RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 GPRASP2Q96D09 838 aa17.78■□□□□ 0.44
CSHL1-208ENST00000558609 USP26Q9BXU7 913 aa17.78■□□□□ 0.44
CSHL1-208ENST00000558609 RIC8AQ9NPQ8 531 aa17.78■□□□□ 0.44
CSHL1-208ENST00000558609 BARHL2Q9NY43 387 aa17.78■□□□□ 0.44
CSHL1-208ENST00000558609 CXXC1Q9P0U4 656 aaPredicted RBP17.78■□□□□ 0.44
CSHL1-208ENST00000558609 NAP1L2Q9ULW6 460 aaPredicted RBP17.78■□□□□ 0.44
CSHL1-208ENST00000558609 NID2Q14112 1375 aa17.78■□□□□ 0.44
CSHL1-208ENST00000558609 STXBP3O00186 592 aa17.77■□□□□ 0.44
CSHL1-208ENST00000558609 NOP56O00567 594 aaKnown RBP17.77■□□□□ 0.44
CSHL1-208ENST00000558609 ITGB5P18084 799 aa17.77■□□□□ 0.44
CSHL1-208ENST00000558609 DNAJB2P25686 324 aa17.77■□□□□ 0.44
CSHL1-208ENST00000558609 RBL2Q08999 1139 aa17.77■□□□□ 0.44
CSHL1-208ENST00000558609 CCDC155Q8N6L0 562 aa17.77■□□□□ 0.44
CSHL1-208ENST00000558609 MYLIPQ8WY64 445 aa17.77■□□□□ 0.44
CSHL1-208ENST00000558609 CDHR1Q96JP9 859 aa17.77■□□□□ 0.44
CSHL1-208ENST00000558609 GPR20Q99678 358 aa17.77■□□□□ 0.44
CSHL1-208ENST00000558609 EHMT1Q9H9B1 1298 aa17.77■□□□□ 0.44
CSHL1-208ENST00000558609 UBIAD1Q9Y5Z9 338 aa17.77■□□□□ 0.44
CSHL1-208ENST00000558609 H3BRB1 525 aa17.76■□□□□ 0.43
CSHL1-208ENST00000558609 MAFGO15525 162 aa17.76■□□□□ 0.43
CSHL1-208ENST00000558609 FOSP01100 380 aaPredicted RBP17.76■□□□□ 0.43
CSHL1-208ENST00000558609 LGALS2P05162 132 aa17.76■□□□□ 0.43
CSHL1-208ENST00000558609 ADCY7P51828 1080 aa17.76■□□□□ 0.43
CSHL1-208ENST00000558609 EVCP57679 992 aa17.76■□□□□ 0.43
CSHL1-208ENST00000558609 PTK7Q13308 1070 aa17.76■□□□□ 0.43
CSHL1-208ENST00000558609 PFKFB3Q16875 520 aaPredicted RBP17.76■□□□□ 0.43
CSHL1-208ENST00000558609 DEFB128Q7Z7B8 93 aa17.76■□□□□ 0.43
CSHL1-208ENST00000558609 AFAP1L1Q8TED9 768 aa17.76■□□□□ 0.43
CSHL1-208ENST00000558609 DHX38Q92620 1227 aaKnown RBP17.76■□□□□ 0.43
CSHL1-208ENST00000558609 GLT8D2Q9H1C3 349 aa17.76■□□□□ 0.43
CSHL1-208ENST00000558609 TUT1Q9H6E5 874 aaKnown RBP17.76■□□□□ 0.43
CSHL1-208ENST00000558609 ZSWIM6Q9HCJ5 1215 aa17.76■□□□□ 0.43
CSHL1-208ENST00000558609 TRIP12Q14669 1992 aaPredicted RBP17.75■□□□□ 0.43
CSHL1-208ENST00000558609 SMCO2A6NFE2 343 aa17.75■□□□□ 0.43
CSHL1-208ENST00000558609 GRXCR1A8MXD5 290 aa17.75■□□□□ 0.43
CSHL1-208ENST00000558609 KCNA2P16389 499 aa17.75■□□□□ 0.43
CSHL1-208ENST00000558609 RUFY3Q7L099 469 aa17.75■□□□□ 0.43
CSHL1-208ENST00000558609 TIFAQ96CG3 184 aa17.75■□□□□ 0.43
CSHL1-208ENST00000558609 PBX4Q9BYU1 374 aa17.75■□□□□ 0.43
CSHL1-208ENST00000558609 JADE2Q9NQC1 790 aa17.75■□□□□ 0.43
CSHL1-208ENST00000558609 MUC3AQ02505 3323 aa17.75■□□□□ 0.43
CSHL1-208ENST00000558609 SCN5AQ14524 2016 aa17.74■□□□□ 0.43
CSHL1-208ENST00000558609 ATP9AO75110 1047 aa17.74■□□□□ 0.43
CSHL1-208ENST00000558609 PARNO95453 639 aaKnown RBP17.74■□□□□ 0.43
CSHL1-208ENST00000558609 SCG2P13521 617 aa17.74■□□□□ 0.43
CSHL1-208ENST00000558609 SELPP16109 830 aa17.74■□□□□ 0.43
CSHL1-208ENST00000558609 HOXC8P31273 242 aa17.74■□□□□ 0.43
CSHL1-208ENST00000558609 CLK2P49760 499 aaKnown RBP17.74■□□□□ 0.43
CSHL1-208ENST00000558609 MTMR1Q13613 665 aa17.74■□□□□ 0.43
CSHL1-208ENST00000558609 HIC1Q14526 733 aa17.74■□□□□ 0.43
CSHL1-208ENST00000558609 TRIM71Q2Q1W2 868 aaKnown RBP17.74■□□□□ 0.43
CSHL1-208ENST00000558609 TM6SF1Q9BZW5 370 aa17.74■□□□□ 0.43
CSHL1-208ENST00000558609 SLC4A7Q9Y6M7 1214 aa17.74■□□□□ 0.43
CSHL1-208ENST00000558609 TANC1Q9C0D5 1861 aa17.73■□□□□ 0.43
CSHL1-208ENST00000558609 DOCK5Q9H7D0 1870 aa17.73■□□□□ 0.43
CSHL1-208ENST00000558609 PRPF3O43395 683 aaKnown RBP17.73■□□□□ 0.43
CSHL1-208ENST00000558609 CKBP12277 381 aa17.73■□□□□ 0.43
CSHL1-208ENST00000558609 ACTN1P12814 892 aa17.73■□□□□ 0.43
CSHL1-208ENST00000558609 PDIA3P30101 505 aaKnown RBP17.73■□□□□ 0.43
CSHL1-208ENST00000558609 PBX2P40425 430 aa17.73■□□□□ 0.43
CSHL1-208ENST00000558609 ZNF200P98182 395 aaPredicted RBP17.73■□□□□ 0.43
CSHL1-208ENST00000558609 AP3B2Q13367 1082 aa17.73■□□□□ 0.43
CSHL1-208ENST00000558609 GPNMBQ14956 572 aa17.73■□□□□ 0.43
CSHL1-208ENST00000558609 RAB30Q15771 203 aa17.73■□□□□ 0.43
CSHL1-208ENST00000558609 NTRK3Q16288 839 aa17.73■□□□□ 0.43
CSHL1-208ENST00000558609 PKN1Q16512 942 aa17.73■□□□□ 0.43
CSHL1-208ENST00000558609 LRRC8DQ7L1W4 858 aa17.73■□□□□ 0.43
CSHL1-208ENST00000558609 MXRA8Q9BRK3 442 aa17.73■□□□□ 0.43
CSHL1-208ENST00000558609 PRDM6Q9NQX0 595 aa17.73■□□□□ 0.43
CSHL1-208ENST00000558609 TELO2Q9Y4R8 837 aa17.73■□□□□ 0.43
CSHL1-208ENST00000558609 CYP46A1Q9Y6A2 500 aa17.73■□□□□ 0.43
CSHL1-208ENST00000558609 TTC28Q96AY4 2481 aa17.72■□□□□ 0.43
CSHL1-208ENST00000558609 ESYT2A0FGR8 921 aa17.72■□□□□ 0.43
CSHL1-208ENST00000558609 C17orf102A2RUQ5 167 aa17.72■□□□□ 0.43
CSHL1-208ENST00000558609 ZBBXA8MT70 800 aa17.72■□□□□ 0.43
CSHL1-208ENST00000558609 SMIM10L2AP0DMW4 78 aa17.72■□□□□ 0.43
CSHL1-208ENST00000558609 SMIM10L2BP0DMW5 78 aa17.72■□□□□ 0.43
CSHL1-208ENST00000558609 TOB2Q14106 344 aaPredicted RBP17.72■□□□□ 0.43
CSHL1-208ENST00000558609 SERINC5Q86VE9 423 aa17.72■□□□□ 0.43
CSHL1-208ENST00000558609 ANO3Q9BYT9 981 aa17.72■□□□□ 0.43
CSHL1-208ENST00000558609 FTOQ9C0B1 505 aaKnown RBP eCLIP17.72■□□□□ 0.43
CSHL1-208ENST00000558609 ZMYND12Q9H0C1 365 aa17.72■□□□□ 0.43
CSHL1-208ENST00000558609 RNPEPQ9H4A4 650 aa17.72■□□□□ 0.43
CSHL1-208ENST00000558609 ZNF576Q9H609 170 aa17.72■□□□□ 0.43
CSHL1-208ENST00000558609 MSRAQ9UJ68 235 aa17.72■□□□□ 0.43
CSHL1-208ENST00000558609 ZNF215Q9UL58 517 aaPredicted RBP17.72■□□□□ 0.43
CSHL1-208ENST00000558609 TET1Q8NFU7 2136 aa17.71■□□□□ 0.43
CSHL1-208ENST00000558609 IFNAR1P17181 557 aa17.71■□□□□ 0.43
CSHL1-208ENST00000558609 SREBF1P36956 1147 aa17.71■□□□□ 0.43
CSHL1-208ENST00000558609 SP4Q02446 784 aa17.71■□□□□ 0.43
CSHL1-208ENST00000558609 UTP14CQ5TAP6 766 aaKnown RBP17.71■□□□□ 0.43
CSHL1-208ENST00000558609 MCTP2Q6DN12 878 aa17.71■□□□□ 0.43
CSHL1-208ENST00000558609 TRAF7Q6Q0C0 670 aa17.71■□□□□ 0.43
CSHL1-208ENST00000558609 CCDC12Q8WUD4 166 aaPredicted RBP17.71■□□□□ 0.43
CSHL1-208ENST00000558609 SEPT1Q8WYJ6 367 aa17.71■□□□□ 0.43
CSHL1-208ENST00000558609 WNT8BQ93098 351 aa17.71■□□□□ 0.43
CSHL1-208ENST00000558609 PGBD1Q96JS3 809 aa17.71■□□□□ 0.43
CSHL1-208ENST00000558609 RNF26Q9BY78 433 aaPredicted RBP17.71■□□□□ 0.43
CSHL1-208ENST00000558609 KCNH7Q9NS40 1196 aa17.71■□□□□ 0.43
CSHL1-208ENST00000558609 TMEM260Q9NX78 707 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms