RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 SZT2Q5T011 3432 aa7.75□□□□□ -1.17
CRNDE-207ENST00000559598 CUL9Q8IWT3 2517 aa7.74□□□□□ -1.17
CRNDE-207ENST00000559598 IGF2BP3O00425 579 aaKnown RBP eCLIP7.74□□□□□ -1.17
CRNDE-207ENST00000559598 ECE2O60344 883 aa7.74□□□□□ -1.17
CRNDE-207ENST00000559598 ADAMTS4O75173 837 aa7.74□□□□□ -1.17
CRNDE-207ENST00000559598 TBC1D8O95759 1140 aa7.74□□□□□ -1.17
CRNDE-207ENST00000559598 CEACAM5P06731 702 aa7.74□□□□□ -1.17
CRNDE-207ENST00000559598 MYL6BP14649 208 aa7.74□□□□□ -1.17
CRNDE-207ENST00000559598 RACK1P63244 317 aaKnown RBP7.74□□□□□ -1.17
CRNDE-207ENST00000559598 APOBRQ0VD83 1088 aa7.74□□□□□ -1.17
CRNDE-207ENST00000559598 CC2D1BQ5T0F9 858 aaKnown RBP7.74□□□□□ -1.17
CRNDE-207ENST00000559598 FAM13CQ8NE31 585 aa7.74□□□□□ -1.17
CRNDE-207ENST00000559598 AGBL3Q8NEM8 1001 aa7.74□□□□□ -1.17
CRNDE-207ENST00000559598 EAF1Q96JC9 268 aaPredicted RBP7.74□□□□□ -1.17
CRNDE-207ENST00000559598 DBNDD1Q9H9R9 158 aa7.74□□□□□ -1.17
CRNDE-207ENST00000559598 BRMS1Q9HCU9 246 aa7.74□□□□□ -1.17
CRNDE-207ENST00000559598 CCDC39Q9UFE4 941 aa7.74□□□□□ -1.17
CRNDE-207ENST00000559598 TPX2Q9ULW0 747 aaKnown RBP7.74□□□□□ -1.17
CRNDE-207ENST00000559598 MAPK8IP1Q9UQF2 711 aa7.74□□□□□ -1.17
CRNDE-207ENST00000559598 RRP7AQ9Y3A4 280 aaKnown RBP7.74□□□□□ -1.17
CRNDE-207ENST00000559598 PCDHB14Q9Y5E9 798 aa7.74□□□□□ -1.17
CRNDE-207ENST00000559598 SH3TC1Q8TE82 1336 aa7.74□□□□□ -1.17
CRNDE-207ENST00000559598 RTL9Q8NET4 1388 aa7.73□□□□□ -1.17
CRNDE-207ENST00000559598 UPK3BL1B0FP48 263 aa7.73□□□□□ -1.17
CRNDE-207ENST00000559598 UPK3BL2E5RIL1 263 aa7.73□□□□□ -1.17
CRNDE-207ENST00000559598 VIL1P09327 827 aaKnown RBP7.73□□□□□ -1.17
CRNDE-207ENST00000559598 NF2P35240 595 aa7.73□□□□□ -1.17
CRNDE-207ENST00000559598 YARSP54577 528 aaKnown RBP7.73□□□□□ -1.17
CRNDE-207ENST00000559598 ZNF280AP59817 542 aaPredicted RBP7.73□□□□□ -1.17
CRNDE-207ENST00000559598 HDLBPQ00341 1268 aaKnown RBP7.73□□□□□ -1.17
CRNDE-207ENST00000559598 IFI16Q16666 785 aaKnown RBP7.73□□□□□ -1.17
CRNDE-207ENST00000559598 ZNF746Q6NUN9 644 aaPredicted RBP7.73□□□□□ -1.17
CRNDE-207ENST00000559598 DLK2Q6UY11 383 aa7.73□□□□□ -1.17
CRNDE-207ENST00000559598 KRTAP19-1Q8IUB9 90 aa7.73□□□□□ -1.17
CRNDE-207ENST00000559598 ZNF428Q96B54 188 aa7.73□□□□□ -1.17
CRNDE-207ENST00000559598 ANP32EQ9BTT0 268 aa7.73□□□□□ -1.17
CRNDE-207ENST00000559598 ANGEL1Q9UNK9 670 aaKnown RBP7.73□□□□□ -1.17
CRNDE-207ENST00000559598 ATE1O95260 518 aa7.72□□□□□ -1.17
CRNDE-207ENST00000559598 ITIH2P19823 946 aa7.72□□□□□ -1.17
CRNDE-207ENST00000559598 EIF4A1P60842 406 aaKnown RBP7.72□□□□□ -1.17
CRNDE-207ENST00000559598 TCIRG1Q13488 830 aa7.72□□□□□ -1.17
CRNDE-207ENST00000559598 SEZ6Q53EL9 994 aa7.72□□□□□ -1.17
CRNDE-207ENST00000559598 ANGEL2Q5VTE6 544 aaKnown RBP7.72□□□□□ -1.17
CRNDE-207ENST00000559598 VSIG10LQ86VR7 867 aa7.72□□□□□ -1.17
CRNDE-207ENST00000559598 NKD1Q969G9 470 aa7.72□□□□□ -1.17
CRNDE-207ENST00000559598 KLHL3Q9UH77 587 aa7.72□□□□□ -1.17
CRNDE-207ENST00000559598 PLAGL2Q9UPG8 496 aa7.72□□□□□ -1.17
CRNDE-207ENST00000559598 RNF114Q9Y508 228 aa7.72□□□□□ -1.17
CRNDE-207ENST00000559598 ECM29Q5VYK3 1845 aa7.72□□□□□ -1.17
CRNDE-207ENST00000559598 COL1A1P02452 1464 aaPredicted RBP7.71□□□□□ -1.18
CRNDE-207ENST00000559598 CHURC1-FNTBB4DL54 471 aa7.71□□□□□ -1.18
CRNDE-207ENST00000559598 DNAJA2O60884 412 aa7.71□□□□□ -1.18
CRNDE-207ENST00000559598 U2AF1L5P0DN76 240 aaPredicted RBP7.71□□□□□ -1.18
CRNDE-207ENST00000559598 MMP14P50281 582 aa7.71□□□□□ -1.18
CRNDE-207ENST00000559598 INHBEP58166 350 aa7.71□□□□□ -1.18
CRNDE-207ENST00000559598 U2AF1Q01081 240 aaKnown RBP eCLIP7.71□□□□□ -1.18
CRNDE-207ENST00000559598 DCTN1Q14203 1278 aa7.71□□□□□ -1.18
CRNDE-207ENST00000559598 SFRP5Q5T4F7 317 aa7.71□□□□□ -1.18
CRNDE-207ENST00000559598 CDH24Q86UP0 819 aa7.71□□□□□ -1.18
CRNDE-207ENST00000559598 NLRP10Q86W26 655 aa7.71□□□□□ -1.18
CRNDE-207ENST00000559598 NT5DC4Q86YG4 428 aa7.71□□□□□ -1.18
CRNDE-207ENST00000559598 SLITRK4Q8IW52 837 aa7.71□□□□□ -1.18
CRNDE-207ENST00000559598 SLFN12Q8IYM2 578 aa7.71□□□□□ -1.18
CRNDE-207ENST00000559598 ZNF654Q8IZM8 581 aa7.71□□□□□ -1.18
CRNDE-207ENST00000559598 REXO1Q8N1G1 1221 aaKnown RBP7.71□□□□□ -1.18
CRNDE-207ENST00000559598 CYB5D2Q8WUJ1 264 aa7.71□□□□□ -1.18
CRNDE-207ENST00000559598 ARMC5Q96C12 935 aa7.71□□□□□ -1.18
CRNDE-207ENST00000559598 ERO1AQ96HE7 468 aa7.71□□□□□ -1.18
CRNDE-207ENST00000559598 EHMT1Q9H9B1 1298 aa7.71□□□□□ -1.18
CRNDE-207ENST00000559598 TRMT112Q9UI30 125 aaKnown RBP7.71□□□□□ -1.18
CRNDE-207ENST00000559598 TRIM17Q9Y577 477 aa7.71□□□□□ -1.18
CRNDE-207ENST00000559598 MANSC4A6NHS7 340 aaPredicted RBP7.7□□□□□ -1.18
CRNDE-207ENST00000559598 HSP90B1P14625 803 aaKnown RBP7.7□□□□□ -1.18
CRNDE-207ENST00000559598 CYP7A1P22680 504 aa7.7□□□□□ -1.18
CRNDE-207ENST00000559598 MCM4P33991 863 aa7.7□□□□□ -1.18
CRNDE-207ENST00000559598 ZNF165P49910 485 aa7.7□□□□□ -1.18
CRNDE-207ENST00000559598 SF3B3Q15393 1217 aaKnown RBP7.7□□□□□ -1.18
CRNDE-207ENST00000559598 C22orf34Q6ZV56 151 aa7.7□□□□□ -1.18
CRNDE-207ENST00000559598 OTOP1Q7RTM1 612 aa7.7□□□□□ -1.18
CRNDE-207ENST00000559598 ARMC9Q7Z3E5 817 aa7.7□□□□□ -1.18
CRNDE-207ENST00000559598 LRP10Q7Z4F1 713 aa7.7□□□□□ -1.18
CRNDE-207ENST00000559598 BCL7CQ8WUZ0 217 aaPredicted RBP7.7□□□□□ -1.18
CRNDE-207ENST00000559598 MISP3Q96FF7 219 aa7.7□□□□□ -1.18
CRNDE-207ENST00000559598 COX4I2Q96KJ9 171 aa7.7□□□□□ -1.18
CRNDE-207ENST00000559598 TNKS2Q9H2K2 1166 aa7.7□□□□□ -1.18
CRNDE-207ENST00000559598 MYOZ2Q9NPC6 264 aa7.7□□□□□ -1.18
CRNDE-207ENST00000559598 POLLQ9UGP5 575 aa7.7□□□□□ -1.18
CRNDE-207ENST00000559598 CEP131Q9UPN4 1083 aa7.7□□□□□ -1.18
CRNDE-207ENST00000559598 ZNF646O15015 1829 aaPredicted RBP7.7□□□□□ -1.18
CRNDE-207ENST00000559598 TMEM265A0A087WTH1 108 aa7.69□□□□□ -1.18
CRNDE-207ENST00000559598 ZNF865P0CJ78 1059 aaPredicted RBP7.69□□□□□ -1.18
CRNDE-207ENST00000559598 ZBTB48P10074 688 aaPredicted RBP7.69□□□□□ -1.18
CRNDE-207ENST00000559598 CLCQ05315 142 aa7.69□□□□□ -1.18
CRNDE-207ENST00000559598 NFXL1Q6ZNB6 911 aa7.69□□□□□ -1.18
CRNDE-207ENST00000559598 GK5Q6ZS86 529 aa7.69□□□□□ -1.18
CRNDE-207ENST00000559598 SPACA3Q8IXA5 215 aa7.69□□□□□ -1.18
CRNDE-207ENST00000559598 STK11IPQ8N1F8 1099 aa7.69□□□□□ -1.18
CRNDE-207ENST00000559598 DNAJB8Q8NHS0 232 aa7.69□□□□□ -1.18
CRNDE-207ENST00000559598 TBC1D16Q8TBP0 767 aa7.69□□□□□ -1.18
CRNDE-207ENST00000559598 PPP1R13LQ8WUF5 828 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms