RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 MAFGO15525 162 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 OAZ1P54368 228 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 TMEM62Q0P6H9 643 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 ADALQ6DHV7 355 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 IQSEC1Q6DN90 963 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 AFG1LQ8WV93 481 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 FERMT1Q9BQL6 677 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 SSTR3P32745 418 aaPredicted RBP10.68□□□□□ -0.7
TRPM1-212ENST00000560801 PRAMEF19Q5SWL8 479 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 RFX7Q2KHR2 1363 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 MEIS1O00470 390 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 CTTNQ14247 550 aaKnown RBP10.68□□□□□ -0.7
TRPM1-212ENST00000560801 LONRF3Q496Y0 759 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 NELFCDQ8IXH7 590 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 GMCL1Q96IK5 515 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.68□□□□□ -0.7
TRPM1-212ENST00000560801 ZSWIM6Q9HCJ5 1215 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 DACT1Q9NYF0 836 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 MACROD2A1Z1Q3 448 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 STAM2O75886 525 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 GJB1P08034 283 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 KRT5P13647 590 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 QARSP47897 775 aaKnown RBP10.68□□□□□ -0.7
TRPM1-212ENST00000560801 CXCL17Q6UXB2 119 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 RIOX2Q8IUF8 465 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 YAF2Q8IY57 180 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 CACTINQ8WUQ7 758 aaKnown RBP10.68□□□□□ -0.7
TRPM1-212ENST00000560801 ZMYND15Q9H091 742 aa10.68□□□□□ -0.7
TRPM1-212ENST00000560801 DDX19AQ9NUU7 478 aaKnown RBP10.68□□□□□ -0.7
TRPM1-212ENST00000560801 EGFRP00533 1210 aa10.67□□□□□ -0.7
TRPM1-212ENST00000560801 AMHP03971 560 aa10.67□□□□□ -0.7
TRPM1-212ENST00000560801 KCNA3P22001 575 aa10.67□□□□□ -0.7
TRPM1-212ENST00000560801 ABCD1P33897 745 aa10.67□□□□□ -0.7
TRPM1-212ENST00000560801 ALDH7A1P49419 539 aaKnown RBP10.67□□□□□ -0.7
TRPM1-212ENST00000560801 LACTBP83111 547 aaPredicted RBP10.67□□□□□ -0.7
TRPM1-212ENST00000560801 LIN9Q5TKA1 542 aa10.67□□□□□ -0.7
TRPM1-212ENST00000560801 CYB5R4Q7L1T6 521 aa10.67□□□□□ -0.7
TRPM1-212ENST00000560801 FAM43AQ8N2R8 423 aa10.67□□□□□ -0.7
TRPM1-212ENST00000560801 TBC1D32Q96NH3 1257 aa10.67□□□□□ -0.7
TRPM1-212ENST00000560801 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.67□□□□□ -0.7
TRPM1-212ENST00000560801 DTNBO60941 627 aa10.67□□□□□ -0.7
TRPM1-212ENST00000560801 NPM3O75607 178 aaKnown RBP10.67□□□□□ -0.7
TRPM1-212ENST00000560801 PTPREP23469 700 aa10.67□□□□□ -0.7
TRPM1-212ENST00000560801 TRAPPC10P48553 1259 aa10.67□□□□□ -0.7
TRPM1-212ENST00000560801 PRELPP51888 382 aa10.67□□□□□ -0.7
TRPM1-212ENST00000560801 HIRAP54198 1017 aaPredicted RBP10.67□□□□□ -0.7
TRPM1-212ENST00000560801 PSMC5P62195 406 aa10.67□□□□□ -0.7
TRPM1-212ENST00000560801 TREML2Q5T2D2 321 aa10.67□□□□□ -0.7
TRPM1-212ENST00000560801 FAM20AQ96MK3 541 aa10.67□□□□□ -0.7
TRPM1-212ENST00000560801 SPZ1Q9BXG8 430 aa10.67□□□□□ -0.7
TRPM1-212ENST00000560801 HOXA2O43364 376 aa10.67□□□□□ -0.7
TRPM1-212ENST00000560801 HBP1O60381 514 aa10.67□□□□□ -0.7
TRPM1-212ENST00000560801 CTNNA2P26232 953 aa10.67□□□□□ -0.7
TRPM1-212ENST00000560801 YWHAEP62258 255 aaKnown RBP10.67□□□□□ -0.7
TRPM1-212ENST00000560801 SPECC1Q5M775 1068 aa10.67□□□□□ -0.7
TRPM1-212ENST00000560801 GMCL1P1Q8NEA9 526 aa10.67□□□□□ -0.7
TRPM1-212ENST00000560801 RNPC3Q96LT9 517 aaKnown RBP10.67□□□□□ -0.7
TRPM1-212ENST00000560801 TRAPPC3O43617 180 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 P4HBP07237 508 aaKnown RBP10.66□□□□□ -0.7
TRPM1-212ENST00000560801 CCL23P55773 120 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 RHBDL3P58872 404 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 BEX3Q00994 111 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 PTGDRQ13258 359 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 ADCK5Q3MIX3 580 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 RASEFQ8IZ41 740 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 BANK1Q8NDB2 785 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 C7orf43Q8WVR3 580 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 EPB41L4AQ9HCS5 686 aaPredicted RBP10.66□□□□□ -0.7
TRPM1-212ENST00000560801 SH3GLB2Q9NR46 395 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 FAM50BQ9Y247 325 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 LTN1O94822 1766 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 PHLPP2Q6ZVD8 1323 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 F13A1P00488 732 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 CCL5P13501 91 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 IKBKEQ14164 716 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 ATL3Q6DD88 541 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 DNERQ8NFT8 737 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 MTRQ99707 1265 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 C2orf40Q9H1Z8 148 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 TSHZ2Q9NRE2 1034 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 PTCH2Q9Y6C5 1203 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 RPTORQ8N122 1335 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 LAD1O00515 517 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 DLATP10515 647 aaKnown RBP10.66□□□□□ -0.7
TRPM1-212ENST00000560801 PPP1R2P41236 205 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 CYP2J2P51589 502 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 TNNC1P63316 161 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 PFKFB3Q16875 520 aaPredicted RBP10.66□□□□□ -0.7
TRPM1-212ENST00000560801 RSRC2Q7L4I2 434 aaKnown RBP10.66□□□□□ -0.7
TRPM1-212ENST00000560801 RPF1Q9H9Y2 349 aaKnown RBP10.66□□□□□ -0.7
TRPM1-212ENST00000560801 SNCAIPQ9Y6H5 919 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 SLC4A7Q9Y6M7 1214 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 ANXA13P27216 316 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 BTG3Q14201 252 aaPredicted RBP10.66□□□□□ -0.7
TRPM1-212ENST00000560801 ME3Q16798 604 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 KIAA0753Q2KHM9 967 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 ADGRA1Q86SQ6 560 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 CCDC127Q96BQ5 260 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 IFIH1Q9BYX4 1025 aaKnown RBP10.66□□□□□ -0.7
TRPM1-212ENST00000560801 SNX25Q9H3E2 840 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms