RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 PAGE5Q96GU1 130 aa11.56□□□□□ -0.56
USP3-219ENST00000561326 ZFP91Q96JP5 570 aaPredicted RBP11.56□□□□□ -0.56
USP3-219ENST00000561326 INPP4AQ96PE3 977 aaPredicted RBP11.56□□□□□ -0.56
USP3-219ENST00000561326 PURBQ96QR8 312 aaKnown RBP11.56□□□□□ -0.56
USP3-219ENST00000561326 UIMC1Q96RL1 719 aa11.56□□□□□ -0.56
USP3-219ENST00000561326 MMTAG2Q9BU76 263 aaKnown RBP11.56□□□□□ -0.56
USP3-219ENST00000561326 POLR3CQ9BUI4 534 aaPredicted RBP11.56□□□□□ -0.56
USP3-219ENST00000561326 NAT10Q9H0A0 1025 aaKnown RBP11.56□□□□□ -0.56
USP3-219ENST00000561326 DOCK5Q9H7D0 1870 aa11.56□□□□□ -0.56
USP3-219ENST00000561326 EFCC1Q9HA90 598 aa11.56□□□□□ -0.56
USP3-219ENST00000561326 ANO10Q9NW15 660 aa11.56□□□□□ -0.56
USP3-219ENST00000561326 MGAMO43451 1857 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 DNAJC25-GNG10A0A024R161 153 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.55□□□□□ -0.56
USP3-219ENST00000561326 IGF2BP3O00425 579 aaKnown RBP eCLIP11.55□□□□□ -0.56
USP3-219ENST00000561326 TLR2O60603 784 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 TGFB3P10600 412 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 RPA1P27694 616 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 MRE11P49959 708 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 KRT76Q01546 638 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 SPIRE1Q08AE8 756 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 GRB10Q13322 594 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 PNOCQ13519 176 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 EPHA7Q15375 998 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 PDXDC2PQ6P474 469 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 SH3RF1Q7Z6J0 888 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 PLEKHH3Q7Z736 793 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 DPP9Q86TI2 863 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 ZNF784Q8NCA9 323 aaPredicted RBP11.55□□□□□ -0.56
USP3-219ENST00000561326 GIMAP8Q8ND71 665 aaPredicted RBP11.55□□□□□ -0.56
USP3-219ENST00000561326 NEK9Q8TD19 979 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 GJA10Q969M2 543 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 GSDMAQ96QA5 445 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 PLIN2Q99541 437 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 GTPBP4Q9BZE4 634 aaKnown RBP11.55□□□□□ -0.56
USP3-219ENST00000561326 PORCNQ9H237 461 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 TUFT1Q9NNX1 390 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 CREBZFQ9NS37 354 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 BMP2KQ9NSY1 1161 aaPredicted RBP11.55□□□□□ -0.56
USP3-219ENST00000561326 RMND1Q9NWS8 449 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 TUBE1Q9UJT0 475 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 VAV3Q9UKW4 847 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 DNM3Q9UQ16 869 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 PCDHA5Q9Y5H7 936 aa11.55□□□□□ -0.56
USP3-219ENST00000561326 SOWAHBA6NEL2 793 aa11.54□□□□□ -0.56
USP3-219ENST00000561326 SLC15A5A6NIM6 579 aa11.54□□□□□ -0.56
USP3-219ENST00000561326 SPATA31C2B4DYI2 1134 aa11.54□□□□□ -0.56
USP3-219ENST00000561326 GTPBP6O43824 516 aaPredicted RBP11.54□□□□□ -0.56
USP3-219ENST00000561326 PGK2P07205 417 aa11.54□□□□□ -0.56
USP3-219ENST00000561326 SFNP31947 248 aa11.54□□□□□ -0.56
USP3-219ENST00000561326 ICAM3P32942 547 aa11.54□□□□□ -0.56
USP3-219ENST00000561326 APLP1P51693 650 aa11.54□□□□□ -0.56
USP3-219ENST00000561326 NLRP12P59046 1061 aa11.54□□□□□ -0.56
USP3-219ENST00000561326 GRM1Q13255 1194 aa11.54□□□□□ -0.56
USP3-219ENST00000561326 MIER3Q7Z3K6 550 aa11.54□□□□□ -0.56
USP3-219ENST00000561326 ZNF467Q7Z7K2 595 aaPredicted RBP11.54□□□□□ -0.56
USP3-219ENST00000561326 TRIML1Q8N9V2 468 aa11.54□□□□□ -0.56
USP3-219ENST00000561326 RDM1Q8NG50 284 aa11.54□□□□□ -0.56
USP3-219ENST00000561326 EIF2AK1Q9BQI3 630 aaKnown RBP11.54□□□□□ -0.56
USP3-219ENST00000561326 FUCA2Q9BTY2 467 aa11.54□□□□□ -0.56
USP3-219ENST00000561326 KBTBD4Q9NVX7 518 aa11.54□□□□□ -0.56
USP3-219ENST00000561326 CPA4Q9UI42 421 aa11.54□□□□□ -0.56
USP3-219ENST00000561326 KIAA1024Q9UPX6 916 aa11.54□□□□□ -0.56
USP3-219ENST00000561326 DIS3Q9Y2L1 958 aaKnown RBP11.54□□□□□ -0.56
USP3-219ENST00000561326 SAMM50Q9Y512 469 aa11.54□□□□□ -0.56
USP3-219ENST00000561326 NFASCO94856 1347 aa11.54□□□□□ -0.56
USP3-219ENST00000561326 FSD2A1L4K1 749 aa11.53□□□□□ -0.56
USP3-219ENST00000561326 DHX15O43143 795 aaKnown RBP11.53□□□□□ -0.56
USP3-219ENST00000561326 CA12O43570 354 aa11.53□□□□□ -0.56
USP3-219ENST00000561326 DKC1O60832 514 aaKnown RBP eCLIP11.53□□□□□ -0.56
USP3-219ENST00000561326 EDNRBP24530 442 aa11.53□□□□□ -0.56
USP3-219ENST00000561326 ADORA2AP29274 412 aa11.53□□□□□ -0.56
USP3-219ENST00000561326 SARSP49591 514 aaKnown RBP11.53□□□□□ -0.56
USP3-219ENST00000561326 JAK3P52333 1124 aa11.53□□□□□ -0.56
USP3-219ENST00000561326 DPYDQ12882 1025 aa11.53□□□□□ -0.56
USP3-219ENST00000561326 TMEM119Q4V9L6 283 aa11.53□□□□□ -0.56
USP3-219ENST00000561326 NT5DC1Q5TFE4 455 aa11.53□□□□□ -0.56
USP3-219ENST00000561326 CYP4F22Q6NT55 531 aa11.53□□□□□ -0.56
USP3-219ENST00000561326 ZNF746Q6NUN9 644 aaPredicted RBP11.53□□□□□ -0.56
USP3-219ENST00000561326 C17orf99Q6UX52 265 aa11.53□□□□□ -0.56
USP3-219ENST00000561326 GPR142Q7Z601 462 aa11.53□□□□□ -0.56
USP3-219ENST00000561326 GAS2L3Q86XJ1 694 aa11.53□□□□□ -0.56
USP3-219ENST00000561326 CATSPER3Q86XQ3 398 aa11.53□□□□□ -0.56
USP3-219ENST00000561326 TPH2Q8IWU9 490 aa11.53□□□□□ -0.56
USP3-219ENST00000561326 SPATA20Q8TB22 786 aa11.53□□□□□ -0.56
USP3-219ENST00000561326 LARP4BQ92615 738 aaKnown RBP11.53□□□□□ -0.56
USP3-219ENST00000561326 ANP32BQ92688 251 aaKnown RBP11.53□□□□□ -0.56
USP3-219ENST00000561326 RAD54LQ92698 747 aa11.53□□□□□ -0.56
USP3-219ENST00000561326 PNMA5Q96PV4 448 aa11.53□□□□□ -0.56
USP3-219ENST00000561326 C7orf25Q9BPX7 421 aa11.53□□□□□ -0.56
USP3-219ENST00000561326 SENP7Q9BQF6 1050 aa11.53□□□□□ -0.56
USP3-219ENST00000561326 PKD2L1Q9P0L9 805 aa11.53□□□□□ -0.56
USP3-219ENST00000561326 DACH1Q9UI36 760 aa11.53□□□□□ -0.56
USP3-219ENST00000561326 RASSF10A6NK89 507 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 WDR64B1ANS9 1081 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 EML1O00423 815 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 BIN1O00499 593 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 FOXN1O15353 648 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 CHMP2AO43633 222 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 P4HBP07237 508 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms