RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 TOX2Q96NM4 488 aa15.88■□□□□ 0.13
PKNOX1-209ENST00000560448 TCEAL9Q9UHQ7 104 aa15.88■□□□□ 0.13
PKNOX1-209ENST00000560448 SMC3Q9UQE7 1217 aa15.88■□□□□ 0.13
PKNOX1-209ENST00000560448 NR2E3Q9Y5X4 410 aa15.88■□□□□ 0.13
PKNOX1-209ENST00000560448 FAM86B1E9PN63 330 aa15.87■□□□□ 0.13
PKNOX1-209ENST00000560448 FAM86B2P0C5J1 330 aa15.87■□□□□ 0.13
PKNOX1-209ENST00000560448 PDCP20941 246 aa15.87■□□□□ 0.13
PKNOX1-209ENST00000560448 BEX3Q00994 111 aa15.87■□□□□ 0.13
PKNOX1-209ENST00000560448 SP2Q02086 613 aa15.87■□□□□ 0.13
PKNOX1-209ENST00000560448 PTPN11Q06124 597 aaPredicted RBP15.87■□□□□ 0.13
PKNOX1-209ENST00000560448 PLA2G4DQ86XP0 818 aa15.87■□□□□ 0.13
PKNOX1-209ENST00000560448 COPS5Q92905 334 aa15.87■□□□□ 0.13
PKNOX1-209ENST00000560448 TNFRSF25Q93038 417 aa15.87■□□□□ 0.13
PKNOX1-209ENST00000560448 AGO4Q9HCK5 861 aaKnown RBP15.87■□□□□ 0.13
PKNOX1-209ENST00000560448 JPH1Q9HDC5 661 aaPredicted RBP15.87■□□□□ 0.13
PKNOX1-209ENST00000560448 CHMP5Q9NZZ3 219 aa15.87■□□□□ 0.13
PKNOX1-209ENST00000560448 EVI5O60447 810 aa15.86■□□□□ 0.13
PKNOX1-209ENST00000560448 ORC2Q13416 577 aaPredicted RBP15.86■□□□□ 0.13
PKNOX1-209ENST00000560448 NFKBIBQ15653 356 aa15.86■□□□□ 0.13
PKNOX1-209ENST00000560448 HSDL1Q3SXM5 330 aa15.86■□□□□ 0.13
PKNOX1-209ENST00000560448 TMEM63BQ5T3F8 832 aa15.86■□□□□ 0.13
PKNOX1-209ENST00000560448 NFRKBQ6P4R8 1299 aa15.86■□□□□ 0.13
PKNOX1-209ENST00000560448 CYFIP1Q7L576 1253 aa15.86■□□□□ 0.13
PKNOX1-209ENST00000560448 ANKRD33Q7Z3H0 272 aa15.86■□□□□ 0.13
PKNOX1-209ENST00000560448 MBOAT7Q96N66 472 aa15.86■□□□□ 0.13
PKNOX1-209ENST00000560448 CIZ1Q9ULV3 898 aaPredicted RBP15.86■□□□□ 0.13
PKNOX1-209ENST00000560448 ARVCFO00192 962 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 IPO5O00410 1097 aaKnown RBP15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 TBX3O15119 743 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 F2P00734 622 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 GJB2P29033 226 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 TRAPPC10P48553 1259 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 NBR1Q14596 966 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 PRR16Q569H4 304 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 CXCL17Q6UXB2 119 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 PIK3AP1Q6ZUJ8 805 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 SLC43A3Q8NBI5 491 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 SEPT1Q8WYJ6 367 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 DPF3Q92784 378 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 TNPO1Q92973 898 aaKnown RBP15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 VTI1AQ96AJ9 217 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 ZFP91Q96JP5 570 aaPredicted RBP15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 RIT2Q99578 217 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 ZNF577Q9BSK1 485 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 GJB4Q9NTQ9 266 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 SLC9A2Q9UBY0 812 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 ZNF215Q9UL58 517 aaPredicted RBP15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 MKI67P46013 3256 aaKnown RBP15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 SCN10AQ9Y5Y9 1956 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 BTBD18B2RXH4 712 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 ADAMTS3O15072 1205 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 ATP9AO75110 1047 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 MYL3P08590 195 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 ARP10275 920 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 CDK7P50613 346 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 KRT76Q01546 638 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 ITGA7Q13683 1181 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 GNL2Q13823 731 aaKnown RBP15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 INF2Q27J81 1249 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 SESTD1Q86VW0 696 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 SMAP1Q8IYB5 467 aaPredicted RBP15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 CYP2W1Q8TAV3 490 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 OXER1Q8TDS5 423 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 FERMT2Q96AC1 680 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 GPR20Q99678 358 aa15.85■□□□□ 0.13
PKNOX1-209ENST00000560448 DCDC2CA8MYV0 355 aa15.84■□□□□ 0.13
PKNOX1-209ENST00000560448 H3BQV1 296 aa15.84■□□□□ 0.13
PKNOX1-209ENST00000560448 TLR3O15455 904 aaKnown RBP15.84■□□□□ 0.13
PKNOX1-209ENST00000560448 SUPT20HL2P0C7V6 817 aa15.84■□□□□ 0.13
PKNOX1-209ENST00000560448 U2AF2P26368 475 aaKnown RBP eCLIP15.84■□□□□ 0.13
PKNOX1-209ENST00000560448 SLC26A2P50443 739 aa15.84■□□□□ 0.13
PKNOX1-209ENST00000560448 RTP1P59025 263 aa15.84■□□□□ 0.13
PKNOX1-209ENST00000560448 NR5A1Q13285 461 aa15.84■□□□□ 0.13
PKNOX1-209ENST00000560448 LRRC26Q2I0M4 334 aa15.84■□□□□ 0.13
PKNOX1-209ENST00000560448 LETM2Q2VYF4 491 aa15.84■□□□□ 0.13
PKNOX1-209ENST00000560448 ZNF746Q6NUN9 644 aaPredicted RBP15.84■□□□□ 0.13
PKNOX1-209ENST00000560448 NOSTRINQ8IVI9 506 aa15.84■□□□□ 0.13
PKNOX1-209ENST00000560448 LENG9Q96B70 501 aa15.84■□□□□ 0.13
PKNOX1-209ENST00000560448 FAM20AQ96MK3 541 aa15.84■□□□□ 0.13
PKNOX1-209ENST00000560448 DDX25Q9UHL0 483 aaKnown RBP15.84■□□□□ 0.13
PKNOX1-209ENST00000560448 EMSYQ7Z589 1322 aa15.83■□□□□ 0.13
PKNOX1-209ENST00000560448 ATN1P54259 1190 aaPredicted RBP15.83■□□□□ 0.12
PKNOX1-209ENST00000560448 IRX5P78411 483 aaPredicted RBP15.83■□□□□ 0.12
PKNOX1-209ENST00000560448 SLFN12Q8IYM2 578 aa15.83■□□□□ 0.12
PKNOX1-209ENST00000560448 RDM1Q8NG50 284 aa15.83■□□□□ 0.12
PKNOX1-209ENST00000560448 PRKAG2Q9UGJ0 569 aa15.83■□□□□ 0.12
PKNOX1-209ENST00000560448 NOL7Q9UMY1 257 aaKnown RBP15.83■□□□□ 0.12
PKNOX1-209ENST00000560448 H3BRB1 525 aa15.82■□□□□ 0.12
PKNOX1-209ENST00000560448 HAS3O00219 553 aa15.82■□□□□ 0.12
PKNOX1-209ENST00000560448 CCNT1O60563 726 aaKnown RBP15.82■□□□□ 0.12
PKNOX1-209ENST00000560448 ATG7O95352 703 aa15.82■□□□□ 0.12
PKNOX1-209ENST00000560448 LGALS2P05162 132 aa15.82■□□□□ 0.12
PKNOX1-209ENST00000560448 PTGS1P23219 599 aa15.82■□□□□ 0.12
PKNOX1-209ENST00000560448 SFNP31947 248 aa15.82■□□□□ 0.12
PKNOX1-209ENST00000560448 ITGB3BPQ13352 177 aaPredicted RBP15.82■□□□□ 0.12
PKNOX1-209ENST00000560448 LARP1BQ659C4 914 aaKnown RBP15.82■□□□□ 0.12
PKNOX1-209ENST00000560448 SLC5A5Q92911 643 aa15.82■□□□□ 0.12
PKNOX1-209ENST00000560448 C16orf70Q9BSU1 422 aa15.82■□□□□ 0.12
PKNOX1-209ENST00000560448 SMARCAD1Q9H4L7 1026 aa15.82■□□□□ 0.12
PKNOX1-209ENST00000560448 TUT1Q9H6E5 874 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms