RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 CR1LQ2VPA4 569 aa5.58□□□□□ -1.52
VPS13C-207ENST00000558919 FAM26EQ8N5C1 309 aa5.58□□□□□ -1.52
VPS13C-207ENST00000558919 TP53I13Q8NBR0 393 aaPredicted RBP5.58□□□□□ -1.52
VPS13C-207ENST00000558919 FBXW5Q969U6 566 aa5.58□□□□□ -1.52
VPS13C-207ENST00000558919 NOX5Q96PH1 765 aa5.58□□□□□ -1.52
VPS13C-207ENST00000558919 GORASP1Q9BQQ3 440 aa5.58□□□□□ -1.52
VPS13C-207ENST00000558919 C11orf84Q9BUA3 381 aaPredicted RBP5.58□□□□□ -1.52
VPS13C-207ENST00000558919 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.57□□□□□ -1.52
VPS13C-207ENST00000558919 GSTA4O15217 222 aa5.57□□□□□ -1.52
VPS13C-207ENST00000558919 NKRFO15226 690 aaKnown RBP eCLIP5.57□□□□□ -1.52
VPS13C-207ENST00000558919 CRTAMO95727 393 aa5.57□□□□□ -1.52
VPS13C-207ENST00000558919 LRG1P02750 347 aa5.57□□□□□ -1.52
VPS13C-207ENST00000558919 APPP05067 770 aa5.57□□□□□ -1.52
VPS13C-207ENST00000558919 STAT5AP42229 794 aa5.57□□□□□ -1.52
VPS13C-207ENST00000558919 DLX2Q07687 328 aaPredicted RBP5.57□□□□□ -1.52
VPS13C-207ENST00000558919 VMACQ2NL98 169 aa5.57□□□□□ -1.52
VPS13C-207ENST00000558919 TEPPQ6URK8 271 aa5.57□□□□□ -1.52
VPS13C-207ENST00000558919 C16orf59Q7L2K0 433 aa5.57□□□□□ -1.52
VPS13C-207ENST00000558919 MARCH10Q8NA82 808 aaPredicted RBP5.57□□□□□ -1.52
VPS13C-207ENST00000558919 KYQ8NBH2 561 aa5.57□□□□□ -1.52
VPS13C-207ENST00000558919 PCDH19Q8TAB3 1148 aa5.57□□□□□ -1.52
VPS13C-207ENST00000558919 ZBTB8AQ96BR9 441 aa5.57□□□□□ -1.52
VPS13C-207ENST00000558919 KCNC2Q96PR1 638 aa5.57□□□□□ -1.52
VPS13C-207ENST00000558919 SLC52A2Q9HAB3 445 aa5.57□□□□□ -1.52
VPS13C-207ENST00000558919 NDOR1Q9UHB4 597 aa5.57□□□□□ -1.52
VPS13C-207ENST00000558919 DSEQ9UL01 958 aa5.57□□□□□ -1.52
VPS13C-207ENST00000558919 PCDHA9Q9Y5H5 950 aa5.57□□□□□ -1.52
VPS13C-207ENST00000558919 PLD2O14939 933 aa5.56□□□□□ -1.52
VPS13C-207ENST00000558919 SMARCA5O60264 1052 aaPredicted RBP5.56□□□□□ -1.52
VPS13C-207ENST00000558919 TRIM13O60858 407 aa5.56□□□□□ -1.52
VPS13C-207ENST00000558919 BMP7P18075 431 aa5.56□□□□□ -1.52
VPS13C-207ENST00000558919 EPHA5P54756 1037 aa5.56□□□□□ -1.52
VPS13C-207ENST00000558919 ITGA1P56199 1179 aa5.56□□□□□ -1.52
VPS13C-207ENST00000558919 TUSC3Q13454 348 aa5.56□□□□□ -1.52
VPS13C-207ENST00000558919 GPR19Q15760 415 aa5.56□□□□□ -1.52
VPS13C-207ENST00000558919 FAM47CQ5HY64 1035 aa5.56□□□□□ -1.52
VPS13C-207ENST00000558919 LIPIQ6XZB0 460 aa5.56□□□□□ -1.52
VPS13C-207ENST00000558919 TTLL7Q6ZT98 887 aa5.56□□□□□ -1.52
VPS13C-207ENST00000558919 SP8Q8IXZ3 490 aa5.56□□□□□ -1.52
VPS13C-207ENST00000558919 TTLL6Q8N841 843 aa5.56□□□□□ -1.52
VPS13C-207ENST00000558919 SLC7A14Q8TBB6 771 aa5.56□□□□□ -1.52
VPS13C-207ENST00000558919 ZNF526Q8TF50 670 aaPredicted RBP5.56□□□□□ -1.52
VPS13C-207ENST00000558919 CLEC4DQ8WXI8 215 aa5.56□□□□□ -1.52
VPS13C-207ENST00000558919 PIF1Q9H611 641 aa5.56□□□□□ -1.52
VPS13C-207ENST00000558919 NCOA5Q9HCD5 579 aaKnown RBP5.56□□□□□ -1.52
VPS13C-207ENST00000558919 LUC7LQ9NQ29 371 aaKnown RBP5.56□□□□□ -1.52
VPS13C-207ENST00000558919 SPATA6Q9NWH7 488 aaPredicted RBP5.56□□□□□ -1.52
VPS13C-207ENST00000558919 SFMBT1Q9UHJ3 866 aa5.56□□□□□ -1.52
VPS13C-207ENST00000558919 RAPGEFL1Q9UHV5 662 aa5.56□□□□□ -1.52
VPS13C-207ENST00000558919 SASH1O94885 1247 aa5.55□□□□□ -1.52
VPS13C-207ENST00000558919 PYGMP11217 842 aa5.55□□□□□ -1.52
VPS13C-207ENST00000558919 THBS2P35442 1172 aa5.55□□□□□ -1.52
VPS13C-207ENST00000558919 ST5P78524 1137 aa5.55□□□□□ -1.52
VPS13C-207ENST00000558919 SMAD4Q13485 552 aaKnown RBP5.55□□□□□ -1.52
VPS13C-207ENST00000558919 SQSTM1Q13501 440 aa5.55□□□□□ -1.52
VPS13C-207ENST00000558919 KCTD1Q719H9 257 aa5.55□□□□□ -1.52
VPS13C-207ENST00000558919 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.55□□□□□ -1.52
VPS13C-207ENST00000558919 ZC3H7AQ8IWR0 971 aaKnown RBP5.55□□□□□ -1.52
VPS13C-207ENST00000558919 NLGN4XQ8N0W4 816 aa5.55□□□□□ -1.52
VPS13C-207ENST00000558919 CARFQ8N187 725 aa5.55□□□□□ -1.52
VPS13C-207ENST00000558919 SH3TC2Q8TF17 1288 aa5.55□□□□□ -1.52
VPS13C-207ENST00000558919 MAGEB10Q96LZ2 347 aaPredicted RBP5.55□□□□□ -1.52
VPS13C-207ENST00000558919 PARD6AQ9NPB6 346 aa5.55□□□□□ -1.52
VPS13C-207ENST00000558919 CATSPERZQ9NTU4 200 aa5.55□□□□□ -1.52
VPS13C-207ENST00000558919 TMEM260Q9NX78 707 aa5.55□□□□□ -1.52
VPS13C-207ENST00000558919 NTMQ9P121 344 aa5.55□□□□□ -1.52
VPS13C-207ENST00000558919 TCRBV5S4A2TA0A5A2 114 aa5.54□□□□□ -1.52
VPS13C-207ENST00000558919 NPTXRO95502 500 aa5.54□□□□□ -1.52
VPS13C-207ENST00000558919 SRGAP2CP0DJJ0 459 aa5.54□□□□□ -1.52
VPS13C-207ENST00000558919 FAHP16930 419 aa5.54□□□□□ -1.52
VPS13C-207ENST00000558919 RPL13P26373 211 aaKnown RBP5.54□□□□□ -1.52
VPS13C-207ENST00000558919 SLURP1P55000 103 aa5.54□□□□□ -1.52
VPS13C-207ENST00000558919 GRIN1Q05586 938 aa5.54□□□□□ -1.52
VPS13C-207ENST00000558919 ADAM9Q13443 819 aa5.54□□□□□ -1.52
VPS13C-207ENST00000558919 CRY1Q16526 586 aa5.54□□□□□ -1.52
VPS13C-207ENST00000558919 PAN2Q504Q3 1202 aaKnown RBP5.54□□□□□ -1.52
VPS13C-207ENST00000558919 FNDC3BQ53EP0 1204 aaKnown RBP5.54□□□□□ -1.52
VPS13C-207ENST00000558919 TTLL10Q6ZVT0 673 aa5.54□□□□□ -1.52
VPS13C-207ENST00000558919 SH3RF2Q8TEC5 729 aa5.54□□□□□ -1.52
VPS13C-207ENST00000558919 SCLYQ96I15 445 aa5.54□□□□□ -1.52
VPS13C-207ENST00000558919 TMEM209Q96SK2 561 aa5.54□□□□□ -1.52
VPS13C-207ENST00000558919 SYT3Q9BQG1 590 aa5.54□□□□□ -1.52
VPS13C-207ENST00000558919 ZCCHC4Q9H5U6 513 aa5.54□□□□□ -1.52
VPS13C-207ENST00000558919 TRIM39Q9HCM9 518 aa5.54□□□□□ -1.52
VPS13C-207ENST00000558919 TELO2Q9Y4R8 837 aa5.54□□□□□ -1.52
VPS13C-207ENST00000558919 CCDC66A2RUB6 948 aa5.53□□□□□ -1.52
VPS13C-207ENST00000558919 RASGRP1O95267 797 aa5.53□□□□□ -1.52
VPS13C-207ENST00000558919 LTFP02788 710 aa5.53□□□□□ -1.52
VPS13C-207ENST00000558919 CKMP06732 381 aa5.53□□□□□ -1.52
VPS13C-207ENST00000558919 INHBBP09529 407 aa5.53□□□□□ -1.52
VPS13C-207ENST00000558919 KCNC1P48547 511 aa5.53□□□□□ -1.52
VPS13C-207ENST00000558919 SARSP49591 514 aaKnown RBP5.53□□□□□ -1.52
VPS13C-207ENST00000558919 LACTBP83111 547 aaPredicted RBP5.53□□□□□ -1.52
VPS13C-207ENST00000558919 PRR31Q5SQ13 230 aa5.53□□□□□ -1.52
VPS13C-207ENST00000558919 ARHGAP36Q6ZRI8 547 aa5.53□□□□□ -1.52
VPS13C-207ENST00000558919 BRAPQ7Z569 592 aa5.53□□□□□ -1.52
VPS13C-207ENST00000558919 RBM12BQ8IXT5 1001 aaKnown RBP5.53□□□□□ -1.52
VPS13C-207ENST00000558919 WRNIP1Q96S55 665 aa5.53□□□□□ -1.52
VPS13C-207ENST00000558919 KANSL2Q9H9L4 492 aa5.53□□□□□ -1.52
VPS13C-207ENST00000558919 CBLCQ9ULV8 474 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms