3AQ9Y4C1 1321 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 SRCAPQ6ZRS2 3230 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 POTEFA5A3E0 1075 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 ZRANB2O95218 330 aaKnown RBP eCLIP11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 PLA2G4BP0C869 781 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 POTEIP0CG38 1075 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 YBX3P16989 372 aaKnown RBP eCLIP11.38□□□□□ -0.591e-6■■□□□ 12.5
TUBGCP4-202ENST00000561691 CYP11B2P19099 503 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 RPA1P27694 616 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 COPB1P53618 953 aaKnown RBP11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 GYS2P54840 703 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 UBXN2AP68543 259 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 DCAF15Q66K64 600 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 POTEGQ6S5H5 508 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 POTEEQ6S8J3 1075 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 OTOP1Q7RTM1 612 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 DYMQ7RTS9 669 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 C10orf67Q8IYJ2 551 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 ZNF507Q8TCN5 953 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 P2RX5Q93086 422 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 HOOK2Q96ED9 719 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 WRNIP1Q96S55 665 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 HSD17B14Q9BPX1 270 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 RPAP3Q9H6T3 665 aaPredicted RBP11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 RAVER2Q9HCJ3 691 aaKnown RBP11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 EXOC1Q9NV70 894 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 CCPG1Q9ULG6 757 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 PPP2R3BQ9Y5P8 575 aa11.38□□□□□ -0.59
TUBGCP4-202ENST00000561691 KCNJ18B7U540 433 aa11.37□□□□□ -0.59
TUBGCP4-202ENST00000561691 DDNO94850 711 aaPredicted RBP11.37□□□□□ -0.59
TUBGCP4-202ENST00000561691 ARP10275 920 aa11.37□□□□□ -0.59
TUBGCP4-202ENST00000561691 ITGB5P18084 799 aa11.37□□□□□ -0.59
TUBGCP4-202ENST00000561691 SFPQP23246 707 aaKnown RBP eCLIP11.37□□□□□ -0.59
TUBGCP4-202ENST00000561691 KCNJ12Q14500 433 aa11.37□□□□□ -0.59
TUBGCP4-202ENST00000561691 SRLQ86TD4 932 aa11.37□□□□□ -0.59
TUBGCP4-202ENST00000561691 DHX37Q8IY37 1157 aaKnown RBP11.37□□□□□ -0.59
TUBGCP4-202ENST00000561691 CCAR2Q8N163 923 aaKnown RBP11.37□□□□□ -0.59
TUBGCP4-202ENST00000561691 ZNF280CQ8ND82 737 aa11.37□□□□□ -0.59
TUBGCP4-202ENST00000561691 CDK5RAP3Q96JB5 506 aa11.37□□□□□ -0.59
TUBGCP4-202ENST00000561691 NT5C3AQ9H0P0 336 aa11.37□□□□□ -0.59
TUBGCP4-202ENST00000561691 THAP9Q9H5L6 903 aa11.37□□□□□ -0.59
TUBGCP4-202ENST00000561691 SLC39A2Q9NP94 309 aa11.37□□□□□ -0.59
TUBGCP4-202ENST00000561691 BCCIPQ9P287 314 aaKnown RBP eCLIP11.37□□□□□ -0.59
TUBGCP4-202ENST00000561691 ITIH6Q6UXX5 1313 aa11.37□□□□□ -0.59
TUBGCP4-202ENST00000561691 PITPNM2Q9BZ72 1349 aa11.37□□□□□ -0.59
TUBGCP4-202ENST00000561691 NPHP3-ACAD11A0A0J9YXS1 232 aa11.37□□□□□ -0.59
TUBGCP4-202ENST00000561691 RNF225M0QZC1 329 aaPredicted RBP11.37□□□□□ -0.59
TUBGCP4-202ENST00000561691 PSMA7O14818 248 aa11.37□□□□□ -0.59
TUBGCP4-202ENST00000561691 USP2O75604 605 aaPredicted RBP11.37□□□□□ -0.59
TUBGCP4-202ENST00000561691 FECHP22830 423 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms