RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 KCNH7Q9NS40 1196 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 FOXD4L1Q9NU39 408 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 TMEM39AQ9NV64 488 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 PRKAG2Q9UGJ0 569 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 ELP1O95163 1332 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 STK36Q9NRP7 1315 aa9.74□□□□□ -0.85
USP3-217ENST00000560070 COL11A1P12107 1806 aaPredicted RBP9.73□□□□□ -0.85
USP3-217ENST00000560070 MGAMO43451 1857 aa9.73□□□□□ -0.85
USP3-217ENST00000560070 CCDC194A0A1B0GVG4 234 aa9.73□□□□□ -0.85
USP3-217ENST00000560070 FAM205CA6NFA0 338 aa9.73□□□□□ -0.85
USP3-217ENST00000560070 BTBD18B2RXH4 712 aa9.73□□□□□ -0.85
USP3-217ENST00000560070 RBAK-RBAKDNI3L0D1 243 aa9.73□□□□□ -0.85
USP3-217ENST00000560070 KPNA6O60684 536 aa9.73□□□□□ -0.85
USP3-217ENST00000560070 PPFIA4O75335 1185 aa9.73□□□□□ -0.85
USP3-217ENST00000560070 CYP3A4P08684 503 aa9.73□□□□□ -0.85
USP3-217ENST00000560070 KCNA2P16389 499 aa9.73□□□□□ -0.85
USP3-217ENST00000560070 KRT2P35908 639 aa9.73□□□□□ -0.85
USP3-217ENST00000560070 PSEN2P49810 448 aa9.73□□□□□ -0.85
USP3-217ENST00000560070 ZNF200P98182 395 aaPredicted RBP9.73□□□□□ -0.85
USP3-217ENST00000560070 FAAP100Q0VG06 881 aa9.73□□□□□ -0.85
USP3-217ENST00000560070 NONOQ15233 471 aaKnown RBP eCLIP9.73□□□□□ -0.85
USP3-217ENST00000560070 LETM2Q2VYF4 491 aa9.73□□□□□ -0.85
USP3-217ENST00000560070 TRMT1LQ7Z2T5 733 aaKnown RBP9.73□□□□□ -0.85
USP3-217ENST00000560070 KAT2BQ92831 832 aa9.73□□□□□ -0.85
USP3-217ENST00000560070 CDHR1Q96JP9 859 aa9.73□□□□□ -0.85
USP3-217ENST00000560070 C8orf76Q96K31 380 aa9.73□□□□□ -0.85
USP3-217ENST00000560070 GPR20Q99678 358 aa9.73□□□□□ -0.85
USP3-217ENST00000560070 SDF4Q9BRK5 362 aa9.73□□□□□ -0.85
USP3-217ENST00000560070 LLPHQ9BRT6 129 aaKnown RBP9.73□□□□□ -0.85
USP3-217ENST00000560070 ZNF577Q9BSK1 485 aa9.73□□□□□ -0.85
USP3-217ENST00000560070 DOCK3Q8IZD9 2030 aa9.73□□□□□ -0.85
USP3-217ENST00000560070 GSTTP1A0A1W2PQM5 241 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 M0R2N6 131 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 TLR3O15455 904 aaKnown RBP9.72□□□□□ -0.85
USP3-217ENST00000560070 MAFGO15525 162 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 TDP2O95551 362 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 CLTBP09497 229 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 CYP2C9P11712 490 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 MARK3P27448 753 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 ITGB3BPQ13352 177 aaPredicted RBP9.72□□□□□ -0.85
USP3-217ENST00000560070 GNL2Q13823 731 aaKnown RBP9.72□□□□□ -0.85
USP3-217ENST00000560070 MFSD10Q14728 455 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 KIAA0753Q2KHM9 967 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 PRPF38BQ5VTL8 546 aaKnown RBP9.72□□□□□ -0.85
USP3-217ENST00000560070 GALNT17Q6IS24 598 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 METTL7BQ6UX53 244 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 KRT25Q7Z3Z0 450 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 TRIM50Q86XT4 487 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 DIS3L2Q8IYB7 885 aaKnown RBP9.72□□□□□ -0.85
USP3-217ENST00000560070 C7orf31Q8N865 590 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 SLC43A3Q8NBI5 491 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 DAGLBQ8NCG7 672 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 GIMAP8Q8ND71 665 aaPredicted RBP9.72□□□□□ -0.85
USP3-217ENST00000560070 SEPT1Q8WYJ6 367 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 BADQ92934 168 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 EMID1Q96A84 441 aaPredicted RBP9.72□□□□□ -0.85
USP3-217ENST00000560070 LBHD1Q9BQE6 289 aaPredicted RBP9.72□□□□□ -0.85
USP3-217ENST00000560070 SENP7Q9BQF6 1050 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 PPP1R12CQ9BZL4 782 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 BRMS1Q9HCU9 246 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 TRMT13Q9NUP7 481 aaKnown RBP9.72□□□□□ -0.85
USP3-217ENST00000560070 HDAC6Q9UBN7 1215 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 COLQQ9Y215 455 aaPredicted RBP9.72□□□□□ -0.85
USP3-217ENST00000560070 NOD1Q9Y239 953 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 ZNF236Q9UL36 1845 aa9.72□□□□□ -0.85
USP3-217ENST00000560070 IGLV3-22A0A075B6J6 115 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 IPO5O00410 1097 aaKnown RBP9.71□□□□□ -0.86
USP3-217ENST00000560070 MARCH6O60337 910 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 B4GALT4O60513 344 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 CCNT1O60563 726 aaKnown RBP9.71□□□□□ -0.86
USP3-217ENST00000560070 MMP1P03956 469 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 LGALS2P05162 132 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 RAG1P15918 1043 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 ITGB8P26012 769 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 GJB2P29033 226 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 TCF7P36402 384 aaPredicted RBP9.71□□□□□ -0.86
USP3-217ENST00000560070 MAGEA10P43363 369 aaPredicted RBP9.71□□□□□ -0.86
USP3-217ENST00000560070 MCM2P49736 904 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 USP11P51784 963 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 CCL23P55773 120 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 ACTR2P61160 394 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 HMGN5P82970 282 aaKnown RBP9.71□□□□□ -0.86
USP3-217ENST00000560070 SNX17Q15036 470 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 SAFBQ15424 915 aaKnown RBP eCLIP9.71□□□□□ -0.86
USP3-217ENST00000560070 C1orf53Q5VUE5 145 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 GDF6Q6KF10 455 aaPredicted RBP9.71□□□□□ -0.86
USP3-217ENST00000560070 ANKRD33Q7Z3H0 272 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 SPRYD3Q8NCJ5 442 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 CRYGNQ8WXF5 182 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 GLG1Q92896 1179 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 C16orf70Q9BSU1 422 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 RNPEPQ9H4A4 650 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 JPH1Q9HDC5 661 aaPredicted RBP9.71□□□□□ -0.86
USP3-217ENST00000560070 PDLIM7Q9NR12 457 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 SLC9A2Q9UBY0 812 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 SMC3Q9UQE7 1217 aa9.71□□□□□ -0.86
USP3-217ENST00000560070 PARP14Q460N5 1801 aa9.7□□□□□ -0.86
USP3-217ENST00000560070 H3BRB1 525 aa9.7□□□□□ -0.86
USP3-217ENST00000560070 BACH1O14867 736 aa9.7□□□□□ -0.86
USP3-217ENST00000560070 MSH4O15457 936 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms