RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 ASB14A6NK59 587 aa13.7□□□□□ -0.22
HERC1-205ENST00000559886 ATP9AO75110 1047 aa13.7□□□□□ -0.22
HERC1-205ENST00000559886 HTRA3P83110 453 aa13.7□□□□□ -0.22
HERC1-205ENST00000559886 MORN1Q5T089 497 aa13.7□□□□□ -0.22
HERC1-205ENST00000559886 RRAGBQ5VZM2 374 aa13.7□□□□□ -0.22
HERC1-205ENST00000559886 NCAPH2Q6IBW4 605 aa13.7□□□□□ -0.22
HERC1-205ENST00000559886 SNX29Q8TEQ0 813 aa13.7□□□□□ -0.22
HERC1-205ENST00000559886 CALML4Q96GE6 196 aa13.7□□□□□ -0.22
HERC1-205ENST00000559886 NUDT12Q9BQG2 462 aa13.7□□□□□ -0.22
HERC1-205ENST00000559886 STK24Q9Y6E0 443 aa13.7□□□□□ -0.22
HERC1-205ENST00000559886 SYCE3A1L190 88 aa13.7□□□□□ -0.22
HERC1-205ENST00000559886 GRB10Q13322 594 aa13.7□□□□□ -0.22
HERC1-205ENST00000559886 HYIQ5T013 277 aa13.7□□□□□ -0.22
HERC1-205ENST00000559886 KANK3Q6NY19 840 aa13.7□□□□□ -0.22
HERC1-205ENST00000559886 DPP9Q86TI2 863 aa13.7□□□□□ -0.22
HERC1-205ENST00000559886 RASSF8Q8NHQ8 419 aa13.7□□□□□ -0.22
HERC1-205ENST00000559886 CFHR5Q9BXR6 569 aa13.7□□□□□ -0.22
HERC1-205ENST00000559886 UNC45AQ9H3U1 944 aa13.7□□□□□ -0.22
HERC1-205ENST00000559886 PKD2L1Q9P0L9 805 aa13.7□□□□□ -0.22
HERC1-205ENST00000559886 EML1O00423 815 aa13.69□□□□□ -0.22
HERC1-205ENST00000559886 KCNA2P16389 499 aa13.69□□□□□ -0.22
HERC1-205ENST00000559886 PLCG1P19174 1290 aa13.69□□□□□ -0.22
HERC1-205ENST00000559886 STAT6P42226 847 aa13.69□□□□□ -0.22
HERC1-205ENST00000559886 ZNF445P59923 1031 aa13.69□□□□□ -0.22
HERC1-205ENST00000559886 NAALADL2Q58DX5 795 aa13.69□□□□□ -0.22
HERC1-205ENST00000559886 HAUS3Q68CZ6 603 aa13.69□□□□□ -0.22
HERC1-205ENST00000559886 PDXDC2PQ6P474 469 aa13.69□□□□□ -0.22
HERC1-205ENST00000559886 CEP57L1Q8IYX8 460 aa13.69□□□□□ -0.22
HERC1-205ENST00000559886 ERMNQ8TAM6 284 aa13.69□□□□□ -0.22
HERC1-205ENST00000559886 PNMA5Q96PV4 448 aa13.69□□□□□ -0.22
HERC1-205ENST00000559886 CCT6AP40227 531 aaKnown RBP13.69□□□□□ -0.22
HERC1-205ENST00000559886 MDM2Q00987 491 aaPredicted RBP13.69□□□□□ -0.22
HERC1-205ENST00000559886 ZRSR1Q15695 479 aaKnown RBP13.69□□□□□ -0.22
HERC1-205ENST00000559886 MAMDC4Q6UXC1 1216 aa13.69□□□□□ -0.22
HERC1-205ENST00000559886 SEPT14Q6ZU15 432 aa13.69□□□□□ -0.22
HERC1-205ENST00000559886 CUEDC2Q9H467 287 aa13.69□□□□□ -0.22
HERC1-205ENST00000559886 SLC5A4Q9NY91 659 aa13.69□□□□□ -0.22
HERC1-205ENST00000559886 NFASCO94856 1347 aa13.69□□□□□ -0.22
HERC1-205ENST00000559886 KDM3AQ9Y4C1 1321 aa13.69□□□□□ -0.22
HERC1-205ENST00000559886 TGFB3P10600 412 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 RPA1P27694 616 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 MAP2K5Q13163 448 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 TMEM119Q4V9L6 283 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 ARMCX2Q7L311 632 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 SH3RF1Q7Z6J0 888 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 CKAP2LQ8IYA6 745 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 LRRC15Q8TF66 581 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 USP6NLQ92738 828 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 CCDC34Q96HJ3 373 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 CDK5RAP3Q96JB5 506 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 MAML3Q96JK9 1138 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 PLIN2Q99541 437 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 SENP7Q9BQF6 1050 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 HOOK1Q9UJC3 728 aaKnown RBP13.68□□□□□ -0.22
HERC1-205ENST00000559886 PCNTO95613 3336 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 ZSWIM8A7E2V4 1837 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 DDX39AO00148 427 aaKnown RBP13.68□□□□□ -0.22
HERC1-205ENST00000559886 CHMP2AO43633 222 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 HOXC6P09630 235 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 SPATA31C1P0DKV0 1188 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 ECM1Q16610 540 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 CATSPER3Q86XQ3 398 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 PAGE5Q96GU1 130 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 HSD17B14Q9BPX1 270 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 EIF2AK1Q9BQI3 630 aaKnown RBP13.68□□□□□ -0.22
HERC1-205ENST00000559886 POLR3CQ9BUI4 534 aaPredicted RBP13.68□□□□□ -0.22
HERC1-205ENST00000559886 NT5C3AQ9H0P0 336 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 GJD2Q9UKL4 321 aa13.68□□□□□ -0.22
HERC1-205ENST00000559886 FOXN1O15353 648 aa13.67□□□□□ -0.22
HERC1-205ENST00000559886 MED24O75448 989 aa13.67□□□□□ -0.22
HERC1-205ENST00000559886 TBC1D8O95759 1140 aa13.67□□□□□ -0.22
HERC1-205ENST00000559886 CTGFP29279 349 aa13.67□□□□□ -0.22
HERC1-205ENST00000559886 KRT76Q01546 638 aa13.67□□□□□ -0.22
HERC1-205ENST00000559886 SP2Q02086 613 aa13.67□□□□□ -0.22
HERC1-205ENST00000559886 EPHA7Q15375 998 aa13.67□□□□□ -0.22
HERC1-205ENST00000559886 KCNV1Q6PIU1 500 aa13.67□□□□□ -0.22
HERC1-205ENST00000559886 EEPD1Q7L9B9 569 aa13.67□□□□□ -0.22
HERC1-205ENST00000559886 NPLOC4Q8TAT6 608 aa13.67□□□□□ -0.22
HERC1-205ENST00000559886 RNF186Q9NXI6 227 aa13.67□□□□□ -0.22
HERC1-205ENST00000559886 KIAA1468Q9P260 1216 aa13.67□□□□□ -0.22
HERC1-205ENST00000559886 STK17AQ9UEE5 414 aa13.67□□□□□ -0.22
HERC1-205ENST00000559886 TNPO2O14787 897 aaKnown RBP13.67□□□□□ -0.22
HERC1-205ENST00000559886 ECM2O94769 699 aaPredicted RBP13.67□□□□□ -0.22
HERC1-205ENST00000559886 LACTBP83111 547 aaPredicted RBP13.67□□□□□ -0.22
HERC1-205ENST00000559886 POSTNQ15063 836 aa13.67□□□□□ -0.22
HERC1-205ENST00000559886 ZNF746Q6NUN9 644 aaPredicted RBP13.67□□□□□ -0.22
HERC1-205ENST00000559886 MSL3Q8N5Y2 521 aaKnown RBP13.67□□□□□ -0.22
HERC1-205ENST00000559886 SOCS4Q8WXH5 440 aa13.67□□□□□ -0.22
HERC1-205ENST00000559886 MAGEF1Q9HAY2 307 aa13.67□□□□□ -0.22
HERC1-205ENST00000559886 TUFT1Q9NNX1 390 aa13.67□□□□□ -0.22
HERC1-205ENST00000559886 BLOC1S4Q9NUP1 217 aa13.67□□□□□ -0.22
HERC1-205ENST00000559886 POTEB3A0JP26 581 aa13.66□□□□□ -0.22
HERC1-205ENST00000559886 TRPA1O75762 1119 aa13.66□□□□□ -0.22
HERC1-205ENST00000559886 CCNE2O96020 404 aa13.66□□□□□ -0.22
HERC1-205ENST00000559886 PNOCQ13519 176 aa13.66□□□□□ -0.22
HERC1-205ENST00000559886 POTEBQ6S5H4 581 aa13.66□□□□□ -0.22
HERC1-205ENST00000559886 LRSAM1Q6UWE0 723 aa13.66□□□□□ -0.22
HERC1-205ENST00000559886 MIER3Q7Z3K6 550 aa13.66□□□□□ -0.22
HERC1-205ENST00000559886 LOXHD1Q8IVV2 1947 aa13.66□□□□□ -0.22
HERC1-205ENST00000559886 FBXO16Q8IX29 292 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms