RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 PHOSPHO1Q8TCT1 267 aa4.6□□□□□ -1.67
GPHN-216ENST00000557678 DVL3Q92997 716 aaPredicted RBP4.6□□□□□ -1.67
GPHN-216ENST00000557678 KCNJ15Q99712 375 aa4.6□□□□□ -1.67
GPHN-216ENST00000557678 PHF20Q9BVI0 1012 aa4.6□□□□□ -1.67
GPHN-216ENST00000557678 EPN3Q9H201 632 aa4.6□□□□□ -1.67
GPHN-216ENST00000557678 DEF6Q9H4E7 631 aa4.6□□□□□ -1.67
GPHN-216ENST00000557678 BARX1Q9HBU1 254 aaPredicted RBP4.6□□□□□ -1.67
GPHN-216ENST00000557678 RBPJLQ9UBG7 517 aa4.6□□□□□ -1.67
GPHN-216ENST00000557678 A0A1W2PQU0 124 aa4.59□□□□□ -1.67
GPHN-216ENST00000557678 FBXO21O94952 628 aa4.59□□□□□ -1.67
GPHN-216ENST00000557678 FSHBP01225 129 aa4.59□□□□□ -1.67
GPHN-216ENST00000557678 LRG1P02750 347 aa4.59□□□□□ -1.67
GPHN-216ENST00000557678 TCF3P15923 654 aa4.59□□□□□ -1.67
GPHN-216ENST00000557678 HSP90AA2PQ14568 343 aaPredicted RBP4.59□□□□□ -1.67
GPHN-216ENST00000557678 SLC35F1Q5T1Q4 408 aa4.59□□□□□ -1.67
GPHN-216ENST00000557678 CIR1Q86X95 450 aaPredicted RBP4.59□□□□□ -1.67
GPHN-216ENST00000557678 TTC9BQ8N6N2 239 aa4.59□□□□□ -1.67
GPHN-216ENST00000557678 SH3RF3Q8TEJ3 882 aaPredicted RBP4.59□□□□□ -1.67
GPHN-216ENST00000557678 YTHDC1Q96MU7 727 aaKnown RBP4.59□□□□□ -1.67
GPHN-216ENST00000557678 PPARGC1AQ9UBK2 798 aaKnown RBP4.59□□□□□ -1.67
GPHN-216ENST00000557678 ASH2LQ9UBL3 628 aa4.59□□□□□ -1.67
GPHN-216ENST00000557678 MATN3O15232 486 aa4.58□□□□□ -1.68
GPHN-216ENST00000557678 PRODHO43272 600 aa4.58□□□□□ -1.68
GPHN-216ENST00000557678 MSCO60682 206 aa4.58□□□□□ -1.68
GPHN-216ENST00000557678 GNAT1P11488 350 aa4.58□□□□□ -1.68
GPHN-216ENST00000557678 COL6A2P12110 1019 aa4.58□□□□□ -1.68
GPHN-216ENST00000557678 GLRBP48167 497 aa4.58□□□□□ -1.68
GPHN-216ENST00000557678 PPP2CBP62714 309 aa4.58□□□□□ -1.68
GPHN-216ENST00000557678 PPP2CAP67775 309 aa4.58□□□□□ -1.68
GPHN-216ENST00000557678 MAP4K2Q12851 820 aa4.58□□□□□ -1.68
GPHN-216ENST00000557678 TESK1Q15569 626 aa4.58□□□□□ -1.68
GPHN-216ENST00000557678 ZNF585AQ6P3V2 769 aa4.58□□□□□ -1.68
GPHN-216ENST00000557678 ANKS3Q6ZW76 656 aa4.58□□□□□ -1.68
GPHN-216ENST00000557678 KLHL36Q8N4N3 616 aa4.58□□□□□ -1.68
GPHN-216ENST00000557678 IGDCC4Q8TDY8 1250 aa4.58□□□□□ -1.68
GPHN-216ENST00000557678 ZCCHC14Q8WYQ9 949 aaKnown RBP4.58□□□□□ -1.68
GPHN-216ENST00000557678 C1orf159Q96HA4 380 aa4.58□□□□□ -1.68
GPHN-216ENST00000557678 SLC6A20Q9NP91 592 aa4.58□□□□□ -1.68
GPHN-216ENST00000557678 GPR27Q9NS67 375 aa4.58□□□□□ -1.68
GPHN-216ENST00000557678 PPP4R1LQ9P1A2 415 aa4.58□□□□□ -1.68
GPHN-216ENST00000557678 SRRDQ9UH36 339 aa4.58□□□□□ -1.68
GPHN-216ENST00000557678 NUB1Q9Y5A7 615 aa4.58□□□□□ -1.68
GPHN-216ENST00000557678 IQCA1LA6NCM1 817 aa4.57□□□□□ -1.68
GPHN-216ENST00000557678 DLX3O60479 287 aa4.57□□□□□ -1.68
GPHN-216ENST00000557678 FGRP09769 529 aa4.57□□□□□ -1.68
GPHN-216ENST00000557678 TNFRSF1AP19438 455 aa4.57□□□□□ -1.68
GPHN-216ENST00000557678 SPIRE1Q08AE8 756 aa4.57□□□□□ -1.68
GPHN-216ENST00000557678 NFATC3Q12968 1075 aa4.57□□□□□ -1.68
GPHN-216ENST00000557678 TUSC3Q13454 348 aa4.57□□□□□ -1.68
GPHN-216ENST00000557678 ICAM4Q14773 271 aa4.57□□□□□ -1.68
GPHN-216ENST00000557678 SPRED1Q7Z699 444 aa4.57□□□□□ -1.68
GPHN-216ENST00000557678 PALM2Q8IXS6 379 aa4.57□□□□□ -1.68
GPHN-216ENST00000557678 CELF2-AS1Q8N7Q2 184 aa4.57□□□□□ -1.68
GPHN-216ENST00000557678 AARSD1Q9BTE6 412 aaKnown RBP4.57□□□□□ -1.68
GPHN-216ENST00000557678 NPFFR2Q9Y5X5 522 aa4.57□□□□□ -1.68
GPHN-216ENST00000557678 BLACEA4D250 179 aa4.56□□□□□ -1.68
GPHN-216ENST00000557678 LTFP02788 710 aa4.56□□□□□ -1.68
GPHN-216ENST00000557678 CKMP06732 381 aa4.56□□□□□ -1.68
GPHN-216ENST00000557678 GRK2P25098 689 aa4.56□□□□□ -1.68
GPHN-216ENST00000557678 GRK3P35626 688 aa4.56□□□□□ -1.68
GPHN-216ENST00000557678 IFRD2Q12894 506 aaPredicted RBP4.56□□□□□ -1.68
GPHN-216ENST00000557678 DDR2Q16832 855 aa4.56□□□□□ -1.68
GPHN-216ENST00000557678 KIZQ2M2Z5 673 aa4.56□□□□□ -1.68
GPHN-216ENST00000557678 CYP4F22Q6NT55 531 aa4.56□□□□□ -1.68
GPHN-216ENST00000557678 KCNT2Q6UVM3 1135 aa4.56□□□□□ -1.68
GPHN-216ENST00000557678 NSMFQ6X4W1 530 aa4.56□□□□□ -1.68
GPHN-216ENST00000557678 OTOP3Q7RTS5 596 aa4.56□□□□□ -1.68
GPHN-216ENST00000557678 RALYLQ86SE5 291 aaKnown RBP4.56□□□□□ -1.68
GPHN-216ENST00000557678 MCF2L2Q86YR7 1114 aa4.56□□□□□ -1.68
GPHN-216ENST00000557678 DCAF4Q8WV16 495 aa4.56□□□□□ -1.68
GPHN-216ENST00000557678 CLEC4DQ8WXI8 215 aa4.56□□□□□ -1.68
GPHN-216ENST00000557678 CDK5RAP1Q96SZ6 601 aaKnown RBP4.56□□□□□ -1.68
GPHN-216ENST00000557678 TRIM55Q9BYV6 548 aa4.56□□□□□ -1.68
GPHN-216ENST00000557678 KLC2Q9H0B6 622 aa4.56□□□□□ -1.68
GPHN-216ENST00000557678 DLL4Q9NR61 685 aa4.56□□□□□ -1.68
GPHN-216ENST00000557678 ARHGAP20Q9P2F6 1191 aa4.56□□□□□ -1.68
GPHN-216ENST00000557678 PPP1R1BQ9UD71 204 aaPredicted RBP4.56□□□□□ -1.68
GPHN-216ENST00000557678 WASF3Q9UPY6 502 aa4.56□□□□□ -1.68
GPHN-216ENST00000557678 AKAP8O43823 692 aaKnown RBP4.55□□□□□ -1.68
GPHN-216ENST00000557678 C6P13671 934 aa4.55□□□□□ -1.68
GPHN-216ENST00000557678 SMAD2Q15796 467 aaKnown RBP4.55□□□□□ -1.68
GPHN-216ENST00000557678 SKIDA1Q1XH10 827 aa4.55□□□□□ -1.68
GPHN-216ENST00000557678 PAN2Q504Q3 1202 aaKnown RBP4.55□□□□□ -1.68
GPHN-216ENST00000557678 RSPO2Q6UXX9 243 aaPredicted RBP4.55□□□□□ -1.68
GPHN-216ENST00000557678 EP400NLQ6ZTU2 488 aa4.55□□□□□ -1.68
GPHN-216ENST00000557678 GPR155Q7Z3F1 870 aa4.55□□□□□ -1.68
GPHN-216ENST00000557678 IFNL3Q8IZI9 196 aa4.55□□□□□ -1.68
GPHN-216ENST00000557678 STPG3Q8N7X2 389 aa4.55□□□□□ -1.68
GPHN-216ENST00000557678 SLC16A11Q8NCK7 471 aa4.55□□□□□ -1.68
GPHN-216ENST00000557678 NUDT10Q8NFP7 164 aa4.55□□□□□ -1.68
GPHN-216ENST00000557678 MBD6Q96DN6 1003 aa4.55□□□□□ -1.68
GPHN-216ENST00000557678 NUDT11Q96G61 164 aa4.55□□□□□ -1.68
GPHN-216ENST00000557678 PTPN18Q99952 460 aa4.55□□□□□ -1.68
GPHN-216ENST00000557678 TINF2Q9BSI4 451 aa4.55□□□□□ -1.68
GPHN-216ENST00000557678 SSBP3Q9BWW4 388 aaPredicted RBP4.55□□□□□ -1.68
GPHN-216ENST00000557678 C1QTNF3Q9BXJ4 246 aa4.55□□□□□ -1.68
GPHN-216ENST00000557678 KRTAP3-1Q9BYR8 98 aa4.55□□□□□ -1.68
GPHN-216ENST00000557678 ZFP69BQ9UJL9 534 aa4.55□□□□□ -1.68
GPHN-216ENST00000557678 DSEQ9UL01 958 aa4.55□□□□□ -1.68
GPHN-216ENST00000557678 TCAF1Q9Y4C2 921 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms