RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 USO1O60763 962 aaKnown RBP11.11□□□□□ -0.63
LRRC28-216ENST00000559819 NOL4O94818 638 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 NPR1P16066 1061 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 GCFC2P16383 781 aaKnown RBP11.11□□□□□ -0.63
LRRC28-216ENST00000559819 CYP11B2P19099 503 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 MAGEA1P43355 309 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 PSMC6P62333 389 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 RASSF7Q02833 373 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 USH1GQ495M9 461 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 HERC4Q5GLZ8 1057 aaPredicted RBP11.11□□□□□ -0.63
LRRC28-216ENST00000559819 HGSNATQ68CP4 663 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 SIAH1Q8IUQ4 282 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 TSGA10Q9BZW7 698 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 KCNMB3Q9NPA1 279 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 FAM198AQ9UFP1 575 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 TRPC5Q9UL62 973 aaPredicted RBP11.11□□□□□ -0.63
LRRC28-216ENST00000559819 ABCB11O95342 1321 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 ARFGEF1Q9Y6D6 1849 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 MYH4Q9Y623 1939 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 ANO9A1A5B4 782 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 MEIS2O14770 477 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 TACC1O75410 805 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 LMAN1P49257 510 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 HNRNPH2P55795 449 aaKnown RBP11.11□□□□□ -0.63
LRRC28-216ENST00000559819 FKBP3Q00688 224 aaKnown RBP11.11□□□□□ -0.63
LRRC28-216ENST00000559819 ENOX2Q16206 610 aaKnown RBP11.11□□□□□ -0.63
LRRC28-216ENST00000559819 CERKLQ49MI3 558 aaPredicted RBP11.11□□□□□ -0.63
LRRC28-216ENST00000559819 PRR16Q569H4 304 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 TDRD12Q587J7 1177 aaKnown RBP11.11□□□□□ -0.63
LRRC28-216ENST00000559819 ARSHQ5FYA8 562 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 HYIQ5T013 277 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 MSL1Q68DK7 614 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 CCDC84Q86UT8 332 aaPredicted RBP11.11□□□□□ -0.63
LRRC28-216ENST00000559819 COL23A1Q86Y22 540 aaPredicted RBP11.11□□□□□ -0.63
LRRC28-216ENST00000559819 CREG2Q8IUH2 290 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 SCFD1Q8WVM8 642 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 ZNF622Q969S3 477 aaKnown RBP eCLIP11.11□□□□□ -0.63
LRRC28-216ENST00000559819 BCAS3Q9H6U6 928 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 BMP2KQ9NSY1 1161 aaPredicted RBP11.11□□□□□ -0.63
LRRC28-216ENST00000559819 SNX12Q9UMY4 172 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 KDM3AQ9Y4C1 1321 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 GREB1LQ9C091 1923 aaPredicted RBP11.1□□□□□ -0.63
LRRC28-216ENST00000559819 CCDC66A2RUB6 948 aa11.1□□□□□ -0.63
LRRC28-216ENST00000559819 TLR2O60603 784 aa11.1□□□□□ -0.63
LRRC28-216ENST00000559819 EIF3JO75822 258 aaKnown RBP11.1□□□□□ -0.63
LRRC28-216ENST00000559819 LCA5LO95447 670 aa11.1□□□□□ -0.63
LRRC28-216ENST00000559819 KRT18P05783 430 aaKnown RBP11.1□□□□□ -0.63
LRRC28-216ENST00000559819 MATR3P43243 847 aaKnown RBP eCLIP11.1□□□□□ -0.63
LRRC28-216ENST00000559819 CASP5P51878 434 aa11.1□□□□□ -0.63
LRRC28-216ENST00000559819 JAG1P78504 1218 aa11.1□□□□□ -0.63
LRRC28-216ENST00000559819 ASTE1Q2TB18 679 aaPredicted RBP11.1□□□□□ -0.63
LRRC28-216ENST00000559819 CCDC65Q8IXS2 484 aa11.1□□□□□ -0.63
LRRC28-216ENST00000559819 IQCDQ96DY2 449 aa11.1□□□□□ -0.63
LRRC28-216ENST00000559819 POLR2FP61218 127 aaKnown RBP11.1□□□□□ -0.63
LRRC28-216ENST00000559819 ARID5AQ03989 594 aa11.1□□□□□ -0.63
LRRC28-216ENST00000559819 SLC30A10Q6XR72 485 aa11.1□□□□□ -0.63
LRRC28-216ENST00000559819 TRIM58Q8NG06 486 aa11.1□□□□□ -0.63
LRRC28-216ENST00000559819 HDAC7Q8WUI4 952 aa11.1□□□□□ -0.63
LRRC28-216ENST00000559819 NT5C3AQ9H0P0 336 aa11.1□□□□□ -0.63
LRRC28-216ENST00000559819 EHD4Q9H223 541 aa11.1□□□□□ -0.63
LRRC28-216ENST00000559819 KCTD10Q9H3F6 313 aa11.1□□□□□ -0.63
LRRC28-216ENST00000559819 JRKLQ9Y4A0 524 aa11.1□□□□□ -0.63
LRRC28-216ENST00000559819 C10orf71Q711Q0 1435 aa11.1□□□□□ -0.63
LRRC28-216ENST00000559819 SIPA1L1O43166 1804 aa11.1□□□□□ -0.63
LRRC28-216ENST00000559819 NRXN2Q9P2S2 1712 aa11.09□□□□□ -0.63
LRRC28-216ENST00000559819 SLC12A3P55017 1021 aa11.09□□□□□ -0.63
LRRC28-216ENST00000559819 ARHGAP4P98171 946 aa11.09□□□□□ -0.63
LRRC28-216ENST00000559819 ICA1Q05084 483 aa11.09□□□□□ -0.63
LRRC28-216ENST00000559819 IKQ13123 557 aaPredicted RBP11.09□□□□□ -0.63
LRRC28-216ENST00000559819 GPS2Q13227 327 aa11.09□□□□□ -0.63
LRRC28-216ENST00000559819 PABPC4Q13310 644 aaKnown RBP eCLIP11.09□□□□□ -0.63
LRRC28-216ENST00000559819 FAM83BQ5T0W9 1011 aa11.09□□□□□ -0.63
LRRC28-216ENST00000559819 CATSPER3Q86XQ3 398 aa11.09□□□□□ -0.63
LRRC28-216ENST00000559819 DCAF4Q8WV16 495 aa11.09□□□□□ -0.63
LRRC28-216ENST00000559819 CCDC17Q96LX7 622 aa11.09□□□□□ -0.63
LRRC28-216ENST00000559819 ZDHHC15Q96MV8 337 aa11.09□□□□□ -0.63
LRRC28-216ENST00000559819 QTRT2Q9H974 415 aaKnown RBP11.09□□□□□ -0.63
LRRC28-216ENST00000559819 DNA2P51530 1060 aa11.09□□□□□ -0.63
LRRC28-216ENST00000559819 TRIM59Q8IWR1 403 aa11.09□□□□□ -0.63
LRRC28-216ENST00000559819 RIN2Q8WYP3 895 aaPredicted RBP11.09□□□□□ -0.63
LRRC28-216ENST00000559819 OSBPL9Q96SU4 736 aa11.09□□□□□ -0.63
LRRC28-216ENST00000559819 TRIM34Q9BYJ4 488 aa11.09□□□□□ -0.63
LRRC28-216ENST00000559819 DHX36Q9H2U1 1008 aaKnown RBP11.09□□□□□ -0.63
LRRC28-216ENST00000559819 EMILIN3Q9NT22 766 aa11.09□□□□□ -0.63
LRRC28-216ENST00000559819 FAM86B1E9PN63 330 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 F5H6K3 240 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 MMP10P09238 476 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 FAM86B2P0C5J1 330 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 HOXA13P31271 388 aaPredicted RBP11.08□□□□□ -0.64
LRRC28-216ENST00000559819 NAP1L1P55209 391 aaKnown RBP11.08□□□□□ -0.64
LRRC28-216ENST00000559819 KLRC3Q07444 240 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 SPIRE1Q08AE8 756 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 RAPGEF1Q13905 1077 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 SFMBT2Q5VUG0 894 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 TXLNBQ8N3L3 684 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 CYP2W1Q8TAV3 490 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 ETNPPLQ8TBG4 499 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 MKL1Q969V6 931 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 EXOC4Q96A65 974 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 RPGRIP1Q96KN7 1286 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms