RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 SCG2P13521 617 aa17.61■□□□□ 0.41
PBX1-219ENST00000560641 CNNM4Q6P4Q7 775 aa17.61■□□□□ 0.41
PBX1-219ENST00000560641 SPATA5Q8NB90 893 aa17.61■□□□□ 0.41
PBX1-219ENST00000560641 CCDC26Q8TAB7 109 aa17.61■□□□□ 0.41
PBX1-219ENST00000560641 PCMTD1Q96MG8 357 aaPredicted RBP17.61■□□□□ 0.41
PBX1-219ENST00000560641 PSMB7Q99436 277 aa17.61■□□□□ 0.41
PBX1-219ENST00000560641 SART1O43290 800 aaKnown RBP17.61■□□□□ 0.41
PBX1-219ENST00000560641 SSBP05455 408 aaKnown RBP eCLIP17.61■□□□□ 0.41
PBX1-219ENST00000560641 MCM7P33993 719 aa17.61■□□□□ 0.41
PBX1-219ENST00000560641 GCKP35557 465 aa17.61■□□□□ 0.41
PBX1-219ENST00000560641 PHKA1P46020 1223 aa17.61■□□□□ 0.41
PBX1-219ENST00000560641 GFPT1Q06210 699 aaPredicted RBP17.61■□□□□ 0.41
PBX1-219ENST00000560641 PIK3AP1Q6ZUJ8 805 aa17.61■□□□□ 0.41
PBX1-219ENST00000560641 TEX9Q8N6V9 391 aa17.61■□□□□ 0.41
PBX1-219ENST00000560641 SPDL1Q96EA4 605 aa17.61■□□□□ 0.41
PBX1-219ENST00000560641 COL1A1P02452 1464 aaPredicted RBP17.61■□□□□ 0.41
PBX1-219ENST00000560641 USP11P51784 963 aa17.6■□□□□ 0.41
PBX1-219ENST00000560641 PPP1R7Q15435 360 aa17.6■□□□□ 0.41
PBX1-219ENST00000560641 SLC18A3Q16572 532 aa17.6■□□□□ 0.41
PBX1-219ENST00000560641 CAPRIN2Q6IMN6 1127 aaKnown RBP17.6■□□□□ 0.41
PBX1-219ENST00000560641 DTHD1Q6ZMT9 781 aa17.6■□□□□ 0.41
PBX1-219ENST00000560641 MAGEB6Q8N7X4 407 aa17.6■□□□□ 0.41
PBX1-219ENST00000560641 SEMA6BQ9H3T3 888 aa17.6■□□□□ 0.41
PBX1-219ENST00000560641 CABP4P57796 275 aa17.6■□□□□ 0.41
PBX1-219ENST00000560641 LRRC63Q05C16 580 aa17.6■□□□□ 0.41
PBX1-219ENST00000560641 MYO1EQ12965 1108 aa17.6■□□□□ 0.41
PBX1-219ENST00000560641 SLC9C1Q4G0N8 1177 aa17.6■□□□□ 0.41
PBX1-219ENST00000560641 AP1ARQ63HQ0 302 aa17.6■□□□□ 0.41
PBX1-219ENST00000560641 FBXL5Q9UKA1 691 aa17.6■□□□□ 0.41
PBX1-219ENST00000560641 TTC7AQ9ULT0 858 aaPredicted RBP17.6■□□□□ 0.41
PBX1-219ENST00000560641 NOVA2Q9UNW9 492 aaKnown RBP17.6■□□□□ 0.41
PBX1-219ENST00000560641 TULP1O00294 542 aaPredicted RBP17.6■□□□□ 0.41
PBX1-219ENST00000560641 MAGOHP61326 146 aaKnown RBP17.6■□□□□ 0.41
PBX1-219ENST00000560641 LRRC15Q8TF66 581 aa17.6■□□□□ 0.41
PBX1-219ENST00000560641 MAGOHBQ96A72 148 aaKnown RBP17.6■□□□□ 0.41
PBX1-219ENST00000560641 NEUROG2Q9H2A3 272 aa17.6■□□□□ 0.41
PBX1-219ENST00000560641 FAM114A2Q9NRY5 505 aa17.6■□□□□ 0.41
PBX1-219ENST00000560641 KIF13AQ9H1H9 1805 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 PHF20L1A8MW92 1017 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 PECAM1P16284 738 aaPredicted RBP17.59■□□□□ 0.41
PBX1-219ENST00000560641 BIRC2Q13490 618 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 PUM3Q15397 648 aaKnown RBP17.59■□□□□ 0.41
PBX1-219ENST00000560641 RRAGAQ7L523 313 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 CROCCP2Q86T23 111 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 LCORLQ8N3X6 602 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 GBP7Q8N8V2 638 aaPredicted RBP17.59■□□□□ 0.41
PBX1-219ENST00000560641 MICAL1Q8TDZ2 1067 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 TMEM109Q9BVC6 243 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 BAIAP2L1Q9UHR4 511 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 SLC4A4Q9Y6R1 1079 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 RPSAP08865 295 aaKnown RBP17.59■□□□□ 0.41
PBX1-219ENST00000560641 NQO1P15559 274 aaKnown RBP17.59■□□□□ 0.41
PBX1-219ENST00000560641 STK4Q13043 487 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 TNFAIP8L3Q5GJ75 292 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 TRPM8Q7Z2W7 1104 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 HOOK3Q86VS8 718 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 ANKS1AQ92625 1134 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 SHANK3Q9BYB0 1731 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 MROH5Q6ZUA9 1318 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 GOLGA6L10A0A0M3HER8 536 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 SNUPNO95149 360 aaKnown RBP17.59■□□□□ 0.41
PBX1-219ENST00000560641 GALNT17Q6IS24 598 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 LDHAL6AQ6ZMR3 332 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 KIAA0895Q8NCT3 520 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 AGAP11Q8TF27 550 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 ADAM7Q9H2U9 754 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 ATP6V0A2Q9Y487 856 aa17.59■□□□□ 0.41
PBX1-219ENST00000560641 CACNA1SQ13698 1873 aa17.58■□□□□ 0.41
PBX1-219ENST00000560641 BUB1O43683 1085 aa17.58■□□□□ 0.41
PBX1-219ENST00000560641 LRRC57Q8N9N7 239 aa17.58■□□□□ 0.41
PBX1-219ENST00000560641 AIPL1Q9NZN9 384 aa17.58■□□□□ 0.41
PBX1-219ENST00000560641 TLR2O60603 784 aa17.58■□□□□ 0.4
PBX1-219ENST00000560641 KIF4AO95239 1232 aa17.58■□□□□ 0.4
PBX1-219ENST00000560641 KLRC1P26715 233 aa17.58■□□□□ 0.4
PBX1-219ENST00000560641 ANXA13P27216 316 aa17.58■□□□□ 0.4
PBX1-219ENST00000560641 PDE4DQ08499 809 aa17.58■□□□□ 0.4
PBX1-219ENST00000560641 PROM2Q8N271 834 aa17.58■□□□□ 0.4
PBX1-219ENST00000560641 SRBD1Q8N5C6 995 aaKnown RBP17.58■□□□□ 0.4
PBX1-219ENST00000560641 OR2W6PQ8NHA6 318 aa17.58■□□□□ 0.4
PBX1-219ENST00000560641 ZBTB3Q9H5J0 574 aa17.58■□□□□ 0.4
PBX1-219ENST00000560641 PVALEFA0A1B0GWK0 134 aa17.57■□□□□ 0.4
PBX1-219ENST00000560641 PRKAB2O43741 272 aa17.57■□□□□ 0.4
PBX1-219ENST00000560641 NT5C2P49902 561 aa17.57■□□□□ 0.4
PBX1-219ENST00000560641 POU5F1Q01860 360 aaKnown RBP17.57■□□□□ 0.4
PBX1-219ENST00000560641 IFIT1BQ5T764 474 aaKnown RBP17.57■□□□□ 0.4
PBX1-219ENST00000560641 LRRC55Q6ZSA7 311 aa17.57■□□□□ 0.4
PBX1-219ENST00000560641 BLIDQ8IZY5 108 aa17.57■□□□□ 0.4
PBX1-219ENST00000560641 GUF1Q8N442 669 aaKnown RBP17.57■□□□□ 0.4
PBX1-219ENST00000560641 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.57■□□□□ 0.4
PBX1-219ENST00000560641 PCDHA4Q9UN74 947 aa17.57■□□□□ 0.4
PBX1-219ENST00000560641 NKRFO15226 690 aaKnown RBP eCLIP17.57■□□□□ 0.4
PBX1-219ENST00000560641 SLC5A1P13866 664 aa17.57■□□□□ 0.4
PBX1-219ENST00000560641 ITGA6P23229 1130 aa17.57■□□□□ 0.4
PBX1-219ENST00000560641 AMPD3Q01432 767 aa17.57■□□□□ 0.4
PBX1-219ENST00000560641 RBBP5Q15291 538 aaKnown RBP17.57■□□□□ 0.4
PBX1-219ENST00000560641 CCDC38Q502W7 563 aa17.57■□□□□ 0.4
PBX1-219ENST00000560641 SLFN11Q7Z7L1 901 aa17.57■□□□□ 0.4
PBX1-219ENST00000560641 CFAP61Q8NHU2 1237 aa17.57■□□□□ 0.4
PBX1-219ENST00000560641 KIF9Q9HAQ2 790 aa17.57■□□□□ 0.4
PBX1-219ENST00000560641 ARHGEF3Q9NR81 526 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms