RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 TRMT1LQ7Z2T5 733 aaKnown RBP11.53□□□□□ -0.56
HERC1-212ENST00000561348 BLIDQ8IZY5 108 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 PPTC7Q8NI37 304 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 WASF1Q92558 559 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 GPRASP2Q96D09 838 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 CDHR1Q96JP9 859 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 SDF4Q9BRK5 362 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 JADE2Q9NQC1 790 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 SH3GLB2Q9NR46 395 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 KCNH7Q9NS40 1196 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 PCDHA4Q9UN74 947 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 TELO2Q9Y4R8 837 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 UBIAD1Q9Y5Z9 338 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 GRIN2DO15399 1336 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 DNAH12Q6ZR08 3092 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 CCDC194A0A1B0GVG4 234 aa11.52□□□□□ -0.57
HERC1-212ENST00000561348 ESYT2A0FGR8 921 aa11.52□□□□□ -0.57
HERC1-212ENST00000561348 CTDNEP1O95476 244 aa11.52□□□□□ -0.57
HERC1-212ENST00000561348 ITGB8P26012 769 aa11.52□□□□□ -0.57
HERC1-212ENST00000561348 MARK3P27448 753 aa11.52□□□□□ -0.57
HERC1-212ENST00000561348 ICAM3P32942 547 aa11.52□□□□□ -0.57
HERC1-212ENST00000561348 SREBF1P36956 1147 aa11.52□□□□□ -0.57
HERC1-212ENST00000561348 RBM25P49756 843 aaKnown RBP11.52□□□□□ -0.57
HERC1-212ENST00000561348 CLK2P49760 499 aaKnown RBP11.52□□□□□ -0.57
HERC1-212ENST00000561348 CDK7P50613 346 aa11.52□□□□□ -0.57
HERC1-212ENST00000561348 CCL23P55773 120 aa11.52□□□□□ -0.57
HERC1-212ENST00000561348 NKX3-2P78367 333 aa11.52□□□□□ -0.57
HERC1-212ENST00000561348 RABEP1Q15276 862 aa11.52□□□□□ -0.57
HERC1-212ENST00000561348 CEP55Q53EZ4 464 aa11.52□□□□□ -0.57
HERC1-212ENST00000561348 C1orf53Q5VUE5 145 aa11.52□□□□□ -0.57
HERC1-212ENST00000561348 METTL7BQ6UX53 244 aa11.52□□□□□ -0.57
HERC1-212ENST00000561348 ANKRD33Q7Z3H0 272 aa11.52□□□□□ -0.57
HERC1-212ENST00000561348 TRIM50Q86XT4 487 aa11.52□□□□□ -0.57
HERC1-212ENST00000561348 FAM126BQ8IXS8 530 aa11.52□□□□□ -0.57
HERC1-212ENST00000561348 GIMAP8Q8ND71 665 aaPredicted RBP11.52□□□□□ -0.57
HERC1-212ENST00000561348 GLG1Q92896 1179 aa11.52□□□□□ -0.57
HERC1-212ENST00000561348 KIF2CQ99661 725 aa11.52□□□□□ -0.57
HERC1-212ENST00000561348 HIPK3Q9H422 1215 aa11.52□□□□□ -0.57
HERC1-212ENST00000561348 FAM86B1E9PN63 330 aa11.51□□□□□ -0.57
HERC1-212ENST00000561348 MARCH6O60337 910 aa11.51□□□□□ -0.57
HERC1-212ENST00000561348 PPFIA4O75335 1185 aa11.51□□□□□ -0.57
HERC1-212ENST00000561348 LGALS2P05162 132 aa11.51□□□□□ -0.57
HERC1-212ENST00000561348 FAM86B2P0C5J1 330 aa11.51□□□□□ -0.57
HERC1-212ENST00000561348 KCNA2P16389 499 aa11.51□□□□□ -0.57
HERC1-212ENST00000561348 TCF7P36402 384 aaPredicted RBP11.51□□□□□ -0.57
HERC1-212ENST00000561348 PTGISQ16647 500 aa11.51□□□□□ -0.57
HERC1-212ENST00000561348 HABP4Q5JVS0 413 aaKnown RBP11.51□□□□□ -0.57
HERC1-212ENST00000561348 MCTP2Q6DN12 878 aa11.51□□□□□ -0.57
HERC1-212ENST00000561348 FAM184AQ8NB25 1140 aa11.51□□□□□ -0.57
HERC1-212ENST00000561348 NSUN7Q8NE18 718 aaKnown RBP11.51□□□□□ -0.57
HERC1-212ENST00000561348 TBCKQ8TEA7 893 aa11.51□□□□□ -0.57
HERC1-212ENST00000561348 KAT2BQ92831 832 aa11.51□□□□□ -0.57
HERC1-212ENST00000561348 EMID1Q96A84 441 aaPredicted RBP11.51□□□□□ -0.57
HERC1-212ENST00000561348 ZSCAN31Q96LW9 406 aaPredicted RBP11.51□□□□□ -0.57
HERC1-212ENST00000561348 TOX2Q96NM4 488 aa11.51□□□□□ -0.57
HERC1-212ENST00000561348 GPR20Q99678 358 aa11.51□□□□□ -0.57
HERC1-212ENST00000561348 ZNF577Q9BSK1 485 aa11.51□□□□□ -0.57
HERC1-212ENST00000561348 KATNAL1Q9BW62 490 aa11.51□□□□□ -0.57
HERC1-212ENST00000561348 BRMS1Q9HCU9 246 aa11.51□□□□□ -0.57
HERC1-212ENST00000561348 JPH1Q9HDC5 661 aaPredicted RBP11.51□□□□□ -0.57
HERC1-212ENST00000561348 HDAC6Q9UBN7 1215 aa11.51□□□□□ -0.57
HERC1-212ENST00000561348 SLC9A2Q9UBY0 812 aa11.51□□□□□ -0.57
HERC1-212ENST00000561348 H3BRB1 525 aa11.5□□□□□ -0.57
HERC1-212ENST00000561348 BACH1O14867 736 aa11.5□□□□□ -0.57
HERC1-212ENST00000561348 KIAA0355O15063 1070 aa11.5□□□□□ -0.57
HERC1-212ENST00000561348 CHMP2AO43633 222 aa11.5□□□□□ -0.57
HERC1-212ENST00000561348 TIMP1P01033 207 aa11.5□□□□□ -0.57
HERC1-212ENST00000561348 SUPT20HL2P0C7V6 817 aa11.5□□□□□ -0.57
HERC1-212ENST00000561348 ACRP10323 421 aa11.5□□□□□ -0.57
HERC1-212ENST00000561348 FDPSP14324 419 aaKnown RBP11.5□□□□□ -0.57
HERC1-212ENST00000561348 ATP2B1P20020 1258 aa11.5□□□□□ -0.57
HERC1-212ENST00000561348 IGBP1P78318 339 aa11.5□□□□□ -0.57
HERC1-212ENST00000561348 ZNF200P98182 395 aaPredicted RBP11.5□□□□□ -0.57
HERC1-212ENST00000561348 FPGSQ05932 587 aa11.5□□□□□ -0.57
HERC1-212ENST00000561348 GNL2Q13823 731 aaKnown RBP11.5□□□□□ -0.57
HERC1-212ENST00000561348 NONOQ15233 471 aaKnown RBP eCLIP11.5□□□□□ -0.57
HERC1-212ENST00000561348 INF2Q27J81 1249 aa11.5□□□□□ -0.57
HERC1-212ENST00000561348 LETM2Q2VYF4 491 aa11.5□□□□□ -0.57
HERC1-212ENST00000561348 GDF6Q6KF10 455 aaPredicted RBP11.5□□□□□ -0.57
HERC1-212ENST00000561348 PIK3AP1Q6ZUJ8 805 aa11.5□□□□□ -0.57
HERC1-212ENST00000561348 RETREG2Q8NC44 543 aa11.5□□□□□ -0.57
HERC1-212ENST00000561348 OXER1Q8TDS5 423 aa11.5□□□□□ -0.57
HERC1-212ENST00000561348 SEPT1Q8WYJ6 367 aa11.5□□□□□ -0.57
HERC1-212ENST00000561348 GDF15Q99988 308 aa11.5□□□□□ -0.57
HERC1-212ENST00000561348 SENP7Q9BQF6 1050 aa11.5□□□□□ -0.57
HERC1-212ENST00000561348 TUT1Q9H6E5 874 aaKnown RBP11.5□□□□□ -0.57
HERC1-212ENST00000561348 AGO4Q9HCK5 861 aaKnown RBP11.5□□□□□ -0.57
HERC1-212ENST00000561348 ZNF215Q9UL58 517 aaPredicted RBP11.5□□□□□ -0.57
HERC1-212ENST00000561348 SAMM50Q9Y512 469 aa11.5□□□□□ -0.57
HERC1-212ENST00000561348 UMODL1Q5DID0 1318 aa11.5□□□□□ -0.57
HERC1-212ENST00000561348 STK36Q9NRP7 1315 aa11.5□□□□□ -0.57
HERC1-212ENST00000561348 IPO5O00410 1097 aaKnown RBP11.49□□□□□ -0.57
HERC1-212ENST00000561348 MAFGO15525 162 aa11.49□□□□□ -0.57
HERC1-212ENST00000561348 CD4P01730 458 aa11.49□□□□□ -0.57
HERC1-212ENST00000561348 CSF2RAP15509 400 aa11.49□□□□□ -0.57
HERC1-212ENST00000561348 KRT2P35908 639 aa11.49□□□□□ -0.57
HERC1-212ENST00000561348 NFRKBQ6P4R8 1299 aa11.49□□□□□ -0.57
HERC1-212ENST00000561348 KRT25Q7Z3Z0 450 aa11.49□□□□□ -0.57
HERC1-212ENST00000561348 DEFB128Q7Z7B8 93 aa11.49□□□□□ -0.57
HERC1-212ENST00000561348 TMEM199Q8N511 208 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms