RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 CTC1Q2NKJ3 1217 aa12.58□□□□□ -0.4
TRAF3-207ENST00000559734 QRICH1Q2TAL8 776 aa12.58□□□□□ -0.4
TRAF3-207ENST00000559734 CELF3Q5SZQ8 465 aaKnown RBP12.58□□□□□ -0.4
TRAF3-207ENST00000559734 C20orf194Q5TEA3 1177 aa12.58□□□□□ -0.4
TRAF3-207ENST00000559734 MYSM1Q5VVJ2 828 aa12.58□□□□□ -0.4
TRAF3-207ENST00000559734 TRIM67Q6ZTA4 783 aa12.58□□□□□ -0.4
TRAF3-207ENST00000559734 ADGRF4Q8IZF3 695 aa12.58□□□□□ -0.4
TRAF3-207ENST00000559734 ZFP91Q96JP5 570 aaPredicted RBP12.58□□□□□ -0.4
TRAF3-207ENST00000559734 MLXIPQ9HAP2 919 aa12.58□□□□□ -0.4
TRAF3-207ENST00000559734 ADGRA3Q8IWK6 1321 aa12.58□□□□□ -0.4
TRAF3-207ENST00000559734 ZNF318Q5VUA4 2279 aa12.58□□□□□ -0.4
TRAF3-207ENST00000559734 NLRC5Q86WI3 1866 aa12.57□□□□□ -0.4
TRAF3-207ENST00000559734 H3BRB1 525 aa12.57□□□□□ -0.4
TRAF3-207ENST00000559734 RB1P06400 928 aa12.57□□□□□ -0.4
TRAF3-207ENST00000559734 HOXD8P13378 290 aaPredicted RBP12.57□□□□□ -0.4
TRAF3-207ENST00000559734 UBA1P22314 1058 aaKnown RBP12.57□□□□□ -0.4
TRAF3-207ENST00000559734 BMPR1AP36894 532 aa12.57□□□□□ -0.4
TRAF3-207ENST00000559734 TCF15Q12870 199 aa12.57□□□□□ -0.4
TRAF3-207ENST00000559734 ALX1Q15699 326 aa12.57□□□□□ -0.4
TRAF3-207ENST00000559734 MFSD6Q6ZSS7 791 aa12.57□□□□□ -0.4
TRAF3-207ENST00000559734 APBB2Q92870 758 aa12.57□□□□□ -0.4
TRAF3-207ENST00000559734 TTC14Q96N46 770 aa12.57□□□□□ -0.4
TRAF3-207ENST00000559734 PRRX2Q99811 253 aa12.57□□□□□ -0.4
TRAF3-207ENST00000559734 C16orf70Q9BSU1 422 aa12.57□□□□□ -0.4
TRAF3-207ENST00000559734 TUT1Q9H6E5 874 aaKnown RBP12.57□□□□□ -0.4
TRAF3-207ENST00000559734 ALG13Q9NP73 1137 aaKnown RBP12.57□□□□□ -0.4
TRAF3-207ENST00000559734 RWDD3Q9Y3V2 267 aa12.57□□□□□ -0.4
TRAF3-207ENST00000559734 COL4A6Q14031 1691 aa12.57□□□□□ -0.4
TRAF3-207ENST00000559734 KIAA1217Q5T5P2 1943 aa12.56□□□□□ -0.4
TRAF3-207ENST00000559734 C5orf67F2Z3F1 127 aa12.56□□□□□ -0.4
TRAF3-207ENST00000559734 NOP56O00567 594 aaKnown RBP12.56□□□□□ -0.4
TRAF3-207ENST00000559734 LGALS2P05162 132 aa12.56□□□□□ -0.4
TRAF3-207ENST00000559734 MX1P20591 662 aa12.56□□□□□ -0.4
TRAF3-207ENST00000559734 ZXDAP98168 799 aa12.56□□□□□ -0.4
TRAF3-207ENST00000559734 BTG3Q14201 252 aaPredicted RBP12.56□□□□□ -0.4
TRAF3-207ENST00000559734 BMP8AQ7Z5Y6 402 aa12.56□□□□□ -0.4
TRAF3-207ENST00000559734 TBC1D10CQ8IV04 446 aa12.56□□□□□ -0.4
TRAF3-207ENST00000559734 FBXL6Q8N531 539 aa12.56□□□□□ -0.4
TRAF3-207ENST00000559734 PNMA1Q8ND90 353 aa12.56□□□□□ -0.4
TRAF3-207ENST00000559734 ATOH1Q92858 354 aaPredicted RBP12.56□□□□□ -0.4
TRAF3-207ENST00000559734 FAM227BQ96M60 508 aa12.56□□□□□ -0.4
TRAF3-207ENST00000559734 PDCD2LQ9BRP1 358 aa12.56□□□□□ -0.4
TRAF3-207ENST00000559734 RNPEPQ9H4A4 650 aa12.56□□□□□ -0.4
TRAF3-207ENST00000559734 KAT14Q9H8E8 782 aa12.56□□□□□ -0.4
TRAF3-207ENST00000559734 SETD4Q9NVD3 440 aa12.56□□□□□ -0.4
TRAF3-207ENST00000559734 RALGAPA2Q2PPJ7 1873 aa12.56□□□□□ -0.4
TRAF3-207ENST00000559734 NEDD4P46934 1319 aa12.56□□□□□ -0.4
TRAF3-207ENST00000559734 A0A0D9SFI3 127 aa12.55□□□□□ -0.4
TRAF3-207ENST00000559734 TRIM6-TRIM34B2RNG4 842 aa12.55□□□□□ -0.4
TRAF3-207ENST00000559734 CAND2O75155 1236 aa12.55□□□□□ -0.4
TRAF3-207ENST00000559734 MMP1P03956 469 aa12.55□□□□□ -0.4
TRAF3-207ENST00000559734 GHRP10912 638 aa12.55□□□□□ -0.4
TRAF3-207ENST00000559734 HOXA13P31271 388 aaPredicted RBP12.55□□□□□ -0.4
TRAF3-207ENST00000559734 VCPP55072 806 aaKnown RBP12.55□□□□□ -0.4
TRAF3-207ENST00000559734 ARHGAP4P98171 946 aa12.55□□□□□ -0.4
TRAF3-207ENST00000559734 SP2Q02086 613 aa12.55□□□□□ -0.4
TRAF3-207ENST00000559734 PKN1Q16512 942 aa12.55□□□□□ -0.4
TRAF3-207ENST00000559734 ASPRV1Q53RT3 343 aa12.55□□□□□ -0.4
TRAF3-207ENST00000559734 KCNV1Q6PIU1 500 aa12.55□□□□□ -0.4
TRAF3-207ENST00000559734 IL31RAQ8NI17 732 aa12.55□□□□□ -0.4
TRAF3-207ENST00000559734 ESR2Q92731 530 aa12.55□□□□□ -0.4
TRAF3-207ENST00000559734 GPKOWQ92917 476 aaPredicted RBP eCLIP12.55□□□□□ -0.4
TRAF3-207ENST00000559734 PPP2R3CQ969Q6 453 aa12.55□□□□□ -0.4
TRAF3-207ENST00000559734 MAF1Q9H063 256 aa12.55□□□□□ -0.4
TRAF3-207ENST00000559734 HELLSQ9NRZ9 838 aa12.55□□□□□ -0.4
TRAF3-207ENST00000559734 RGS20O76081 388 aa12.54□□□□□ -0.4
TRAF3-207ENST00000559734 PARP1P09874 1014 aaKnown RBP12.54□□□□□ -0.4
TRAF3-207ENST00000559734 LINC00271P0C7V0 271 aa12.54□□□□□ -0.4
TRAF3-207ENST00000559734 GNAT1P11488 350 aa12.54□□□□□ -0.4
TRAF3-207ENST00000559734 RRP1P56182 461 aaKnown RBP12.54□□□□□ -0.4
TRAF3-207ENST00000559734 ADAM15Q13444 863 aa12.54□□□□□ -0.4
TRAF3-207ENST00000559734 PGM5Q15124 567 aa12.54□□□□□ -0.4
TRAF3-207ENST00000559734 MCMDC2Q4G0Z9 681 aa12.54□□□□□ -0.4
TRAF3-207ENST00000559734 UTP14CQ5TAP6 766 aaKnown RBP12.54□□□□□ -0.4
TRAF3-207ENST00000559734 ADGRD2Q7Z7M1 963 aa12.54□□□□□ -0.4
TRAF3-207ENST00000559734 RBM23Q86U06 439 aaKnown RBP12.54□□□□□ -0.4
TRAF3-207ENST00000559734 ZNF589Q86UQ0 364 aaPredicted RBP12.54□□□□□ -0.4
TRAF3-207ENST00000559734 TRIM50Q86XT4 487 aa12.54□□□□□ -0.4
TRAF3-207ENST00000559734 EVI5LQ96CN4 794 aa12.54□□□□□ -0.4
TRAF3-207ENST00000559734 RPGRIP1Q96KN7 1286 aa12.54□□□□□ -0.4
TRAF3-207ENST00000559734 RNF41Q9H4P4 317 aaPredicted RBP12.54□□□□□ -0.4
TRAF3-207ENST00000559734 JMJD4Q9H9V9 463 aa12.54□□□□□ -0.4
TRAF3-207ENST00000559734 RCAN3Q9UKA8 241 aa12.54□□□□□ -0.4
TRAF3-207ENST00000559734 BARX2Q9UMQ3 279 aaPredicted RBP12.54□□□□□ -0.4
TRAF3-207ENST00000559734 SUPT16HQ9Y5B9 1047 aaKnown RBP12.54□□□□□ -0.4
TRAF3-207ENST00000559734 TECTAO75443 2155 aa12.54□□□□□ -0.4
TRAF3-207ENST00000559734 ATG2AQ2TAZ0 1938 aa12.54□□□□□ -0.4
TRAF3-207ENST00000559734 MYH7BA7E2Y1 1941 aa12.53□□□□□ -0.4
TRAF3-207ENST00000559734 IBSPP21815 317 aaPredicted RBP12.53□□□□□ -0.4
TRAF3-207ENST00000559734 CCND2P30279 289 aa12.53□□□□□ -0.4
TRAF3-207ENST00000559734 HOXC8P31273 242 aa12.53□□□□□ -0.4
TRAF3-207ENST00000559734 NRIP1P48552 1158 aa12.53□□□□□ -0.4
TRAF3-207ENST00000559734 HSD17B4P51659 736 aa12.53□□□□□ -0.4
TRAF3-207ENST00000559734 SP4Q02446 784 aa12.53□□□□□ -0.4
TRAF3-207ENST00000559734 FCHSD1Q86WN1 690 aa12.53□□□□□ -0.4
TRAF3-207ENST00000559734 IQCA1Q86XH1 822 aa12.53□□□□□ -0.4
TRAF3-207ENST00000559734 DGKHQ86XP1 1220 aa12.53□□□□□ -0.4
TRAF3-207ENST00000559734 MSLNLQ96KJ4 702 aa12.53□□□□□ -0.4
TRAF3-207ENST00000559734 AMNQ9BXJ7 453 aa12.53□□□□□ -0.4
TRAF3-207ENST00000559734 BCAS3Q9H6U6 928 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms