RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 GIMAP8Q8ND71 665 aaPredicted RBP10.59□□□□□ -0.71
HDDC3-204ENST00000559834 IL31RAQ8NI17 732 aa10.59□□□□□ -0.71
HDDC3-204ENST00000559834 EXOC6Q8TAG9 804 aa10.59□□□□□ -0.71
HDDC3-204ENST00000559834 SMARCC2Q8TAQ2 1214 aa10.59□□□□□ -0.71
HDDC3-204ENST00000559834 TOP1MTQ969P6 601 aa10.59□□□□□ -0.71
HDDC3-204ENST00000559834 ZFP91Q96JP5 570 aaPredicted RBP10.59□□□□□ -0.71
HDDC3-204ENST00000559834 INPP4AQ96PE3 977 aaPredicted RBP10.59□□□□□ -0.71
HDDC3-204ENST00000559834 YME1L1Q96TA2 773 aa10.59□□□□□ -0.71
HDDC3-204ENST00000559834 EPHX3Q9H6B9 360 aa10.59□□□□□ -0.71
HDDC3-204ENST00000559834 RTEL1Q9NZ71 1219 aa10.59□□□□□ -0.71
HDDC3-204ENST00000559834 RAPGEFL1Q9UHV5 662 aa10.59□□□□□ -0.71
HDDC3-204ENST00000559834 ZNF215Q9UL58 517 aaPredicted RBP10.59□□□□□ -0.71
HDDC3-204ENST00000559834 ARIH1Q9Y4X5 557 aaPredicted RBP10.59□□□□□ -0.71
HDDC3-204ENST00000559834 TANC1Q9C0D5 1861 aa10.59□□□□□ -0.71
HDDC3-204ENST00000559834 MYH7BA7E2Y1 1941 aa10.58□□□□□ -0.72
HDDC3-204ENST00000559834 MYH6P13533 1939 aa10.58□□□□□ -0.72
HDDC3-204ENST00000559834 TREHO43280 583 aa10.58□□□□□ -0.72
HDDC3-204ENST00000559834 CYTH3O43739 400 aa10.58□□□□□ -0.72
HDDC3-204ENST00000559834 SMARCA1P28370 1054 aa10.58□□□□□ -0.72
HDDC3-204ENST00000559834 HOXC8P31273 242 aa10.58□□□□□ -0.72
HDDC3-204ENST00000559834 PLA2G5P39877 138 aa10.58□□□□□ -0.72
HDDC3-204ENST00000559834 GNAQP50148 359 aa10.58□□□□□ -0.72
HDDC3-204ENST00000559834 MRPS9P82933 396 aaKnown RBP10.58□□□□□ -0.72
HDDC3-204ENST00000559834 PUS10Q3MIT2 529 aaKnown RBP10.58□□□□□ -0.72
HDDC3-204ENST00000559834 LEXMQ3ZCV2 418 aa10.58□□□□□ -0.72
HDDC3-204ENST00000559834 TTC22Q5TAA0 569 aa10.58□□□□□ -0.72
HDDC3-204ENST00000559834 CYFIP1Q7L576 1253 aa10.58□□□□□ -0.72
HDDC3-204ENST00000559834 TMTC2Q8N394 836 aa10.58□□□□□ -0.72
HDDC3-204ENST00000559834 CTCFLQ8NI51 663 aaPredicted RBP10.58□□□□□ -0.72
HDDC3-204ENST00000559834 APBB2Q92870 758 aa10.58□□□□□ -0.72
HDDC3-204ENST00000559834 GPKOWQ92917 476 aaPredicted RBP eCLIP10.58□□□□□ -0.72
HDDC3-204ENST00000559834 MRPL38Q96DV4 380 aaKnown RBP10.58□□□□□ -0.72
HDDC3-204ENST00000559834 RRP36Q96EU6 259 aaKnown RBP10.58□□□□□ -0.72
HDDC3-204ENST00000559834 MAP3K14Q99558 947 aa10.58□□□□□ -0.72
HDDC3-204ENST00000559834 GPR20Q99678 358 aa10.58□□□□□ -0.72
HDDC3-204ENST00000559834 SENP7Q9BQF6 1050 aa10.58□□□□□ -0.72
HDDC3-204ENST00000559834 LZTS2Q9BRK4 669 aa10.58□□□□□ -0.72
HDDC3-204ENST00000559834 UBE2ZQ9H832 354 aaPredicted RBP10.58□□□□□ -0.72
HDDC3-204ENST00000559834 SETD4Q9NVD3 440 aa10.58□□□□□ -0.72
HDDC3-204ENST00000559834 SEC63Q9UGP8 760 aaKnown RBP10.58□□□□□ -0.72
HDDC3-204ENST00000559834 HCN4Q9Y3Q4 1203 aa10.58□□□□□ -0.72
HDDC3-204ENST00000559834 VCANP13611 3396 aa10.58□□□□□ -0.72
HDDC3-204ENST00000559834 E7EWF7 191 aa10.57□□□□□ -0.72
HDDC3-204ENST00000559834 GPR37L1O60883 481 aa10.57□□□□□ -0.72
HDDC3-204ENST00000559834 UPP2O95045 317 aa10.57□□□□□ -0.72
HDDC3-204ENST00000559834 KCNA5P22460 613 aa10.57□□□□□ -0.72
HDDC3-204ENST00000559834 CHMLP26374 656 aa10.57□□□□□ -0.72
HDDC3-204ENST00000559834 PTH1RQ03431 593 aa10.57□□□□□ -0.72
HDDC3-204ENST00000559834 MKRN4PQ13434 485 aaPredicted RBP10.57□□□□□ -0.72
HDDC3-204ENST00000559834 SLC35G1Q2M3R5 365 aa10.57□□□□□ -0.72
HDDC3-204ENST00000559834 EPC2Q52LR7 807 aa10.57□□□□□ -0.72
HDDC3-204ENST00000559834 PCNX4Q63HM2 1172 aa10.57□□□□□ -0.72
HDDC3-204ENST00000559834 RSPH3Q86UC2 560 aa10.57□□□□□ -0.72
HDDC3-204ENST00000559834 SP7Q8TDD2 431 aaPredicted RBP10.57□□□□□ -0.72
HDDC3-204ENST00000559834 IGDCC4Q8TDY8 1250 aa10.57□□□□□ -0.72
HDDC3-204ENST00000559834 PIBF1Q8WXW3 757 aa10.57□□□□□ -0.72
HDDC3-204ENST00000559834 CDHR1Q96JP9 859 aa10.57□□□□□ -0.72
HDDC3-204ENST00000559834 C17orf80Q9BSJ5 609 aa10.57□□□□□ -0.72
HDDC3-204ENST00000559834 MTA3Q9BTC8 594 aa10.57□□□□□ -0.72
HDDC3-204ENST00000559834 LRFN3Q9BTN0 628 aa10.57□□□□□ -0.72
HDDC3-204ENST00000559834 IL25Q9H293 177 aa10.57□□□□□ -0.72
HDDC3-204ENST00000559834 BCAS3Q9H6U6 928 aa10.57□□□□□ -0.72
HDDC3-204ENST00000559834 NRCAMQ92823 1304 aa10.57□□□□□ -0.72
HDDC3-204ENST00000559834 PI4K2BG5E9Z4 385 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 H3BNC9 293 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 PIK3CDO00329 1044 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 NCK2O43639 380 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 CTSHP09668 335 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 ARHGAP4P98171 946 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 GPM6BQ13491 265 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 TIGD5Q53EQ6 642 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 FAM26DQ5JW98 314 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 UTP14CQ5TAP6 766 aaKnown RBP10.56□□□□□ -0.72
HDDC3-204ENST00000559834 TAF2Q6P1X5 1199 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 CASC1Q6TDU7 716 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 RPAINQ86UA6 219 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 TMEM192Q8IY95 271 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 GJD3Q8N144 294 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 BANK1Q8NDB2 785 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 SEPT1Q8WYJ6 367 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 IL17RAQ96F46 866 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 SPZ1Q9BXG8 430 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 IFIH1Q9BYX4 1025 aaKnown RBP10.56□□□□□ -0.72
HDDC3-204ENST00000559834 SENP2Q9HC62 589 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 FAM50BQ9Y247 325 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 LAMA4Q16363 1823 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 FRMPD4Q14CM0 1322 aa10.56□□□□□ -0.72
HDDC3-204ENST00000559834 BAZ2BQ9UIF8 2168 aaKnown RBP10.55□□□□□ -0.72
HDDC3-204ENST00000559834 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.55□□□□□ -0.72
HDDC3-204ENST00000559834 MAFGO15525 162 aa10.55□□□□□ -0.72
HDDC3-204ENST00000559834 SGSM2O43147 1006 aa10.55□□□□□ -0.72
HDDC3-204ENST00000559834 DDAH1O94760 285 aa10.55□□□□□ -0.72
HDDC3-204ENST00000559834 RPLP2P05387 115 aaKnown RBP10.55□□□□□ -0.72
HDDC3-204ENST00000559834 RB1P06400 928 aa10.55□□□□□ -0.72
HDDC3-204ENST00000559834 CALM1P0DP23 149 aa10.55□□□□□ -0.72
HDDC3-204ENST00000559834 CALM2P0DP24 149 aa10.55□□□□□ -0.72
HDDC3-204ENST00000559834 CALM3P0DP25 149 aa10.55□□□□□ -0.72
HDDC3-204ENST00000559834 ALADP13716 330 aa10.55□□□□□ -0.72
HDDC3-204ENST00000559834 GSPT1P15170 499 aaKnown RBP10.55□□□□□ -0.72
HDDC3-204ENST00000559834 SSTR3P32745 418 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms