RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 NBPF20Q3BBV1 942 aa10.21□□□□□ -0.77
SPG11-207ENST00000558138 HSDL1Q3SXM5 330 aa10.21□□□□□ -0.77
SPG11-207ENST00000558138 C1orf53Q5VUE5 145 aa10.21□□□□□ -0.77
SPG11-207ENST00000558138 KRT25Q7Z3Z0 450 aa10.21□□□□□ -0.77
SPG11-207ENST00000558138 FAM177A1Q8N128 213 aaPredicted RBP10.21□□□□□ -0.77
SPG11-207ENST00000558138 TBCKQ8TEA7 893 aa10.21□□□□□ -0.77
SPG11-207ENST00000558138 C8orf76Q96K31 380 aa10.21□□□□□ -0.77
SPG11-207ENST00000558138 UIMC1Q96RL1 719 aa10.21□□□□□ -0.77
SPG11-207ENST00000558138 KIF2CQ99661 725 aa10.21□□□□□ -0.77
SPG11-207ENST00000558138 LLPHQ9BRT6 129 aaKnown RBP10.21□□□□□ -0.77
SPG11-207ENST00000558138 ZNF577Q9BSK1 485 aa10.21□□□□□ -0.77
SPG11-207ENST00000558138 SEZ6LQ9BYH1 1024 aa10.21□□□□□ -0.77
SPG11-207ENST00000558138 PPP1R12CQ9BZL4 782 aa10.21□□□□□ -0.77
SPG11-207ENST00000558138 UBE2OQ9C0C9 1292 aaKnown RBP10.21□□□□□ -0.77
SPG11-207ENST00000558138 AZI2Q9H6S1 392 aa10.21□□□□□ -0.77
SPG11-207ENST00000558138 JPH1Q9HDC5 661 aaPredicted RBP10.21□□□□□ -0.77
SPG11-207ENST00000558138 PDLIM7Q9NR12 457 aa10.21□□□□□ -0.77
SPG11-207ENST00000558138 KIF3AQ9Y496 699 aa10.21□□□□□ -0.77
SPG11-207ENST00000558138 TNRC18O15417 2968 aaPredicted RBP10.2□□□□□ -0.78
SPG11-207ENST00000558138 LGALS2P05162 132 aa10.2□□□□□ -0.78
SPG11-207ENST00000558138 SUPT20HL2P0C7V6 817 aa10.2□□□□□ -0.78
SPG11-207ENST00000558138 MAGEA10P43363 369 aaPredicted RBP10.2□□□□□ -0.78
SPG11-207ENST00000558138 GUCY1B3Q02153 619 aa10.2□□□□□ -0.78
SPG11-207ENST00000558138 INF2Q27J81 1249 aa10.2□□□□□ -0.78
SPG11-207ENST00000558138 KIAA0753Q2KHM9 967 aa10.2□□□□□ -0.78
SPG11-207ENST00000558138 LETM2Q2VYF4 491 aa10.2□□□□□ -0.78
SPG11-207ENST00000558138 PIK3AP1Q6ZUJ8 805 aa10.2□□□□□ -0.78
SPG11-207ENST00000558138 ANKRD33Q7Z3H0 272 aa10.2□□□□□ -0.78
SPG11-207ENST00000558138 DAGLBQ8NCG7 672 aa10.2□□□□□ -0.78
SPG11-207ENST00000558138 IL27Q8NEV9 243 aa10.2□□□□□ -0.78
SPG11-207ENST00000558138 CYP2W1Q8TAV3 490 aa10.2□□□□□ -0.78
SPG11-207ENST00000558138 GLG1Q92896 1179 aa10.2□□□□□ -0.78
SPG11-207ENST00000558138 TOX2Q96NM4 488 aa10.2□□□□□ -0.78
SPG11-207ENST00000558138 SENP7Q9BQF6 1050 aa10.2□□□□□ -0.78
SPG11-207ENST00000558138 PHF20Q9BVI0 1012 aa10.2□□□□□ -0.78
SPG11-207ENST00000558138 DOCK5Q9H7D0 1870 aa10.2□□□□□ -0.78
SPG11-207ENST00000558138 AGO4Q9HCK5 861 aaKnown RBP10.2□□□□□ -0.78
SPG11-207ENST00000558138 KCNH7Q9NS40 1196 aa10.2□□□□□ -0.78
SPG11-207ENST00000558138 GJB4Q9NTQ9 266 aa10.2□□□□□ -0.78
SPG11-207ENST00000558138 PCDH10Q9P2E7 1040 aa10.2□□□□□ -0.78
SPG11-207ENST00000558138 SLC9A2Q9UBY0 812 aa10.2□□□□□ -0.78
SPG11-207ENST00000558138 SAMM50Q9Y512 469 aa10.2□□□□□ -0.78
SPG11-207ENST00000558138 MKI67P46013 3256 aaKnown RBP10.2□□□□□ -0.78
SPG11-207ENST00000558138 BACH1O14867 736 aa10.19□□□□□ -0.78
SPG11-207ENST00000558138 ADAMTS3O15072 1205 aa10.19□□□□□ -0.78
SPG11-207ENST00000558138 B4GALT4O60513 344 aa10.19□□□□□ -0.78
SPG11-207ENST00000558138 ATP9AO75110 1047 aa10.19□□□□□ -0.78
SPG11-207ENST00000558138 PPFIA4O75335 1185 aa10.19□□□□□ -0.78
SPG11-207ENST00000558138 CYP3A4P08684 503 aa10.19□□□□□ -0.78
SPG11-207ENST00000558138 ARP10275 920 aa10.19□□□□□ -0.78
SPG11-207ENST00000558138 KCNA2P16389 499 aa10.19□□□□□ -0.78
SPG11-207ENST00000558138 MARK3P27448 753 aa10.19□□□□□ -0.78
SPG11-207ENST00000558138 TCF7P36402 384 aaPredicted RBP10.19□□□□□ -0.78
SPG11-207ENST00000558138 FAAP100Q0VG06 881 aa10.19□□□□□ -0.78
SPG11-207ENST00000558138 PTGISQ16647 500 aa10.19□□□□□ -0.78
SPG11-207ENST00000558138 NFRKBQ6P4R8 1299 aa10.19□□□□□ -0.78
SPG11-207ENST00000558138 NIPA1Q7RTP0 329 aa10.19□□□□□ -0.78
SPG11-207ENST00000558138 SH3RF1Q7Z6J0 888 aa10.19□□□□□ -0.78
SPG11-207ENST00000558138 FAM126BQ8IXS8 530 aa10.19□□□□□ -0.78
SPG11-207ENST00000558138 CCDC155Q8N6L0 562 aa10.19□□□□□ -0.78
SPG11-207ENST00000558138 SEPT1Q8WYJ6 367 aa10.19□□□□□ -0.78
SPG11-207ENST00000558138 BADQ92934 168 aa10.19□□□□□ -0.78
SPG11-207ENST00000558138 GPR20Q99678 358 aa10.19□□□□□ -0.78
SPG11-207ENST00000558138 TRPV6Q9H1D0 765 aa10.19□□□□□ -0.78
SPG11-207ENST00000558138 HIPK3Q9H422 1215 aa10.19□□□□□ -0.78
SPG11-207ENST00000558138 TRMT13Q9NUP7 481 aaKnown RBP10.19□□□□□ -0.78
SPG11-207ENST00000558138 C17orf102A2RUQ5 167 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 TRIM43BA6NCK2 446 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 FAM86B1E9PN63 330 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 H3BRB1 525 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 IPO5O00410 1097 aaKnown RBP10.18□□□□□ -0.78
SPG11-207ENST00000558138 CHMP2AO43633 222 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 CCNT1O60563 726 aaKnown RBP10.18□□□□□ -0.78
SPG11-207ENST00000558138 GAS7O60861 476 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 F2P00734 622 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 FAM86B2P0C5J1 330 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 CYP2C9P11712 490 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 FDPSP14324 419 aaKnown RBP10.18□□□□□ -0.78
SPG11-207ENST00000558138 CDK7P50613 346 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 USP11P51784 963 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 FPGSQ05932 587 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 PTPN11Q06124 597 aaPredicted RBP10.18□□□□□ -0.78
SPG11-207ENST00000558138 KRT40Q6A162 431 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 MIS18BP1Q6P0N0 1132 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 NEK8Q86SG6 692 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 TRIM50Q86XT4 487 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 DIS3L2Q8IYB7 885 aaKnown RBP10.18□□□□□ -0.78
SPG11-207ENST00000558138 TMEM199Q8N511 208 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 RETREG2Q8NC44 543 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 TRIM43Q96BQ3 446 aaPredicted RBP10.18□□□□□ -0.78
SPG11-207ENST00000558138 TMX3Q96JJ7 454 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 NAP1L4Q99733 375 aaKnown RBP10.18□□□□□ -0.78
SPG11-207ENST00000558138 TUT1Q9H6E5 874 aaKnown RBP10.18□□□□□ -0.78
SPG11-207ENST00000558138 BCAS3Q9H6U6 928 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 HDAC6Q9UBN7 1215 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 DDX25Q9UHL0 483 aaKnown RBP10.18□□□□□ -0.78
SPG11-207ENST00000558138 SMC3Q9UQE7 1217 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 TRPC6Q9Y210 931 aa10.18□□□□□ -0.78
SPG11-207ENST00000558138 COLQQ9Y215 455 aaPredicted RBP10.18□□□□□ -0.78
SPG11-207ENST00000558138 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms