RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 TMC6Q7Z403 805 aa5.73□□□□□ -1.49
TMOD3-207ENST00000560549 TRIM59Q8IWR1 403 aa5.73□□□□□ -1.49
TMOD3-207ENST00000560549 FAM178BQ8IXR5 827 aa5.73□□□□□ -1.49
TMOD3-207ENST00000560549 BVESQ8NE79 360 aa5.73□□□□□ -1.49
TMOD3-207ENST00000560549 PANK1Q8TE04 598 aa5.73□□□□□ -1.49
TMOD3-207ENST00000560549 COPS5Q92905 334 aa5.73□□□□□ -1.49
TMOD3-207ENST00000560549 MKL1Q969V6 931 aa5.73□□□□□ -1.49
TMOD3-207ENST00000560549 TRIM55Q9BYV6 548 aa5.73□□□□□ -1.49
TMOD3-207ENST00000560549 GPRC5CQ9NQ84 441 aa5.73□□□□□ -1.49
TMOD3-207ENST00000560549 SIRPGQ9P1W8 387 aa5.73□□□□□ -1.49
TMOD3-207ENST00000560549 PREX1Q8TCU6 1659 aa5.72□□□□□ -1.49
TMOD3-207ENST00000560549 NRXN1Q9ULB1 1477 aa5.72□□□□□ -1.49
TMOD3-207ENST00000560549 N4BP3O15049 544 aa5.72□□□□□ -1.49
TMOD3-207ENST00000560549 L1CAMP32004 1257 aa5.72□□□□□ -1.49
TMOD3-207ENST00000560549 TMF1P82094 1093 aa5.72□□□□□ -1.49
TMOD3-207ENST00000560549 NCAPHQ15003 741 aa5.72□□□□□ -1.49
TMOD3-207ENST00000560549 GTF2IRD2BQ6EKJ0 949 aa5.72□□□□□ -1.49
TMOD3-207ENST00000560549 GTF2IRD2Q86UP8 949 aa5.72□□□□□ -1.49
TMOD3-207ENST00000560549 JAMLQ86YT9 394 aa5.72□□□□□ -1.49
TMOD3-207ENST00000560549 CERS3Q8IU89 383 aa5.72□□□□□ -1.49
TMOD3-207ENST00000560549 IGDCC3Q8IVU1 814 aa5.72□□□□□ -1.49
TMOD3-207ENST00000560549 TMEFF1Q8IYR6 380 aa5.72□□□□□ -1.49
TMOD3-207ENST00000560549 DEPDC7Q96QD5 511 aa5.72□□□□□ -1.49
TMOD3-207ENST00000560549 RXFP1Q9HBX9 757 aa5.72□□□□□ -1.49
TMOD3-207ENST00000560549 CNOT6Q9ULM6 557 aaKnown RBP5.72□□□□□ -1.49
TMOD3-207ENST00000560549 RWDD3Q9Y3V2 267 aa5.72□□□□□ -1.49
TMOD3-207ENST00000560549 CEP152O94986 1710 aa5.72□□□□□ -1.49
TMOD3-207ENST00000560549 NEURL4Q96JN8 1562 aa5.72□□□□□ -1.49
TMOD3-207ENST00000560549 MYOM2P54296 1465 aa5.72□□□□□ -1.49
TMOD3-207ENST00000560549 SCAF11Q99590 1463 aaKnown RBP5.72□□□□□ -1.49
TMOD3-207ENST00000560549 PARD3Q8TEW0 1356 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 MYBBP1AQ9BQG0 1328 aaKnown RBP5.71□□□□□ -1.49
TMOD3-207ENST00000560549 SRGAP3O43295 1099 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 SUSD5O60279 629 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 TBC1D8O95759 1140 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 MPOP05164 745 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 THBDP07204 575 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 FBLN1P23142 703 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 ARL4AP40617 200 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 ZNF143P52747 638 aaPredicted RBP5.71□□□□□ -1.49
TMOD3-207ENST00000560549 NCKAP1LP55160 1127 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 IDI1Q13907 227 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 RALBP1Q15311 655 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 SF1Q15637 639 aaKnown RBP5.71□□□□□ -1.49
TMOD3-207ENST00000560549 CC2D1BQ5T0F9 858 aaKnown RBP5.71□□□□□ -1.49
TMOD3-207ENST00000560549 TMEM132EQ6IEE7 984 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 ZNF227Q86WZ6 799 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 NLGN2Q8NFZ4 835 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 BTN2A2Q8WVV5 523 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 SIGLEC10Q96LC7 697 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 APBA2Q99767 749 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 MTA3Q9BTC8 594 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 IRF2BPLQ9H1B7 796 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 C14orf93Q9H972 538 aaKnown RBP5.71□□□□□ -1.49
TMOD3-207ENST00000560549 KANSL2Q9H9L4 492 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 PDLIM7Q9NR12 457 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 CLEC1BQ9P126 229 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 GULP1Q9UBP9 304 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 TMEFF2Q9UIK5 374 aaPredicted RBP5.71□□□□□ -1.49
TMOD3-207ENST00000560549 KCTD3Q9Y597 815 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 PCDHA5Q9Y5H7 936 aa5.71□□□□□ -1.49
TMOD3-207ENST00000560549 ADGRB3O60242 1522 aa5.71□□□□□ -1.5
TMOD3-207ENST00000560549 LRPPRCP42704 1394 aaKnown RBP5.71□□□□□ -1.5
TMOD3-207ENST00000560549 TLDC2A0PJX2 215 aa5.71□□□□□ -1.5
TMOD3-207ENST00000560549 C7orf72A4D263 438 aa5.71□□□□□ -1.5
TMOD3-207ENST00000560549 CAPNS1P04632 268 aa5.71□□□□□ -1.5
TMOD3-207ENST00000560549 ITGAVP06756 1048 aa5.71□□□□□ -1.5
TMOD3-207ENST00000560549 GLI4P10075 376 aa5.71□□□□□ -1.5
TMOD3-207ENST00000560549 PLS3P13797 630 aa5.71□□□□□ -1.5
TMOD3-207ENST00000560549 PI3P19957 117 aa5.71□□□□□ -1.5
TMOD3-207ENST00000560549 SEPHS1P49903 392 aa5.71□□□□□ -1.5
TMOD3-207ENST00000560549 CORO7P57737 925 aa5.71□□□□□ -1.5
TMOD3-207ENST00000560549 IRX6P78412 446 aaPredicted RBP5.71□□□□□ -1.5
TMOD3-207ENST00000560549 ZNF200P98182 395 aaPredicted RBP5.71□□□□□ -1.5
TMOD3-207ENST00000560549 INF2Q27J81 1249 aa5.71□□□□□ -1.5
TMOD3-207ENST00000560549 ZNF385BQ569K4 471 aa5.71□□□□□ -1.5
TMOD3-207ENST00000560549 OLFML2BQ68BL8 750 aa5.71□□□□□ -1.5
TMOD3-207ENST00000560549 LDHDQ86WU2 507 aa5.71□□□□□ -1.5
TMOD3-207ENST00000560549 CCDC103Q8IW40 242 aa5.71□□□□□ -1.5
TMOD3-207ENST00000560549 FRS2Q8WU20 508 aa5.71□□□□□ -1.5
TMOD3-207ENST00000560549 PPP1R14AQ96A00 147 aa5.71□□□□□ -1.5
TMOD3-207ENST00000560549 DACT3Q96B18 629 aaPredicted RBP5.71□□□□□ -1.5
TMOD3-207ENST00000560549 NKX2-4Q9H2Z4 354 aa5.71□□□□□ -1.5
TMOD3-207ENST00000560549 SIRT5Q9NXA8 310 aa5.71□□□□□ -1.5
TMOD3-207ENST00000560549 CFAP65Q6ZU64 1925 aaKnown RBP5.7□□□□□ -1.5
TMOD3-207ENST00000560549 BRD4O60885 1362 aaPredicted RBP5.7□□□□□ -1.5
TMOD3-207ENST00000560549 IQGAP1P46940 1657 aa5.7□□□□□ -1.5
TMOD3-207ENST00000560549 ZBED9Q6R2W3 1325 aa5.7□□□□□ -1.5
TMOD3-207ENST00000560549 IRS2Q9Y4H2 1338 aa5.7□□□□□ -1.5
TMOD3-207ENST00000560549 CAMSAP1Q5T5Y3 1602 aa5.7□□□□□ -1.5
TMOD3-207ENST00000560549 LTBP4Q8N2S1 1624 aa5.7□□□□□ -1.5
TMOD3-207ENST00000560549 CCDC85CA6NKD9 419 aa5.7□□□□□ -1.5
TMOD3-207ENST00000560549 DDAH1O94760 285 aa5.7□□□□□ -1.5
TMOD3-207ENST00000560549 FXNQ16595 210 aa5.7□□□□□ -1.5
TMOD3-207ENST00000560549 PRSS53Q2L4Q9 553 aa5.7□□□□□ -1.5
TMOD3-207ENST00000560549 BICRALQ6AI39 1079 aa5.7□□□□□ -1.5
TMOD3-207ENST00000560549 NPLOC4Q8TAT6 608 aa5.7□□□□□ -1.5
TMOD3-207ENST00000560549 DPF3Q92784 378 aa5.7□□□□□ -1.5
TMOD3-207ENST00000560549 SRPK1Q96SB4 655 aaKnown RBP5.7□□□□□ -1.5
TMOD3-207ENST00000560549 CCDC113Q9H0I3 377 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms