RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 DNM1LO00429 736 aa19.78■□□□□ 0.76
TPM1-214ENST00000558544 MSH4O15457 936 aa19.78■□□□□ 0.76
TPM1-214ENST00000558544 CST5P28325 142 aaPredicted RBP19.78■□□□□ 0.76
TPM1-214ENST00000558544 MNX1P50219 401 aaPredicted RBP19.78■□□□□ 0.76
TPM1-214ENST00000558544 CPT1AP50416 773 aa19.78■□□□□ 0.76
TPM1-214ENST00000558544 NKX3-2P78367 333 aa19.78■□□□□ 0.76
TPM1-214ENST00000558544 SP4Q02446 784 aa19.78■□□□□ 0.76
TPM1-214ENST00000558544 LAMC2Q13753 1193 aa19.78■□□□□ 0.76
TPM1-214ENST00000558544 GNASQ5JWF2 1037 aa19.78■□□□□ 0.76
TPM1-214ENST00000558544 POTEDQ86YR6 584 aa19.78■□□□□ 0.76
TPM1-214ENST00000558544 ANKLE1Q8NAG6 615 aa19.78■□□□□ 0.76
TPM1-214ENST00000558544 GIMAP8Q8ND71 665 aaPredicted RBP19.78■□□□□ 0.76
TPM1-214ENST00000558544 DIS3LQ8TF46 1054 aaKnown RBP19.78■□□□□ 0.76
TPM1-214ENST00000558544 AFG1LQ8WV93 481 aa19.78■□□□□ 0.76
TPM1-214ENST00000558544 SPATA33Q96N06 139 aa19.78■□□□□ 0.76
TPM1-214ENST00000558544 DDX39AO00148 427 aaKnown RBP19.77■□□□□ 0.76
TPM1-214ENST00000558544 IPO5O00410 1097 aaKnown RBP19.77■□□□□ 0.76
TPM1-214ENST00000558544 CAPN2P17655 700 aa19.77■□□□□ 0.76
TPM1-214ENST00000558544 NBR1Q14596 966 aa19.77■□□□□ 0.76
TPM1-214ENST00000558544 KCNA10Q16322 511 aa19.77■□□□□ 0.76
TPM1-214ENST00000558544 HSDL1Q3SXM5 330 aa19.77■□□□□ 0.76
TPM1-214ENST00000558544 METTL7BQ6UX53 244 aa19.77■□□□□ 0.76
TPM1-214ENST00000558544 GJA10Q969M2 543 aa19.77■□□□□ 0.76
TPM1-214ENST00000558544 SDF4Q9BRK5 362 aa19.77■□□□□ 0.76
TPM1-214ENST00000558544 TELO2Q9Y4R8 837 aa19.77■□□□□ 0.76
TPM1-214ENST00000558544 NFASCO94856 1347 aa19.76■□□□□ 0.75
TPM1-214ENST00000558544 ALPK3Q96L96 1907 aa19.76■□□□□ 0.75
TPM1-214ENST00000558544 MYH9P35579 1960 aaKnown RBP19.76■□□□□ 0.75
TPM1-214ENST00000558544 MMP3P08254 477 aa19.76■□□□□ 0.75
TPM1-214ENST00000558544 TTC38Q5R3I4 469 aa19.76■□□□□ 0.75
TPM1-214ENST00000558544 CCSAPQ6IQ19 270 aaPredicted RBP19.76■□□□□ 0.75
TPM1-214ENST00000558544 PPTC7Q8NI37 304 aa19.76■□□□□ 0.75
TPM1-214ENST00000558544 JPH1Q9HDC5 661 aaPredicted RBP19.76■□□□□ 0.75
TPM1-214ENST00000558544 SCN10AQ9Y5Y9 1956 aa19.75■□□□□ 0.75
TPM1-214ENST00000558544 A6NJR5 290 aa19.75■□□□□ 0.75
TPM1-214ENST00000558544 NOP56O00567 594 aaKnown RBP19.75■□□□□ 0.75
TPM1-214ENST00000558544 CAPN15O75808 1086 aa19.75■□□□□ 0.75
TPM1-214ENST00000558544 ASGR1P07306 291 aa19.75■□□□□ 0.75
TPM1-214ENST00000558544 MYL3P08590 195 aa19.75■□□□□ 0.75
TPM1-214ENST00000558544 MCM7P33993 719 aa19.75■□□□□ 0.75
TPM1-214ENST00000558544 TRAPPC10P48553 1259 aa19.75■□□□□ 0.75
TPM1-214ENST00000558544 TOB1P50616 345 aaPredicted RBP19.75■□□□□ 0.75
TPM1-214ENST00000558544 RESTQ13127 1097 aa19.75■□□□□ 0.75
TPM1-214ENST00000558544 BRDTQ58F21 947 aaPredicted RBP19.75■□□□□ 0.75
TPM1-214ENST00000558544 BRAPQ7Z569 592 aa19.75■□□□□ 0.75
TPM1-214ENST00000558544 PCSK9Q8NBP7 692 aaKnown RBP19.75■□□□□ 0.75
TPM1-214ENST00000558544 ETNPPLQ8TBG4 499 aa19.75■□□□□ 0.75
TPM1-214ENST00000558544 SLC5A5Q92911 643 aa19.75■□□□□ 0.75
TPM1-214ENST00000558544 PAWRQ96IZ0 340 aaKnown RBP19.75■□□□□ 0.75
TPM1-214ENST00000558544 SLC9A2Q9UBY0 812 aa19.75■□□□□ 0.75
TPM1-214ENST00000558544 DHX15O43143 795 aaKnown RBP19.74■□□□□ 0.75
TPM1-214ENST00000558544 ZEB2O60315 1214 aa19.74■□□□□ 0.75
TPM1-214ENST00000558544 NEMFO60524 1076 aa19.74■□□□□ 0.75
TPM1-214ENST00000558544 PKP1Q13835 747 aa19.74■□□□□ 0.75
TPM1-214ENST00000558544 ZNF174Q15697 407 aa19.74■□□□□ 0.75
TPM1-214ENST00000558544 LRCH2Q5VUJ6 765 aa19.74■□□□□ 0.75
TPM1-214ENST00000558544 FOXD4L5Q5VV16 416 aaPredicted RBP19.74■□□□□ 0.75
TPM1-214ENST00000558544 FOXD4L4Q8WXT5 416 aaPredicted RBP19.74■□□□□ 0.75
TPM1-214ENST00000558544 FERMT2Q96AC1 680 aa19.74■□□□□ 0.75
TPM1-214ENST00000558544 TSEN34Q9BSV6 310 aaKnown RBP19.74■□□□□ 0.75
TPM1-214ENST00000558544 KCNMB3Q9NPA1 279 aa19.74■□□□□ 0.75
TPM1-214ENST00000558544 TBC1D22BQ9NU19 505 aa19.74■□□□□ 0.75
TPM1-214ENST00000558544 PHF24Q9UPV7 400 aa19.74■□□□□ 0.75
TPM1-214ENST00000558544 MOXD2PA6NHM9 499 aa19.73■□□□□ 0.75
TPM1-214ENST00000558544 ACLYP53396 1101 aa19.73■□□□□ 0.75
TPM1-214ENST00000558544 RILPL1Q5EBL4 403 aa19.73■□□□□ 0.75
TPM1-214ENST00000558544 CXCL17Q6UXB2 119 aa19.73■□□□□ 0.75
TPM1-214ENST00000558544 GPR20Q99678 358 aa19.73■□□□□ 0.75
TPM1-214ENST00000558544 POLR3EQ9NVU0 708 aa19.73■□□□□ 0.75
TPM1-214ENST00000558544 PCDHB6Q9Y5E3 794 aa19.73■□□□□ 0.75
TPM1-214ENST00000558544 A0A1W2PQ45 241 aaPredicted RBP19.72■□□□□ 0.75
TPM1-214ENST00000558544 A0A1W2PQY0 241 aa19.72■□□□□ 0.75
TPM1-214ENST00000558544 MARCH6O60337 910 aa19.72■□□□□ 0.75
TPM1-214ENST00000558544 GAS7O60861 476 aa19.72■□□□□ 0.75
TPM1-214ENST00000558544 ZNF286BP0CG31 522 aa19.72■□□□□ 0.75
TPM1-214ENST00000558544 PURAQ00577 322 aaKnown RBP19.72■□□□□ 0.75
TPM1-214ENST00000558544 CALCRLQ16602 461 aa19.72■□□□□ 0.75
TPM1-214ENST00000558544 DGKDQ16760 1214 aa19.72■□□□□ 0.75
TPM1-214ENST00000558544 NECAB2Q7Z6G3 386 aa19.72■□□□□ 0.75
TPM1-214ENST00000558544 UBE2Q1Q7Z7E8 422 aa19.72■□□□□ 0.75
TPM1-214ENST00000558544 HAS1Q92839 578 aa19.72■□□□□ 0.75
TPM1-214ENST00000558544 RIT2Q99578 217 aa19.72■□□□□ 0.75
TPM1-214ENST00000558544 TEKT3Q9BXF9 490 aa19.72■□□□□ 0.75
TPM1-214ENST00000558544 SENP6Q9GZR1 1112 aaPredicted RBP19.72■□□□□ 0.75
TPM1-214ENST00000558544 TMEM60Q9H2L4 133 aa19.72■□□□□ 0.75
TPM1-214ENST00000558544 C11orf49Q9H6J7 331 aa19.72■□□□□ 0.75
TPM1-214ENST00000558544 TCEAL9Q9UHQ7 104 aa19.72■□□□□ 0.75
TPM1-214ENST00000558544 ELP1O95163 1332 aa19.72■□□□□ 0.75
TPM1-214ENST00000558544 TBX3O15119 743 aa19.71■□□□□ 0.75
TPM1-214ENST00000558544 CHMP2AO43633 222 aa19.71■□□□□ 0.75
TPM1-214ENST00000558544 PSMD10O75832 226 aa19.71■□□□□ 0.75
TPM1-214ENST00000558544 CCNE2O96020 404 aa19.71■□□□□ 0.75
TPM1-214ENST00000558544 ZSCAN22P10073 491 aaPredicted RBP19.71■□□□□ 0.75
TPM1-214ENST00000558544 COL6A1P12109 1028 aa19.71■□□□□ 0.75
TPM1-214ENST00000558544 HOXD8P13378 290 aaPredicted RBP19.71■□□□□ 0.75
TPM1-214ENST00000558544 PDIA4P13667 645 aaKnown RBP19.71■□□□□ 0.75
TPM1-214ENST00000558544 ACTR2P61160 394 aa19.71■□□□□ 0.75
TPM1-214ENST00000558544 ORC2Q13416 577 aaPredicted RBP19.71■□□□□ 0.75
TPM1-214ENST00000558544 FAM173BQ6P4H8 233 aa19.71■□□□□ 0.75
TPM1-214ENST00000558544 FAM20AQ96MK3 541 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms