RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 ADCY7P51828 1080 aa9.18□□□□□ -0.94
LRRC28-219ENST00000560483 BEX3Q00994 111 aa9.18□□□□□ -0.94
LRRC28-219ENST00000560483 SSRP1Q08945 709 aaKnown RBP9.18□□□□□ -0.94
LRRC28-219ENST00000560483 TOB2Q14106 344 aaPredicted RBP9.18□□□□□ -0.94
LRRC28-219ENST00000560483 TTLL4Q14679 1199 aa9.18□□□□□ -0.94
LRRC28-219ENST00000560483 LRRC41Q15345 812 aa9.18□□□□□ -0.94
LRRC28-219ENST00000560483 UBE2SQ16763 222 aa9.18□□□□□ -0.94
LRRC28-219ENST00000560483 SLC35G1Q2M3R5 365 aa9.18□□□□□ -0.94
LRRC28-219ENST00000560483 IQSEC1Q6DN90 963 aa9.18□□□□□ -0.94
LRRC28-219ENST00000560483 USP17L6PQ6QN14 398 aa9.18□□□□□ -0.94
LRRC28-219ENST00000560483 RDH13Q8NBN7 331 aa9.18□□□□□ -0.94
LRRC28-219ENST00000560483 OR6J1Q8NGC5 347 aa9.18□□□□□ -0.94
LRRC28-219ENST00000560483 SCFD2Q8WU76 684 aa9.18□□□□□ -0.94
LRRC28-219ENST00000560483 CCDC12Q8WUD4 166 aaPredicted RBP9.18□□□□□ -0.94
LRRC28-219ENST00000560483 C22orf23Q9BZE7 217 aa9.18□□□□□ -0.94
LRRC28-219ENST00000560483 PRDM5Q9NQX1 630 aaPredicted RBP9.18□□□□□ -0.94
LRRC28-219ENST00000560483 PXMP2Q9NR77 195 aa9.18□□□□□ -0.94
LRRC28-219ENST00000560483 SYNRGQ9UMZ2 1314 aa9.18□□□□□ -0.94
LRRC28-219ENST00000560483 ATP11BQ9Y2G3 1177 aa9.18□□□□□ -0.94
LRRC28-219ENST00000560483 MRVI1Q9Y6F6 885 aa9.18□□□□□ -0.94
LRRC28-219ENST00000560483 LCTP09848 1927 aa9.17□□□□□ -0.94
LRRC28-219ENST00000560483 ASTN1O14525 1302 aa9.17□□□□□ -0.94
LRRC28-219ENST00000560483 LOC102724159A0A0B4J2E5 919 aa9.17□□□□□ -0.94
LRRC28-219ENST00000560483 SMCO2A6NFE2 343 aa9.17□□□□□ -0.94
LRRC28-219ENST00000560483 DDX11L8A8MPP1 907 aa9.17□□□□□ -0.94
LRRC28-219ENST00000560483 J3QL48 77 aa9.17□□□□□ -0.94
LRRC28-219ENST00000560483 WIPF1O43516 503 aa9.17□□□□□ -0.94
LRRC28-219ENST00000560483 CDKL5O76039 1030 aa9.17□□□□□ -0.94
LRRC28-219ENST00000560483 NR3C2P08235 984 aa9.17□□□□□ -0.94
LRRC28-219ENST00000560483 MYL3P08590 195 aa9.17□□□□□ -0.94
LRRC28-219ENST00000560483 PDIA3P30101 505 aaKnown RBP9.17□□□□□ -0.94
LRRC28-219ENST00000560483 ZNF76P36508 570 aa9.17□□□□□ -0.94
LRRC28-219ENST00000560483 SMCPP49901 116 aaPredicted RBP9.17□□□□□ -0.94
LRRC28-219ENST00000560483 HSD17B4P51659 736 aa9.17□□□□□ -0.94
LRRC28-219ENST00000560483 RCAN1P53805 252 aa9.17□□□□□ -0.94
LRRC28-219ENST00000560483 AK2P54819 239 aa9.17□□□□□ -0.94
LRRC28-219ENST00000560483 PWP2Q15269 919 aaKnown RBP9.17□□□□□ -0.94
LRRC28-219ENST00000560483 C8orf34Q49A92 452 aa9.17□□□□□ -0.94
LRRC28-219ENST00000560483 WWC2Q6AWC2 1192 aa9.17□□□□□ -0.94
LRRC28-219ENST00000560483 PCSK9Q8NBP7 692 aaKnown RBP9.17□□□□□ -0.94
LRRC28-219ENST00000560483 GLT1D1Q96MS3 346 aa9.17□□□□□ -0.94
LRRC28-219ENST00000560483 IWS1Q96ST2 819 aa9.17□□□□□ -0.94
LRRC28-219ENST00000560483 STARD7Q9NQZ5 370 aa9.17□□□□□ -0.94
LRRC28-219ENST00000560483 MAP3K20Q9NYL2 800 aaKnown RBP9.17□□□□□ -0.94
LRRC28-219ENST00000560483 RTEL1Q9NZ71 1219 aa9.17□□□□□ -0.94
LRRC28-219ENST00000560483 COL20A1Q9P218 1284 aa9.17□□□□□ -0.94
LRRC28-219ENST00000560483 hCG_1984214I3L0E3 225 aa9.16□□□□□ -0.94
LRRC28-219ENST00000560483 PQBP1O60828 265 aaKnown RBP9.16□□□□□ -0.94
LRRC28-219ENST00000560483 EIF3JO75822 258 aaKnown RBP9.16□□□□□ -0.94
LRRC28-219ENST00000560483 SCG2P13521 617 aa9.16□□□□□ -0.94
LRRC28-219ENST00000560483 CPT1AP50416 773 aa9.16□□□□□ -0.94
LRRC28-219ENST00000560483 PGM5Q15124 567 aa9.16□□□□□ -0.94
LRRC28-219ENST00000560483 KCNA10Q16322 511 aa9.16□□□□□ -0.94
LRRC28-219ENST00000560483 FSCN1Q16658 493 aaKnown RBP9.16□□□□□ -0.94
LRRC28-219ENST00000560483 GNPTABQ3T906 1256 aa9.16□□□□□ -0.94
LRRC28-219ENST00000560483 SAMD3Q8N6K7 520 aa9.16□□□□□ -0.94
LRRC28-219ENST00000560483 ZNF713Q8N859 430 aaPredicted RBP9.16□□□□□ -0.94
LRRC28-219ENST00000560483 CCDC148Q8NFR7 591 aa9.16□□□□□ -0.94
LRRC28-219ENST00000560483 ZNF274Q96GC6 653 aaPredicted RBP9.16□□□□□ -0.94
LRRC28-219ENST00000560483 MAF1Q9H063 256 aa9.16□□□□□ -0.94
LRRC28-219ENST00000560483 C6orf50Q9HD87 102 aa9.16□□□□□ -0.94
LRRC28-219ENST00000560483 ATP13A2Q9NQ11 1180 aa9.16□□□□□ -0.94
LRRC28-219ENST00000560483 ZMYND8Q9ULU4 1186 aaPredicted RBP9.16□□□□□ -0.94
LRRC28-219ENST00000560483 MYH7BA7E2Y1 1941 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 DNAH12Q6ZR08 3092 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 A0A1W2PQ45 241 aaPredicted RBP9.15□□□□□ -0.94
LRRC28-219ENST00000560483 A0A1W2PQY0 241 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 MYADML2A6NDP7 307 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 STXBP3O00186 592 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 NOP56O00567 594 aaKnown RBP9.15□□□□□ -0.94
LRRC28-219ENST00000560483 OPLAHO14841 1288 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 NKRFO15226 690 aaKnown RBP eCLIP9.15□□□□□ -0.94
LRRC28-219ENST00000560483 PRPF3O43395 683 aaKnown RBP9.15□□□□□ -0.94
LRRC28-219ENST00000560483 ASGR1P07306 291 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 SYN1P17600 705 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 XBP1P17861 261 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 PTGS1P23219 599 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 GNA11P29992 359 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 ACLYP53396 1101 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 RTP1P59025 263 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 NLRP5P59047 1200 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 SP4Q02446 784 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 PFKFB3Q16875 520 aaPredicted RBP9.15□□□□□ -0.94
LRRC28-219ENST00000560483 LY6KQ17RY6 165 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 DUSP28Q4G0W2 176 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 FAM47CQ5HY64 1035 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 JAKMIP3Q5VZ66 844 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 TAPT1Q6NXT6 567 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 BRICD5Q6PL45 260 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 NLRX1Q86UT6 975 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 DHX37Q8IY37 1157 aaKnown RBP9.15□□□□□ -0.94
LRRC28-219ENST00000560483 COPS5Q92905 334 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 PGBD1Q96JS3 809 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 PDCD2LQ9BRP1 358 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 RNF26Q9BY78 433 aaPredicted RBP9.15□□□□□ -0.94
LRRC28-219ENST00000560483 GLT8D2Q9H1C3 349 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 MLXIPQ9HAP2 919 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 BARHL2Q9NY43 387 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 VPS54Q9P1Q0 977 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 TPCN1Q9ULQ1 816 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms