RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 BFSP2Q13515 415 aa19.3■□□□□ 0.68
PSEN1-224ENST00000559361 BECN1Q14457 450 aa19.3■□□□□ 0.68
PSEN1-224ENST00000559361 NTRK3Q16288 839 aa19.3■□□□□ 0.68
PSEN1-224ENST00000559361 FAM47CQ5HY64 1035 aa19.3■□□□□ 0.68
PSEN1-224ENST00000559361 SRBD1Q8N5C6 995 aaKnown RBP19.3■□□□□ 0.68
PSEN1-224ENST00000559361 CTAGE1Q96RT6 745 aa19.3■□□□□ 0.68
PSEN1-224ENST00000559361 FTOQ9C0B1 505 aaKnown RBP eCLIP19.3■□□□□ 0.68
PSEN1-224ENST00000559361 UBA5Q9GZZ9 404 aa19.3■□□□□ 0.68
PSEN1-224ENST00000559361 JMJD4Q9H9V9 463 aa19.3■□□□□ 0.68
PSEN1-224ENST00000559361 NCOA5Q9HCD5 579 aaKnown RBP19.3■□□□□ 0.68
PSEN1-224ENST00000559361 CNTNAP5Q8WYK1 1306 aa19.29■□□□□ 0.68
PSEN1-224ENST00000559361 STK36Q9NRP7 1315 aa19.29■□□□□ 0.68
PSEN1-224ENST00000559361 hCG_1984214I3L0E3 225 aa19.29■□□□□ 0.68
PSEN1-224ENST00000559361 ZBTB5O15062 677 aa19.29■□□□□ 0.68
PSEN1-224ENST00000559361 LARGE1O95461 756 aa19.29■□□□□ 0.68
PSEN1-224ENST00000559361 HMGN5P82970 282 aaKnown RBP19.29■□□□□ 0.68
PSEN1-224ENST00000559361 BRDTQ58F21 947 aaPredicted RBP19.29■□□□□ 0.68
PSEN1-224ENST00000559361 ZNF713Q8N859 430 aaPredicted RBP19.29■□□□□ 0.68
PSEN1-224ENST00000559361 PPP1R13LQ8WUF5 828 aa19.29■□□□□ 0.68
PSEN1-224ENST00000559361 CLEC4DQ8WXI8 215 aa19.29■□□□□ 0.68
PSEN1-224ENST00000559361 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.29■□□□□ 0.68
PSEN1-224ENST00000559361 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.28■□□□□ 0.68
PSEN1-224ENST00000559361 PNMA6FA0A0J9YX94 578 aa19.28■□□□□ 0.68
PSEN1-224ENST00000559361 LCHNA4D1U4 455 aa19.28■□□□□ 0.68
PSEN1-224ENST00000559361 CYTH3O43739 400 aa19.28■□□□□ 0.68
PSEN1-224ENST00000559361 ANP32AP39687 249 aaKnown RBP19.28■□□□□ 0.68
PSEN1-224ENST00000559361 CUL4AQ13619 759 aa19.28■□□□□ 0.68
PSEN1-224ENST00000559361 CDC37Q16543 378 aaPredicted RBP19.28■□□□□ 0.68
PSEN1-224ENST00000559361 TEX2Q8IWB9 1127 aa19.28■□□□□ 0.68
PSEN1-224ENST00000559361 FAM177A1Q8N128 213 aaPredicted RBP19.28■□□□□ 0.68
PSEN1-224ENST00000559361 SCFD2Q8WU76 684 aa19.28■□□□□ 0.68
PSEN1-224ENST00000559361 KIF3AQ9Y496 699 aa19.28■□□□□ 0.68
PSEN1-224ENST00000559361 PRPF3O43395 683 aaKnown RBP19.27■□□□□ 0.68
PSEN1-224ENST00000559361 DEXIO95424 95 aa19.27■□□□□ 0.68
PSEN1-224ENST00000559361 WDR5P61964 334 aaKnown RBP19.27■□□□□ 0.68
PSEN1-224ENST00000559361 SSRP1Q08945 709 aaKnown RBP19.27■□□□□ 0.68
PSEN1-224ENST00000559361 RBL2Q08999 1139 aa19.27■□□□□ 0.68
PSEN1-224ENST00000559361 SLC30A10Q6XR72 485 aa19.27■□□□□ 0.68
PSEN1-224ENST00000559361 SESTD1Q86VW0 696 aa19.27■□□□□ 0.68
PSEN1-224ENST00000559361 CCDC83Q8IWF9 413 aa19.27■□□□□ 0.68
PSEN1-224ENST00000559361 NECAB1Q8N987 351 aa19.27■□□□□ 0.68
PSEN1-224ENST00000559361 DNERQ8NFT8 737 aa19.27■□□□□ 0.68
PSEN1-224ENST00000559361 CAGE1Q8TC20 777 aa19.27■□□□□ 0.68
PSEN1-224ENST00000559361 AFAP1L1Q8TED9 768 aa19.27■□□□□ 0.68
PSEN1-224ENST00000559361 WASF1Q92558 559 aa19.27■□□□□ 0.68
PSEN1-224ENST00000559361 COPS5Q92905 334 aa19.27■□□□□ 0.68
PSEN1-224ENST00000559361 INTS4Q96HW7 963 aaKnown RBP19.27■□□□□ 0.68
PSEN1-224ENST00000559361 MAF1Q9H063 256 aa19.27■□□□□ 0.68
PSEN1-224ENST00000559361 PTPDC1A2A3K4 754 aa19.26■□□□□ 0.67
PSEN1-224ENST00000559361 CXCL10P02778 98 aa19.26■□□□□ 0.67
PSEN1-224ENST00000559361 KCNJ6P48051 423 aa19.26■□□□□ 0.67
PSEN1-224ENST00000559361 AMNQ9BXJ7 453 aa19.26■□□□□ 0.67
PSEN1-224ENST00000559361 SUGCTQ9HAC7 445 aa19.26■□□□□ 0.67
PSEN1-224ENST00000559361 SIP14410 1827 aa19.25■□□□□ 0.67
PSEN1-224ENST00000559361 MYO7AQ13402 2215 aa19.25■□□□□ 0.67
PSEN1-224ENST00000559361 FAM86C2PA6NEL3 165 aa19.25■□□□□ 0.67
PSEN1-224ENST00000559361 ERVK-21P61565 698 aa19.25■□□□□ 0.67
PSEN1-224ENST00000559361 RPS6P62753 249 aaKnown RBP19.25■□□□□ 0.67
PSEN1-224ENST00000559361 PDE4DQ08499 809 aa19.25■□□□□ 0.67
PSEN1-224ENST00000559361 PTGISQ16647 500 aa19.25■□□□□ 0.67
PSEN1-224ENST00000559361 SLC35G1Q2M3R5 365 aa19.25■□□□□ 0.67
PSEN1-224ENST00000559361 QRICH1Q2TAL8 776 aa19.25■□□□□ 0.67
PSEN1-224ENST00000559361 PPP1R18Q6NYC8 613 aa19.25■□□□□ 0.67
PSEN1-224ENST00000559361 CCDC62Q6P9F0 684 aa19.25■□□□□ 0.67
PSEN1-224ENST00000559361 RNF207Q6ZRF8 634 aa19.25■□□□□ 0.67
PSEN1-224ENST00000559361 FBXO11Q86XK2 927 aa19.25■□□□□ 0.67
PSEN1-224ENST00000559361 HOMER1Q86YM7 354 aa19.25■□□□□ 0.67
PSEN1-224ENST00000559361 CMTR1Q8N1G2 835 aaKnown RBP19.25■□□□□ 0.67
PSEN1-224ENST00000559361 CCDC82Q8N4S0 544 aa19.25■□□□□ 0.67
PSEN1-224ENST00000559361 NSUN7Q8NE18 718 aaKnown RBP19.25■□□□□ 0.67
PSEN1-224ENST00000559361 GDPD5Q8WTR4 605 aa19.25■□□□□ 0.67
PSEN1-224ENST00000559361 PIGSQ96S52 555 aa19.25■□□□□ 0.67
PSEN1-224ENST00000559361 SLC26A6Q9BXS9 759 aa19.25■□□□□ 0.67
PSEN1-224ENST00000559361 CPVLQ9H3G5 476 aa19.25■□□□□ 0.67
PSEN1-224ENST00000559361 VAT1LQ9HCJ6 419 aa19.25■□□□□ 0.67
PSEN1-224ENST00000559361 V9GY48 417 aaPredicted RBP19.25■□□□□ 0.67
PSEN1-224ENST00000559361 ARIH2O95376 493 aa19.24■□□□□ 0.67
PSEN1-224ENST00000559361 GJB5O95377 273 aa19.24■□□□□ 0.67
PSEN1-224ENST00000559361 PARNO95453 639 aaKnown RBP19.24■□□□□ 0.67
PSEN1-224ENST00000559361 TXNP10599 105 aaKnown RBP19.24■□□□□ 0.67
PSEN1-224ENST00000559361 CALML3P27482 149 aa19.24■□□□□ 0.67
PSEN1-224ENST00000559361 DEFB103AP81534 67 aa19.24■□□□□ 0.67
PSEN1-224ENST00000559361 ST3GAL1Q11201 340 aa19.24■□□□□ 0.67
PSEN1-224ENST00000559361 PFKFB3Q16875 520 aaPredicted RBP19.24■□□□□ 0.67
PSEN1-224ENST00000559361 GDF6Q6KF10 455 aaPredicted RBP19.24■□□□□ 0.67
PSEN1-224ENST00000559361 CNKSR3Q6P9H4 555 aa19.24■□□□□ 0.67
PSEN1-224ENST00000559361 TMCO2Q7Z6W1 182 aaPredicted RBP19.24■□□□□ 0.67
PSEN1-224ENST00000559361 FAM178BQ8IXR5 827 aa19.24■□□□□ 0.67
PSEN1-224ENST00000559361 CCDC155Q8N6L0 562 aa19.24■□□□□ 0.67
PSEN1-224ENST00000559361 SMARCC2Q8TAQ2 1214 aa19.24■□□□□ 0.67
PSEN1-224ENST00000559361 CCDC12Q8WUD4 166 aaPredicted RBP19.24■□□□□ 0.67
PSEN1-224ENST00000559361 DHX38Q92620 1227 aaKnown RBP19.24■□□□□ 0.67
PSEN1-224ENST00000559361 RAD9AQ99638 391 aa19.24■□□□□ 0.67
PSEN1-224ENST00000559361 UBE2ZQ9H832 354 aaPredicted RBP19.24■□□□□ 0.67
PSEN1-224ENST00000559361 NOD1Q9Y239 953 aa19.24■□□□□ 0.67
PSEN1-224ENST00000559361 ABCB11O95342 1321 aa19.24■□□□□ 0.67
PSEN1-224ENST00000559361 KIAA1217Q5T5P2 1943 aa19.23■□□□□ 0.67
PSEN1-224ENST00000559361 PRR33A8MZF0 331 aa19.23■□□□□ 0.67
PSEN1-224ENST00000559361 CTDNEP1O95476 244 aa19.23■□□□□ 0.67
PSEN1-224ENST00000559361 SCG2P13521 617 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms