RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 FTOQ9C0B1 505 aaKnown RBP eCLIP13.98□□□□□ -0.17
TPM1-209ENST00000558072 LRWD1Q9UFC0 647 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 HOOK1Q9UJC3 728 aaKnown RBP13.98□□□□□ -0.17
TPM1-209ENST00000558072 TRIM17Q9Y577 477 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 KDM3AQ9Y4C1 1321 aa13.97□□□□□ -0.17
TPM1-209ENST00000558072 SPATA31C2B4DYI2 1134 aa13.97□□□□□ -0.17
TPM1-209ENST00000558072 NKRFO15226 690 aaKnown RBP eCLIP13.97□□□□□ -0.17
TPM1-209ENST00000558072 MSH4O15457 936 aa13.97□□□□□ -0.17
TPM1-209ENST00000558072 MFSD14CQ5VZR4 134 aa13.97□□□□□ -0.17
TPM1-209ENST00000558072 KANK3Q6NY19 840 aa13.97□□□□□ -0.17
TPM1-209ENST00000558072 ARMCX2Q7L311 632 aa13.97□□□□□ -0.17
TPM1-209ENST00000558072 EEPD1Q7L9B9 569 aa13.97□□□□□ -0.17
TPM1-209ENST00000558072 IGSF22Q8N9C0 903 aa13.97□□□□□ -0.17
TPM1-209ENST00000558072 LENG9Q96B70 501 aa13.97□□□□□ -0.17
TPM1-209ENST00000558072 CCSER1Q9C0I3 900 aa13.97□□□□□ -0.17
TPM1-209ENST00000558072 NT5C3AQ9H0P0 336 aa13.97□□□□□ -0.17
TPM1-209ENST00000558072 TMEM60Q9H2L4 133 aa13.97□□□□□ -0.17
TPM1-209ENST00000558072 AGO4Q9HCK5 861 aaKnown RBP13.97□□□□□ -0.17
TPM1-209ENST00000558072 PTCH2Q9Y6C5 1203 aa13.97□□□□□ -0.17
TPM1-209ENST00000558072 MRVI1Q9Y6F6 885 aa13.97□□□□□ -0.17
TPM1-209ENST00000558072 DOCK5Q9H7D0 1870 aa13.96□□□□□ -0.17
TPM1-209ENST00000558072 FAM237AA0A1B0GTK4 181 aa13.96□□□□□ -0.17
TPM1-209ENST00000558072 SORBS3O60504 671 aa13.96□□□□□ -0.17
TPM1-209ENST00000558072 TECP42680 631 aa13.96□□□□□ -0.17
TPM1-209ENST00000558072 JAK3P52333 1124 aa13.96□□□□□ -0.17
TPM1-209ENST00000558072 FAM160A1Q05DH4 1040 aa13.96□□□□□ -0.17
TPM1-209ENST00000558072 PPP2R5CQ13362 524 aa13.96□□□□□ -0.17
TPM1-209ENST00000558072 PRAMEF19Q5SWL8 479 aa13.96□□□□□ -0.17
TPM1-209ENST00000558072 AXDND1Q5T1B0 1012 aaPredicted RBP13.96□□□□□ -0.17
TPM1-209ENST00000558072 TMEM63BQ5T3F8 832 aa13.96□□□□□ -0.17
TPM1-209ENST00000558072 RESP18Q5W5W9 173 aa13.96□□□□□ -0.17
TPM1-209ENST00000558072 IQSEC1Q6DN90 963 aa13.96□□□□□ -0.17
TPM1-209ENST00000558072 ZNF746Q6NUN9 644 aaPredicted RBP13.96□□□□□ -0.17
TPM1-209ENST00000558072 FBXO16Q8IX29 292 aaPredicted RBP13.96□□□□□ -0.17
TPM1-209ENST00000558072 SMAP1Q8IYB5 467 aaPredicted RBP13.96□□□□□ -0.17
TPM1-209ENST00000558072 RASSF8Q8NHQ8 419 aa13.96□□□□□ -0.17
TPM1-209ENST00000558072 TRIB2Q92519 343 aa13.96□□□□□ -0.17
TPM1-209ENST00000558072 HAS1Q92839 578 aa13.96□□□□□ -0.17
TPM1-209ENST00000558072 CDK5RAP3Q96JB5 506 aa13.96□□□□□ -0.17
TPM1-209ENST00000558072 CSRNP2Q9H175 543 aa13.96□□□□□ -0.17
TPM1-209ENST00000558072 CUEDC2Q9H467 287 aa13.96□□□□□ -0.17
TPM1-209ENST00000558072 DDX19AQ9NUU7 478 aaKnown RBP13.96□□□□□ -0.17
TPM1-209ENST00000558072 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.96□□□□□ -0.17
TPM1-209ENST00000558072 SRRDQ9UH36 339 aa13.96□□□□□ -0.17
TPM1-209ENST00000558072 PCNTO95613 3336 aa13.95□□□□□ -0.18
TPM1-209ENST00000558072 KINO60870 393 aaKnown RBP13.95□□□□□ -0.18
TPM1-209ENST00000558072 PSMD10O75832 226 aa13.95□□□□□ -0.18
TPM1-209ENST00000558072 ARP10275 920 aa13.95□□□□□ -0.18
TPM1-209ENST00000558072 CYP2C19P33261 490 aa13.95□□□□□ -0.18
TPM1-209ENST00000558072 SYKP43405 635 aa13.95□□□□□ -0.18
TPM1-209ENST00000558072 CTCFP49711 727 aaPredicted RBP13.95□□□□□ -0.18
TPM1-209ENST00000558072 KLHL40Q2TBA0 621 aa13.95□□□□□ -0.18
TPM1-209ENST00000558072 FSIP1Q8NA03 581 aa13.95□□□□□ -0.18
TPM1-209ENST00000558072 IQUBQ8NA54 791 aa13.95□□□□□ -0.18
TPM1-209ENST00000558072 GJA10Q969M2 543 aa13.95□□□□□ -0.18
TPM1-209ENST00000558072 LENG1Q96BZ8 264 aaPredicted RBP13.95□□□□□ -0.18
TPM1-209ENST00000558072 TIGD1Q96MW7 591 aa13.95□□□□□ -0.18
TPM1-209ENST00000558072 LRRC27Q9C0I9 530 aa13.95□□□□□ -0.18
TPM1-209ENST00000558072 MAGEF1Q9HAY2 307 aa13.95□□□□□ -0.18
TPM1-209ENST00000558072 KCNH3Q9ULD8 1083 aa13.95□□□□□ -0.18
TPM1-209ENST00000558072 RBM47A0AV96 593 aaKnown RBP13.94□□□□□ -0.18
TPM1-209ENST00000558072 WDR64B1ANS9 1081 aa13.94□□□□□ -0.18
TPM1-209ENST00000558072 CTAGE5O15320 804 aa13.94□□□□□ -0.18
TPM1-209ENST00000558072 LETM1O95202 739 aaPredicted RBP13.94□□□□□ -0.18
TPM1-209ENST00000558072 MYCP01106 439 aaPredicted RBP13.94□□□□□ -0.18
TPM1-209ENST00000558072 ACVR2BQ13705 512 aa13.94□□□□□ -0.18
TPM1-209ENST00000558072 EPHA7Q15375 998 aa13.94□□□□□ -0.18
TPM1-209ENST00000558072 SEPT14Q6ZU15 432 aa13.94□□□□□ -0.18
TPM1-209ENST00000558072 CABP7Q86V35 215 aa13.94□□□□□ -0.18
TPM1-209ENST00000558072 ELOA2Q8IYF1 753 aaPredicted RBP13.94□□□□□ -0.18
TPM1-209ENST00000558072 CYP2W1Q8TAV3 490 aa13.94□□□□□ -0.18
TPM1-209ENST00000558072 PXYLP1Q8TE99 480 aa13.94□□□□□ -0.18
TPM1-209ENST00000558072 JPH1Q9HDC5 661 aaPredicted RBP13.94□□□□□ -0.18
TPM1-209ENST00000558072 TUFT1Q9NNX1 390 aa13.94□□□□□ -0.18
TPM1-209ENST00000558072 PKD2L1Q9P0L9 805 aa13.94□□□□□ -0.18
TPM1-209ENST00000558072 SNAI1O95863 264 aaPredicted RBP13.93□□□□□ -0.18
TPM1-209ENST00000558072 AMPD3Q01432 767 aa13.93□□□□□ -0.18
TPM1-209ENST00000558072 LAMC2Q13753 1193 aa13.93□□□□□ -0.18
TPM1-209ENST00000558072 BRDTQ58F21 947 aaPredicted RBP13.93□□□□□ -0.18
TPM1-209ENST00000558072 GJC2Q5T442 439 aaPredicted RBP13.93□□□□□ -0.18
TPM1-209ENST00000558072 SHC4Q6S5L8 630 aa13.93□□□□□ -0.18
TPM1-209ENST00000558072 METTL7BQ6UX53 244 aa13.93□□□□□ -0.18
TPM1-209ENST00000558072 MIER3Q7Z3K6 550 aa13.93□□□□□ -0.18
TPM1-209ENST00000558072 CEP57L1Q8IYX8 460 aa13.93□□□□□ -0.18
TPM1-209ENST00000558072 TRPV1Q8NER1 839 aa13.93□□□□□ -0.18
TPM1-209ENST00000558072 RAET1EQ8TD07 263 aa13.93□□□□□ -0.18
TPM1-209ENST00000558072 SNX29Q8TEQ0 813 aa13.93□□□□□ -0.18
TPM1-209ENST00000558072 SH3TC2Q8TF17 1288 aa13.93□□□□□ -0.18
TPM1-209ENST00000558072 SYMPKQ92797 1274 aaKnown RBP13.93□□□□□ -0.18
TPM1-209ENST00000558072 CLIC6Q96NY7 704 aa13.93□□□□□ -0.18
TPM1-209ENST00000558072 POLR3CQ9BUI4 534 aaPredicted RBP13.93□□□□□ -0.18
TPM1-209ENST00000558072 MLXIPQ9HAP2 919 aa13.93□□□□□ -0.18
TPM1-209ENST00000558072 PDGFCQ9NRA1 345 aa13.93□□□□□ -0.18
TPM1-209ENST00000558072 SLC9A2Q9UBY0 812 aa13.93□□□□□ -0.18
TPM1-209ENST00000558072 STK17AQ9UEE5 414 aa13.93□□□□□ -0.18
TPM1-209ENST00000558072 Q9Y3F1 56 aa13.93□□□□□ -0.18
TPM1-209ENST00000558072 KIAA1217Q5T5P2 1943 aa13.93□□□□□ -0.18
TPM1-209ENST00000558072 ADCY6O43306 1168 aa13.92□□□□□ -0.18
TPM1-209ENST00000558072 TRAK2O60296 914 aa13.92□□□□□ -0.18
TPM1-209ENST00000558072 RGS20O76081 388 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms