RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 PHOX2BQ99453 314 aa13.02□□□□□ -0.33
CHRNA3-205ENST00000559080 KATNAL1Q9BW62 490 aa13.02□□□□□ -0.33
CHRNA3-205ENST00000559080 OSBPL7Q9BZF2 842 aa13.02□□□□□ -0.33
CHRNA3-205ENST00000559080 CPVLQ9H3G5 476 aa13.02□□□□□ -0.33
CHRNA3-205ENST00000559080 RBM8AQ9Y5S9 174 aaKnown RBP13.02□□□□□ -0.33
CHRNA3-205ENST00000559080 BAZ2BQ9UIF8 2168 aaKnown RBP13.02□□□□□ -0.33
CHRNA3-205ENST00000559080 ABCB11O95342 1321 aa13.02□□□□□ -0.33
CHRNA3-205ENST00000559080 E7EWF7 191 aa13.01□□□□□ -0.33
CHRNA3-205ENST00000559080 IFIT3O14879 490 aaKnown RBP13.01□□□□□ -0.33
CHRNA3-205ENST00000559080 AMHP03971 560 aa13.01□□□□□ -0.33
CHRNA3-205ENST00000559080 GPM6BQ13491 265 aa13.01□□□□□ -0.33
CHRNA3-205ENST00000559080 WTAPQ15007 396 aa13.01□□□□□ -0.33
CHRNA3-205ENST00000559080 SEC23AQ15436 765 aa13.01□□□□□ -0.33
CHRNA3-205ENST00000559080 STXBP2Q15833 593 aa13.01□□□□□ -0.33
CHRNA3-205ENST00000559080 PTPROQ16827 1216 aa13.01□□□□□ -0.33
CHRNA3-205ENST00000559080 BMP2KLQ5H9B9 411 aa13.01□□□□□ -0.33
CHRNA3-205ENST00000559080 ADHFE1Q8IWW8 467 aa13.01□□□□□ -0.33
CHRNA3-205ENST00000559080 ADGRF4Q8IZF3 695 aa13.01□□□□□ -0.33
CHRNA3-205ENST00000559080 PPTC7Q8NI37 304 aa13.01□□□□□ -0.33
CHRNA3-205ENST00000559080 NSUN6Q8TEA1 469 aaKnown RBP13.01□□□□□ -0.33
CHRNA3-205ENST00000559080 MAP4K1Q92918 833 aa13.01□□□□□ -0.33
CHRNA3-205ENST00000559080 TOP1MTQ969P6 601 aa13.01□□□□□ -0.33
CHRNA3-205ENST00000559080 IWS1Q96ST2 819 aa13.01□□□□□ -0.33
CHRNA3-205ENST00000559080 MAF1Q9H063 256 aa13.01□□□□□ -0.33
CHRNA3-205ENST00000559080 EMSYQ7Z589 1322 aa13.01□□□□□ -0.33
CHRNA3-205ENST00000559080 ZDBF2Q9HCK1 2354 aa13.01□□□□□ -0.33
CHRNA3-205ENST00000559080 PLXNA4Q9HCM2 1894 aa13□□□□□ -0.33
CHRNA3-205ENST00000559080 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13□□□□□ -0.33
CHRNA3-205ENST00000559080 RGS20O76081 388 aa13□□□□□ -0.33
CHRNA3-205ENST00000559080 LINC00271P0C7V0 271 aa13□□□□□ -0.33
CHRNA3-205ENST00000559080 DLX2Q07687 328 aaPredicted RBP13□□□□□ -0.33
CHRNA3-205ENST00000559080 CTC1Q2NKJ3 1217 aa13□□□□□ -0.33
CHRNA3-205ENST00000559080 SERINC5Q86VE9 423 aa13□□□□□ -0.33
CHRNA3-205ENST00000559080 FBXO11Q86XK2 927 aa13□□□□□ -0.33
CHRNA3-205ENST00000559080 TMEM192Q8IY95 271 aa13□□□□□ -0.33
CHRNA3-205ENST00000559080 RMDN3Q96TC7 470 aa13□□□□□ -0.33
CHRNA3-205ENST00000559080 ESYT1Q9BSJ8 1104 aa13□□□□□ -0.33
CHRNA3-205ENST00000559080 NSUN3Q9H649 340 aaKnown RBP13□□□□□ -0.33
CHRNA3-205ENST00000559080 RSPH10B2B2RC85 870 aa12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 RSPH10BP0C881 870 aa12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 HOXC8P31273 242 aa12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 LAMC2Q13753 1193 aa12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 SMAD2Q15796 467 aaKnown RBP12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 QRICH1Q2TAL8 776 aa12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 HSDL1Q3SXM5 330 aa12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 MYSM1Q5VVJ2 828 aa12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 CASC1Q6TDU7 716 aa12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 EP400NLQ6ZTU2 488 aa12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 STOX1Q6ZVD7 989 aa12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 RPAINQ86UA6 219 aa12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 MCF2L2Q86YR7 1114 aa12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 CCDC136Q96JN2 1154 aa12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 C16orf70Q9BSU1 422 aa12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 VAT1LQ9HCJ6 419 aa12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 ANO2Q9NQ90 1003 aa12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 CLDND1Q9NY35 253 aa12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 MUTYHQ9UIF7 546 aa12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 FAM50BQ9Y247 325 aa12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 TAF6LQ9Y6J9 622 aa12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 PLXNA3P51805 1871 aa12.99□□□□□ -0.33
CHRNA3-205ENST00000559080 KLRF2D3W0D1 207 aa12.98□□□□□ -0.33
CHRNA3-205ENST00000559080 MBTPS2O43462 519 aa12.98□□□□□ -0.33
CHRNA3-205ENST00000559080 PPFIA4O75335 1185 aa12.98□□□□□ -0.33
CHRNA3-205ENST00000559080 EIF3JO75822 258 aaKnown RBP12.98□□□□□ -0.33
CHRNA3-205ENST00000559080 NEFLP07196 543 aa12.98□□□□□ -0.33
CHRNA3-205ENST00000559080 NR3C2P08235 984 aa12.98□□□□□ -0.33
CHRNA3-205ENST00000559080 EIF2AK2P19525 551 aaKnown RBP12.98□□□□□ -0.33
CHRNA3-205ENST00000559080 THPOP40225 353 aa12.98□□□□□ -0.33
CHRNA3-205ENST00000559080 GRM4Q14833 912 aa12.98□□□□□ -0.33
CHRNA3-205ENST00000559080 HERC4Q5GLZ8 1057 aaPredicted RBP12.98□□□□□ -0.33
CHRNA3-205ENST00000559080 CATIPQ7Z7H3 387 aa12.98□□□□□ -0.33
CHRNA3-205ENST00000559080 SKAP1Q86WV1 359 aa12.98□□□□□ -0.33
CHRNA3-205ENST00000559080 DHX37Q8IY37 1157 aaKnown RBP12.98□□□□□ -0.33
CHRNA3-205ENST00000559080 STAG2Q8N3U4 1231 aa12.98□□□□□ -0.33
CHRNA3-205ENST00000559080 YME1L1Q96TA2 773 aa12.98□□□□□ -0.33
CHRNA3-205ENST00000559080 LSG1Q9H089 658 aaKnown RBP12.98□□□□□ -0.33
CHRNA3-205ENST00000559080 JMJD4Q9H9V9 463 aa12.98□□□□□ -0.33
CHRNA3-205ENST00000559080 PXMP2Q9NR77 195 aa12.98□□□□□ -0.33
CHRNA3-205ENST00000559080 MAD2L2Q9UI95 211 aa12.98□□□□□ -0.33
CHRNA3-205ENST00000559080 MRPL11Q9Y3B7 192 aaKnown RBP12.98□□□□□ -0.33
CHRNA3-205ENST00000559080 MRVI1Q9Y6F6 885 aa12.98□□□□□ -0.33
CHRNA3-205ENST00000559080 MYO10Q9HD67 2058 aa12.97□□□□□ -0.33
CHRNA3-205ENST00000559080 CACNA1HO95180 2353 aa12.97□□□□□ -0.33
CHRNA3-205ENST00000559080 C5orf67F2Z3F1 127 aa12.97□□□□□ -0.33
CHRNA3-205ENST00000559080 OPLAHO14841 1288 aa12.97□□□□□ -0.33
CHRNA3-205ENST00000559080 UPP2O95045 317 aa12.97□□□□□ -0.33
CHRNA3-205ENST00000559080 SP2Q02086 613 aa12.97□□□□□ -0.33
CHRNA3-205ENST00000559080 HYAL1Q12794 435 aa12.97□□□□□ -0.33
CHRNA3-205ENST00000559080 TRAF1Q13077 416 aa12.97□□□□□ -0.33
CHRNA3-205ENST00000559080 ARHGEF16Q5VV41 709 aa12.97□□□□□ -0.33
CHRNA3-205ENST00000559080 HOMER1Q86YM7 354 aa12.97□□□□□ -0.33
CHRNA3-205ENST00000559080 MB21D2Q8IYB1 491 aaPredicted RBP12.97□□□□□ -0.33
CHRNA3-205ENST00000559080 PRSS33Q8NF86 280 aa12.97□□□□□ -0.33
CHRNA3-205ENST00000559080 MFSD14AQ96MC6 490 aa12.97□□□□□ -0.33
CHRNA3-205ENST00000559080 AMNQ9BXJ7 453 aa12.97□□□□□ -0.33
CHRNA3-205ENST00000559080 UPF3BQ9BZI7 483 aaKnown RBP12.97□□□□□ -0.33
CHRNA3-205ENST00000559080 USP34Q70CQ2 3546 aa12.96□□□□□ -0.33
CHRNA3-205ENST00000559080 PALM3A6NDB9 673 aaPredicted RBP12.96□□□□□ -0.33
CHRNA3-205ENST00000559080 SLC27A2O14975 620 aa12.96□□□□□ -0.33
CHRNA3-205ENST00000559080 ZBTB5O15062 677 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms