RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 CPLX1O14810 134 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 ADAMTS3O15072 1205 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 NKRFO15226 690 aaKnown RBP eCLIP11.05□□□□□ -0.64
SPG11-214ENST00000558989 GGPS1O95749 300 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 SCG2P13521 617 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 RAG1P15918 1043 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 ITGB8P26012 769 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 PURAQ00577 322 aaKnown RBP11.05□□□□□ -0.64
SPG11-214ENST00000558989 SP2Q02086 613 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 ARHGAP1Q07960 439 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 FAAP100Q0VG06 881 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 SAMD3Q8N6K7 520 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 ALG1Q9BT22 464 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 TM6SF1Q9BZW5 370 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 POLR3EQ9NVU0 708 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 GRIN2DO15399 1336 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 ELP1O95163 1332 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 ABCB7O75027 752 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 MMP3P08254 477 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 ZNF286BP0CG31 522 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 UBA1P22314 1058 aaKnown RBP11.05□□□□□ -0.64
SPG11-214ENST00000558989 ABL2P42684 1182 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 AK2P54819 239 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 PKN1Q16512 942 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 PFKFB3Q16875 520 aaPredicted RBP11.05□□□□□ -0.64
SPG11-214ENST00000558989 C8orf34Q49A92 452 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 SPATA33Q96N06 139 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 GDF15Q99988 308 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 MAF1Q9H063 256 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 TRPV6Q9H1D0 765 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 MLXIPQ9HAP2 919 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 PRM3Q9NNZ6 103 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 BARHL2Q9NY43 387 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 VPS54Q9P1Q0 977 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 TELO2Q9Y4R8 837 aa11.05□□□□□ -0.64
SPG11-214ENST00000558989 PIK3CDO00329 1044 aa11.04□□□□□ -0.64
SPG11-214ENST00000558989 PRPF3O43395 683 aaKnown RBP11.04□□□□□ -0.64
SPG11-214ENST00000558989 NEK4P51957 841 aa11.04□□□□□ -0.64
SPG11-214ENST00000558989 RCAN1P53805 252 aa11.04□□□□□ -0.64
SPG11-214ENST00000558989 NTRK3Q16288 839 aa11.04□□□□□ -0.64
SPG11-214ENST00000558989 NBPF20Q3BBV1 942 aa11.04□□□□□ -0.64
SPG11-214ENST00000558989 GNPTABQ3T906 1256 aa11.04□□□□□ -0.64
SPG11-214ENST00000558989 ZNF662Q6ZS27 426 aa11.04□□□□□ -0.64
SPG11-214ENST00000558989 CYFIP1Q7L576 1253 aa11.04□□□□□ -0.64
SPG11-214ENST00000558989 RASGRP4Q8TDF6 673 aa11.04□□□□□ -0.64
SPG11-214ENST00000558989 GIPC2Q8TF65 315 aa11.04□□□□□ -0.64
SPG11-214ENST00000558989 AIFM3Q96NN9 605 aa11.04□□□□□ -0.64
SPG11-214ENST00000558989 MTG1Q9BT17 334 aaPredicted RBP11.04□□□□□ -0.64
SPG11-214ENST00000558989 SLKQ9H2G2 1235 aaPredicted RBP11.04□□□□□ -0.64
SPG11-214ENST00000558989 RIC8AQ9NPQ8 531 aa11.04□□□□□ -0.64
SPG11-214ENST00000558989 TRMT13Q9NUP7 481 aaKnown RBP11.04□□□□□ -0.64
SPG11-214ENST00000558989 TPCN1Q9ULQ1 816 aa11.04□□□□□ -0.64
SPG11-214ENST00000558989 TLR3O15455 904 aaKnown RBP11.03□□□□□ -0.64
SPG11-214ENST00000558989 CABYRO75952 493 aa11.03□□□□□ -0.64
SPG11-214ENST00000558989 ATG7O95352 703 aa11.03□□□□□ -0.64
SPG11-214ENST00000558989 CLCN1P35523 988 aa11.03□□□□□ -0.64
SPG11-214ENST00000558989 CDK7P50613 346 aa11.03□□□□□ -0.64
SPG11-214ENST00000558989 FOSBP53539 338 aa11.03□□□□□ -0.64
SPG11-214ENST00000558989 SSRP1Q08945 709 aaKnown RBP11.03□□□□□ -0.64
SPG11-214ENST00000558989 SEMA3FQ13275 785 aa11.03□□□□□ -0.64
SPG11-214ENST00000558989 HSDL1Q3SXM5 330 aa11.03□□□□□ -0.64
SPG11-214ENST00000558989 C1orf53Q5VUE5 145 aa11.03□□□□□ -0.64
SPG11-214ENST00000558989 PCNX4Q63HM2 1172 aa11.03□□□□□ -0.64
SPG11-214ENST00000558989 FAM126BQ8IXS8 530 aa11.03□□□□□ -0.64
SPG11-214ENST00000558989 FBXL16Q8N461 479 aa11.03□□□□□ -0.64
SPG11-214ENST00000558989 NECAB1Q8N987 351 aa11.03□□□□□ -0.64
SPG11-214ENST00000558989 ANO3Q9BYT9 981 aa11.03□□□□□ -0.64
SPG11-214ENST00000558989 FRMPD4Q14CM0 1322 aa11.03□□□□□ -0.64
SPG11-214ENST00000558989 UMODL1Q5DID0 1318 aa11.03□□□□□ -0.64
SPG11-214ENST00000558989 MROH7Q68CQ1 1323 aa11.03□□□□□ -0.64
SPG11-214ENST00000558989 B4GALT4O60513 344 aa11.02□□□□□ -0.64
SPG11-214ENST00000558989 LARGE1O95461 756 aa11.02□□□□□ -0.64
SPG11-214ENST00000558989 CYP2C9P11712 490 aa11.02□□□□□ -0.64
SPG11-214ENST00000558989 IFNAR1P17181 557 aa11.02□□□□□ -0.64
SPG11-214ENST00000558989 CYP2C18P33260 490 aa11.02□□□□□ -0.64
SPG11-214ENST00000558989 PSEN1P49768 467 aa11.02□□□□□ -0.64
SPG11-214ENST00000558989 ANAPC15P60006 121 aa11.02□□□□□ -0.64
SPG11-214ENST00000558989 NKX3-2P78367 333 aa11.02□□□□□ -0.64
SPG11-214ENST00000558989 SCRN1Q12765 414 aa11.02□□□□□ -0.64
SPG11-214ENST00000558989 LAMC2Q13753 1193 aa11.02□□□□□ -0.64
SPG11-214ENST00000558989 CELF3Q5SZQ8 465 aaKnown RBP11.02□□□□□ -0.64
SPG11-214ENST00000558989 UTP14CQ5TAP6 766 aaKnown RBP11.02□□□□□ -0.64
SPG11-214ENST00000558989 MYSM1Q5VVJ2 828 aa11.02□□□□□ -0.64
SPG11-214ENST00000558989 ANKRD33Q7Z3H0 272 aa11.02□□□□□ -0.64
SPG11-214ENST00000558989 NLRX1Q86UT6 975 aa11.02□□□□□ -0.64
SPG11-214ENST00000558989 TRIM22Q8IYM9 498 aa11.02□□□□□ -0.64
SPG11-214ENST00000558989 CYP2W1Q8TAV3 490 aa11.02□□□□□ -0.64
SPG11-214ENST00000558989 ZNF274Q96GC6 653 aaPredicted RBP11.02□□□□□ -0.64
SPG11-214ENST00000558989 NID2Q14112 1375 aa11.02□□□□□ -0.65
SPG11-214ENST00000558989 MYH9P35579 1960 aaKnown RBP11.02□□□□□ -0.65
SPG11-214ENST00000558989 WDR81Q562E7 1941 aa11.02□□□□□ -0.65
SPG11-214ENST00000558989 NOP56O00567 594 aaKnown RBP11.02□□□□□ -0.65
SPG11-214ENST00000558989 ATP9AO75110 1047 aa11.02□□□□□ -0.65
SPG11-214ENST00000558989 ITGB5P18084 799 aa11.02□□□□□ -0.65
SPG11-214ENST00000558989 ZNF76P36508 570 aa11.02□□□□□ -0.65
SPG11-214ENST00000558989 CCL23P55773 120 aa11.02□□□□□ -0.65
SPG11-214ENST00000558989 EVCP57679 992 aa11.02□□□□□ -0.65
SPG11-214ENST00000558989 DGKDQ16760 1214 aa11.02□□□□□ -0.65
SPG11-214ENST00000558989 PPP1R18Q6NYC8 613 aa11.02□□□□□ -0.65
SPG11-214ENST00000558989 INPP4AQ96PE3 977 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms