RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 HNRNPLLQ8WVV9 542 aaKnown RBP8.06□□□□□ -1.12
VPS13C-206ENST00000558338 DDX12PQ92771 950 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 JAKMIP2Q96AA8 810 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 CEP63Q96MT8 703 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 MBOAT7Q96N66 472 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 SEMA6BQ9H3T3 888 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 SLC39A2Q9NP94 309 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 MYO6Q9UM54 1294 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 PCDHA12Q9UN75 941 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 USTQ9Y2C2 406 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 PITPNM2Q9BZ72 1349 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 ATRNL1Q5VV63 1379 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 USP17L10C9JJH3 530 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 RNF225M0QZC1 329 aaPredicted RBP8.06□□□□□ -1.12
VPS13C-206ENST00000558338 PPP1R11O60927 126 aaPredicted RBP8.06□□□□□ -1.12
VPS13C-206ENST00000558338 ENTPD3O75355 529 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 PPP1R37O75864 691 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 CLSTN1O94985 981 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 IDEP14735 1019 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 VAV2P52735 878 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 ICA1Q05084 483 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 COASYQ13057 564 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 CDC37Q16543 378 aaPredicted RBP8.06□□□□□ -1.12
VPS13C-206ENST00000558338 QRICH1Q2TAL8 776 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 FAM26FQ5R3K3 315 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 CCDC122Q5T0U0 273 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 TTBK2Q6IQ55 1244 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 WDR59Q6PJI9 974 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 KCTD1Q719H9 257 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 MSL3Q8N5Y2 521 aaKnown RBP8.06□□□□□ -1.12
VPS13C-206ENST00000558338 SUPT20HQ8NEM7 779 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 MRRFQ96E11 262 aaKnown RBP8.06□□□□□ -1.12
VPS13C-206ENST00000558338 GMCL1Q96IK5 515 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 CHP1Q99653 195 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 AMNQ9BXJ7 453 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 PARD6BQ9BYG5 372 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 ANO3Q9BYT9 981 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 IRX2Q9BZI1 471 aaPredicted RBP8.06□□□□□ -1.12
VPS13C-206ENST00000558338 NDST4Q9H3R1 872 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 NHEJ1Q9H9Q4 299 aaPredicted RBP8.06□□□□□ -1.12
VPS13C-206ENST00000558338 PRDM10Q9NQV6 1147 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 RAB21Q9UL25 225 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 BOLA1Q9Y3E2 137 aa8.06□□□□□ -1.12
VPS13C-206ENST00000558338 EIF3JO75822 258 aaKnown RBP8.05□□□□□ -1.12
VPS13C-206ENST00000558338 MMP10P09238 476 aa8.05□□□□□ -1.12
VPS13C-206ENST00000558338 EEF2P13639 858 aaKnown RBP8.05□□□□□ -1.12
VPS13C-206ENST00000558338 PTGER2P43116 358 aa8.05□□□□□ -1.12
VPS13C-206ENST00000558338 HERVK_113P62684 666 aa8.05□□□□□ -1.12
VPS13C-206ENST00000558338 FKBP3Q00688 224 aaKnown RBP8.05□□□□□ -1.12
VPS13C-206ENST00000558338 AMPD2Q01433 879 aa8.05□□□□□ -1.12
VPS13C-206ENST00000558338 KIF5AQ12840 1032 aa8.05□□□□□ -1.12
VPS13C-206ENST00000558338 TATDN1Q6P1N9 297 aa8.05□□□□□ -1.12
VPS13C-206ENST00000558338 DYMQ7RTS9 669 aa8.05□□□□□ -1.12
VPS13C-206ENST00000558338 COL23A1Q86Y22 540 aaPredicted RBP8.05□□□□□ -1.12
VPS13C-206ENST00000558338 CLEC10AQ8IUN9 316 aa8.05□□□□□ -1.12
VPS13C-206ENST00000558338 NEK11Q8NG66 645 aa8.05□□□□□ -1.12
VPS13C-206ENST00000558338 HAS1Q92839 578 aa8.05□□□□□ -1.12
VPS13C-206ENST00000558338 ZNF622Q969S3 477 aaKnown RBP eCLIP8.05□□□□□ -1.12
VPS13C-206ENST00000558338 CCDC42Q96M95 316 aa8.05□□□□□ -1.12
VPS13C-206ENST00000558338 KCNMB3Q9NPA1 279 aa8.05□□□□□ -1.12
VPS13C-206ENST00000558338 LUC7LQ9NQ29 371 aaKnown RBP8.05□□□□□ -1.12
VPS13C-206ENST00000558338 PANK4Q9NVE7 773 aa8.05□□□□□ -1.12
VPS13C-206ENST00000558338 GUCA1BQ9UMX6 200 aa8.05□□□□□ -1.12
VPS13C-206ENST00000558338 REXO2Q9Y3B8 237 aaKnown RBP8.05□□□□□ -1.12
VPS13C-206ENST00000558338 PCDHA1Q9Y5I3 950 aa8.05□□□□□ -1.12
VPS13C-206ENST00000558338 COL4A3BPQ9Y5P4 624 aa8.05□□□□□ -1.12
VPS13C-206ENST00000558338 H0YIN7 160 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 EDIL3O43854 480 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 ECE2O60344 883 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 SLC16A2P36021 539 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 PSEN1P49768 467 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 RBM5P52756 815 aaKnown RBP eCLIP8.04□□□□□ -1.12
VPS13C-206ENST00000558338 MARSP56192 900 aaKnown RBP8.04□□□□□ -1.12
VPS13C-206ENST00000558338 NFIAQ12857 509 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 Q4G0T1 1027 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 GRIPAP1Q4V328 841 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 DACT2Q5SW24 774 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 PAPD7Q5XG87 772 aaKnown RBP8.04□□□□□ -1.12
VPS13C-206ENST00000558338 LRRC55Q6ZSA7 311 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 TRAPPC11Q7Z392 1133 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 C2CD5Q86YS7 1000 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 TRIM58Q8NG06 486 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 SECISBP2LQ93073 1101 aaKnown RBP8.04□□□□□ -1.12
VPS13C-206ENST00000558338 CNKSR1Q969H4 720 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 DNAJC19Q96DA6 116 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 DRC1Q96MC2 740 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 FAM20AQ96MK3 541 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 PURBQ96QR8 312 aaKnown RBP8.04□□□□□ -1.12
VPS13C-206ENST00000558338 ACBD3Q9H3P7 528 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 DEF6Q9H4E7 631 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 DNAJC18Q9H819 358 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 PUF60Q9UHX1 559 aaKnown RBP8.04□□□□□ -1.12
VPS13C-206ENST00000558338 FAM184BQ9ULE4 1060 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 PLAGL2Q9UPG8 496 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 SIK3Q9Y2K2 1263 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 SAR1BQ9Y6B6 198 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 PSME4Q14997 1843 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 ATAD5Q96QE3 1844 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 KIF13BQ9NQT8 1826 aa8.04□□□□□ -1.12
VPS13C-206ENST00000558338 A0A0U1RQJ8 604 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms