RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 PGBD1Q96JS3 809 aa17.71■□□□□ 0.43
CCDC113-203ENST00000561517 RNPC3Q96LT9 517 aaKnown RBP17.71■□□□□ 0.43
CCDC113-203ENST00000561517 GPR20Q99678 358 aa17.71■□□□□ 0.43
CCDC113-203ENST00000561517 ALG1Q9BT22 464 aa17.71■□□□□ 0.43
CCDC113-203ENST00000561517 SLC26A6Q9BXS9 759 aa17.71■□□□□ 0.43
CCDC113-203ENST00000561517 IL23AQ9NPF7 189 aa17.71■□□□□ 0.43
CCDC113-203ENST00000561517 HDAC6Q9UBN7 1215 aa17.71■□□□□ 0.43
CCDC113-203ENST00000561517 PITPNM1O00562 1244 aa17.7■□□□□ 0.42
CCDC113-203ENST00000561517 NOP56O00567 594 aaKnown RBP17.7■□□□□ 0.42
CCDC113-203ENST00000561517 ATP9AO75110 1047 aa17.7■□□□□ 0.42
CCDC113-203ENST00000561517 LGALS2P05162 132 aa17.7■□□□□ 0.42
CCDC113-203ENST00000561517 SREBF1P36956 1147 aa17.7■□□□□ 0.42
CCDC113-203ENST00000561517 MTMR1Q13613 665 aa17.7■□□□□ 0.42
CCDC113-203ENST00000561517 PTGISQ16647 500 aa17.7■□□□□ 0.42
CCDC113-203ENST00000561517 RASIP1Q5U651 963 aa17.7■□□□□ 0.42
CCDC113-203ENST00000561517 PSRC1Q6PGN9 363 aaPredicted RBP17.7■□□□□ 0.42
CCDC113-203ENST00000561517 C7orf31Q8N865 590 aa17.7■□□□□ 0.42
CCDC113-203ENST00000561517 VWCEQ96DN2 955 aa17.7■□□□□ 0.42
CCDC113-203ENST00000561517 MXRA8Q9BRK3 442 aa17.7■□□□□ 0.42
CCDC113-203ENST00000561517 LARP6Q9BRS8 491 aaKnown RBP17.7■□□□□ 0.42
CCDC113-203ENST00000561517 C6orf50Q9HD87 102 aa17.7■□□□□ 0.42
CCDC113-203ENST00000561517 TMEM260Q9NX78 707 aa17.7■□□□□ 0.42
CCDC113-203ENST00000561517 H3BRB1 525 aa17.69■□□□□ 0.42
CCDC113-203ENST00000561517 PPFIA3O75145 1194 aa17.69■□□□□ 0.42
CCDC113-203ENST00000561517 ACRP10323 421 aa17.69■□□□□ 0.42
CCDC113-203ENST00000561517 SMAD3P84022 425 aaKnown RBP17.69■□□□□ 0.42
CCDC113-203ENST00000561517 MCTP2Q6DN12 878 aa17.69■□□□□ 0.42
CCDC113-203ENST00000561517 ZNF365Q70YC5 407 aa17.69■□□□□ 0.42
CCDC113-203ENST00000561517 TUT1Q9H6E5 874 aaKnown RBP17.69■□□□□ 0.42
CCDC113-203ENST00000561517 SH3GLB2Q9NR46 395 aa17.69■□□□□ 0.42
CCDC113-203ENST00000561517 NOD1Q9Y239 953 aa17.69■□□□□ 0.42
CCDC113-203ENST00000561517 TELO2Q9Y4R8 837 aa17.69■□□□□ 0.42
CCDC113-203ENST00000561517 LAMA2P24043 3122 aaKnown RBP17.69■□□□□ 0.42
CCDC113-203ENST00000561517 ADAMTS3O15072 1205 aa17.68■□□□□ 0.42
CCDC113-203ENST00000561517 SEC24BO95487 1268 aa17.68■□□□□ 0.42
CCDC113-203ENST00000561517 GNA11P29992 359 aa17.68■□□□□ 0.42
CCDC113-203ENST00000561517 HOXC8P31273 242 aa17.68■□□□□ 0.42
CCDC113-203ENST00000561517 SSRP1Q08945 709 aaKnown RBP17.68■□□□□ 0.42
CCDC113-203ENST00000561517 RBL2Q08999 1139 aa17.68■□□□□ 0.42
CCDC113-203ENST00000561517 BFSP2Q13515 415 aa17.68■□□□□ 0.42
CCDC113-203ENST00000561517 CEP55Q53EZ4 464 aa17.68■□□□□ 0.42
CCDC113-203ENST00000561517 JAKMIP3Q5VZ66 844 aa17.68■□□□□ 0.42
CCDC113-203ENST00000561517 FAM109BQ6ICB4 259 aaPredicted RBP17.68■□□□□ 0.42
CCDC113-203ENST00000561517 TRIM22Q8IYM9 498 aa17.68■□□□□ 0.42
CCDC113-203ENST00000561517 RPUSD2Q8IZ73 545 aaKnown RBP17.68■□□□□ 0.42
CCDC113-203ENST00000561517 CCDC148Q8NFR7 591 aa17.68■□□□□ 0.42
CCDC113-203ENST00000561517 CYP2W1Q8TAV3 490 aa17.68■□□□□ 0.42
CCDC113-203ENST00000561517 CAGE1Q8TC20 777 aa17.68■□□□□ 0.42
CCDC113-203ENST00000561517 CRYGNQ8WXF5 182 aa17.68■□□□□ 0.42
CCDC113-203ENST00000561517 HERVK_113Q902F9 699 aa17.68■□□□□ 0.42
CCDC113-203ENST00000561517 DHX38Q92620 1227 aaKnown RBP17.68■□□□□ 0.42
CCDC113-203ENST00000561517 SCLYQ96I15 445 aa17.68■□□□□ 0.42
CCDC113-203ENST00000561517 KCNH7Q9NS40 1196 aa17.68■□□□□ 0.42
CCDC113-203ENST00000561517 WDR81Q562E7 1941 aa17.67■□□□□ 0.42
CCDC113-203ENST00000561517 MEIS1O00470 390 aa17.67■□□□□ 0.42
CCDC113-203ENST00000561517 CPLX1O14810 134 aa17.67■□□□□ 0.42
CCDC113-203ENST00000561517 CYP3A4P08684 503 aa17.67■□□□□ 0.42
CCDC113-203ENST00000561517 IQCF3P0C7M6 154 aa17.67■□□□□ 0.42
CCDC113-203ENST00000561517 ARHGAP4P98171 946 aa17.67■□□□□ 0.42
CCDC113-203ENST00000561517 STK3Q13188 491 aa17.67■□□□□ 0.42
CCDC113-203ENST00000561517 NIPA1Q7RTP0 329 aa17.67■□□□□ 0.42
CCDC113-203ENST00000561517 REXO1Q8N1G1 1221 aaKnown RBP17.67■□□□□ 0.42
CCDC113-203ENST00000561517 CCDC155Q8N6L0 562 aa17.67■□□□□ 0.42
CCDC113-203ENST00000561517 RETREG2Q8NC44 543 aa17.67■□□□□ 0.42
CCDC113-203ENST00000561517 GBF1Q92538 1859 aa17.67■□□□□ 0.42
CCDC113-203ENST00000561517 MYH9P35579 1960 aaKnown RBP17.66■□□□□ 0.42
CCDC113-203ENST00000561517 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.66■□□□□ 0.42
CCDC113-203ENST00000561517 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.66■□□□□ 0.42
CCDC113-203ENST00000561517 GSTTP1A0A1W2PQM5 241 aa17.66■□□□□ 0.42
CCDC113-203ENST00000561517 DEXIO95424 95 aa17.66■□□□□ 0.42
CCDC113-203ENST00000561517 FGBP02675 491 aa17.66■□□□□ 0.42
CCDC113-203ENST00000561517 PFKMP08237 780 aa17.66■□□□□ 0.42
CCDC113-203ENST00000561517 RFC2P35250 354 aa17.66■□□□□ 0.42
CCDC113-203ENST00000561517 SP4Q02446 784 aa17.66■□□□□ 0.42
CCDC113-203ENST00000561517 SCRN1Q12765 414 aa17.66■□□□□ 0.42
CCDC113-203ENST00000561517 PTK7Q13308 1070 aa17.66■□□□□ 0.42
CCDC113-203ENST00000561517 HIC1Q14526 733 aa17.66■□□□□ 0.42
CCDC113-203ENST00000561517 ANKRD1Q15327 319 aa17.66■□□□□ 0.42
CCDC113-203ENST00000561517 CPLX2Q6PUV4 134 aaKnown RBP17.66■□□□□ 0.42
CCDC113-203ENST00000561517 TRIM50Q86XT4 487 aa17.66■□□□□ 0.42
CCDC113-203ENST00000561517 DEFB123Q8N688 67 aa17.66■□□□□ 0.42
CCDC113-203ENST00000561517 BICD2Q8TD16 824 aa17.66■□□□□ 0.42
CCDC113-203ENST00000561517 AFAP1L1Q8TED9 768 aa17.66■□□□□ 0.42
CCDC113-203ENST00000561517 SEPT1Q8WYJ6 367 aa17.66■□□□□ 0.42
CCDC113-203ENST00000561517 VPS54Q9P1Q0 977 aa17.66■□□□□ 0.42
CCDC113-203ENST00000561517 TPCN1Q9ULQ1 816 aa17.66■□□□□ 0.42
CCDC113-203ENST00000561517 NFASCO94856 1347 aa17.66■□□□□ 0.42
CCDC113-203ENST00000561517 PFKFB2O60825 505 aa17.65■□□□□ 0.42
CCDC113-203ENST00000561517 SMIM10L2AP0DMW4 78 aa17.65■□□□□ 0.42
CCDC113-203ENST00000561517 SMIM10L2BP0DMW5 78 aa17.65■□□□□ 0.42
CCDC113-203ENST00000561517 ARP10275 920 aa17.65■□□□□ 0.42
CCDC113-203ENST00000561517 TCF7P36402 384 aaPredicted RBP17.65■□□□□ 0.42
CCDC113-203ENST00000561517 AK2P54819 239 aa17.65■□□□□ 0.42
CCDC113-203ENST00000561517 ZNF200P98182 395 aaPredicted RBP17.65■□□□□ 0.42
CCDC113-203ENST00000561517 TRIM71Q2Q1W2 868 aaKnown RBP17.65■□□□□ 0.42
CCDC113-203ENST00000561517 Q7L0L9 218 aa17.65■□□□□ 0.42
CCDC113-203ENST00000561517 FAM177A1Q8N128 213 aaPredicted RBP17.65■□□□□ 0.42
CCDC113-203ENST00000561517 SLKQ9H2G2 1235 aaPredicted RBP17.65■□□□□ 0.42
CCDC113-203ENST00000561517 RNPEPQ9H4A4 650 aa17.65■□□□□ 0.42
CCDC113-203ENST00000561517 PKD2L1Q9P0L9 805 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms