RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 A0A1W2PQY0 241 aa16.86■□□□□ 0.29
VIPAS39-210ENST00000557466 MOXD2PA6NHM9 499 aa16.86■□□□□ 0.29
VIPAS39-210ENST00000557466 A6NJR5 290 aa16.86■□□□□ 0.29
VIPAS39-210ENST00000557466 WNT7AO00755 349 aa16.86■□□□□ 0.29
VIPAS39-210ENST00000557466 SLC37A4O43826 429 aa16.86■□□□□ 0.29
VIPAS39-210ENST00000557466 CYP3A7P24462 503 aa16.86■□□□□ 0.29
VIPAS39-210ENST00000557466 HSDL1Q3SXM5 330 aa16.86■□□□□ 0.29
VIPAS39-210ENST00000557466 CXCL17Q6UXB2 119 aa16.86■□□□□ 0.29
VIPAS39-210ENST00000557466 NOSTRINQ8IVI9 506 aa16.86■□□□□ 0.29
VIPAS39-210ENST00000557466 GIMAP8Q8ND71 665 aaPredicted RBP16.86■□□□□ 0.29
VIPAS39-210ENST00000557466 PPTC7Q8NI37 304 aa16.86■□□□□ 0.29
VIPAS39-210ENST00000557466 FERMT2Q96AC1 680 aa16.86■□□□□ 0.29
VIPAS39-210ENST00000557466 SPATA33Q96N06 139 aa16.86■□□□□ 0.29
VIPAS39-210ENST00000557466 SENP6Q9GZR1 1112 aaPredicted RBP16.86■□□□□ 0.29
VIPAS39-210ENST00000557466 MLXIPQ9HAP2 919 aa16.86■□□□□ 0.29
VIPAS39-210ENST00000557466 TNRC18O15417 2968 aaPredicted RBP16.85■□□□□ 0.29
VIPAS39-210ENST00000557466 ZEB2O60315 1214 aa16.85■□□□□ 0.29
VIPAS39-210ENST00000557466 HSP90AA1P07900 732 aaKnown RBP16.85■□□□□ 0.29
VIPAS39-210ENST00000557466 MYL3P08590 195 aa16.85■□□□□ 0.29
VIPAS39-210ENST00000557466 GCFC2P16383 781 aaKnown RBP16.85■□□□□ 0.29
VIPAS39-210ENST00000557466 U2AF2P26368 475 aaKnown RBP eCLIP16.85■□□□□ 0.29
VIPAS39-210ENST00000557466 RGS19P49795 217 aa16.85■□□□□ 0.29
VIPAS39-210ENST00000557466 SP4Q02446 784 aa16.85■□□□□ 0.29
VIPAS39-210ENST00000557466 Q4G0T1 1027 aa16.85■□□□□ 0.29
VIPAS39-210ENST00000557466 MCTP1Q6DN14 999 aa16.85■□□□□ 0.29
VIPAS39-210ENST00000557466 ZNF577Q9BSK1 485 aa16.85■□□□□ 0.29
VIPAS39-210ENST00000557466 POLR3EQ9NVU0 708 aa16.85■□□□□ 0.29
VIPAS39-210ENST00000557466 DDX25Q9UHL0 483 aaKnown RBP16.85■□□□□ 0.29
VIPAS39-210ENST00000557466 NFASCO94856 1347 aa16.85■□□□□ 0.29
VIPAS39-210ENST00000557466 VPS37CA5D8V6 355 aaPredicted RBP16.84■□□□□ 0.29
VIPAS39-210ENST00000557466 DDX39AO00148 427 aaKnown RBP16.84■□□□□ 0.29
VIPAS39-210ENST00000557466 IPO5O00410 1097 aaKnown RBP16.84■□□□□ 0.29
VIPAS39-210ENST00000557466 MSH4O15457 936 aa16.84■□□□□ 0.29
VIPAS39-210ENST00000557466 CCNT1O60563 726 aaKnown RBP16.84■□□□□ 0.29
VIPAS39-210ENST00000557466 HOXD8P13378 290 aaPredicted RBP16.84■□□□□ 0.29
VIPAS39-210ENST00000557466 PDCP20941 246 aa16.84■□□□□ 0.29
VIPAS39-210ENST00000557466 PURAQ00577 322 aaKnown RBP16.84■□□□□ 0.29
VIPAS39-210ENST00000557466 BRDTQ58F21 947 aaPredicted RBP16.84■□□□□ 0.29
VIPAS39-210ENST00000557466 PPP4R3AQ6IN85 833 aa16.84■□□□□ 0.29
VIPAS39-210ENST00000557466 SPRYD3Q8NCJ5 442 aa16.84■□□□□ 0.29
VIPAS39-210ENST00000557466 SDF4Q9BRK5 362 aa16.84■□□□□ 0.29
VIPAS39-210ENST00000557466 JPH1Q9HDC5 661 aaPredicted RBP16.84■□□□□ 0.29
VIPAS39-210ENST00000557466 NOP56O00567 594 aaKnown RBP16.83■□□□□ 0.28
VIPAS39-210ENST00000557466 DHX15O43143 795 aaKnown RBP16.83■□□□□ 0.28
VIPAS39-210ENST00000557466 ZNF286BP0CG31 522 aa16.83■□□□□ 0.28
VIPAS39-210ENST00000557466 SYT1P21579 422 aa16.83■□□□□ 0.28
VIPAS39-210ENST00000557466 DGKDQ16760 1214 aa16.83■□□□□ 0.28
VIPAS39-210ENST00000557466 POTEDQ86YR6 584 aa16.83■□□□□ 0.28
VIPAS39-210ENST00000557466 ETNPPLQ8TBG4 499 aa16.83■□□□□ 0.28
VIPAS39-210ENST00000557466 SLC5A5Q92911 643 aa16.83■□□□□ 0.28
VIPAS39-210ENST00000557466 GJA10Q969M2 543 aa16.83■□□□□ 0.28
VIPAS39-210ENST00000557466 GLT1D1Q96MS3 346 aa16.83■□□□□ 0.28
VIPAS39-210ENST00000557466 GPR20Q99678 358 aa16.83■□□□□ 0.28
VIPAS39-210ENST00000557466 NAP1L4Q99733 375 aaKnown RBP16.83■□□□□ 0.28
VIPAS39-210ENST00000557466 STARD7Q9NQZ5 370 aa16.83■□□□□ 0.28
VIPAS39-210ENST00000557466 SLC9A2Q9UBY0 812 aa16.83■□□□□ 0.28
VIPAS39-210ENST00000557466 KPNA6O60684 536 aa16.82■□□□□ 0.28
VIPAS39-210ENST00000557466 ATP2B1P20020 1258 aa16.82■□□□□ 0.28
VIPAS39-210ENST00000557466 ATN1P54259 1190 aaPredicted RBP16.82■□□□□ 0.28
VIPAS39-210ENST00000557466 PSMC6P62333 389 aa16.82■□□□□ 0.28
VIPAS39-210ENST00000557466 MTG1Q9BT17 334 aaPredicted RBP16.82■□□□□ 0.28
VIPAS39-210ENST00000557466 KCNMB3Q9NPA1 279 aa16.82■□□□□ 0.28
VIPAS39-210ENST00000557466 ELP1O95163 1332 aa16.81■□□□□ 0.28
VIPAS39-210ENST00000557466 GSTTP1A0A1W2PQM5 241 aa16.81■□□□□ 0.28
VIPAS39-210ENST00000557466 CABYRO75952 493 aa16.81■□□□□ 0.28
VIPAS39-210ENST00000557466 CCNE2O96020 404 aa16.81■□□□□ 0.28
VIPAS39-210ENST00000557466 LGALS2P05162 132 aa16.81■□□□□ 0.28
VIPAS39-210ENST00000557466 TOB1P50616 345 aaPredicted RBP16.81■□□□□ 0.28
VIPAS39-210ENST00000557466 BECN1Q14457 450 aa16.81■□□□□ 0.28
VIPAS39-210ENST00000557466 NBR1Q14596 966 aa16.81■□□□□ 0.28
VIPAS39-210ENST00000557466 SNX17Q15036 470 aa16.81■□□□□ 0.28
VIPAS39-210ENST00000557466 LRRC26Q2I0M4 334 aa16.81■□□□□ 0.28
VIPAS39-210ENST00000557466 TTC38Q5R3I4 469 aa16.81■□□□□ 0.28
VIPAS39-210ENST00000557466 LRCH2Q5VUJ6 765 aa16.81■□□□□ 0.28
VIPAS39-210ENST00000557466 SLC39A5Q6ZMH5 540 aa16.81■□□□□ 0.28
VIPAS39-210ENST00000557466 TRIM50Q86XT4 487 aa16.81■□□□□ 0.28
VIPAS39-210ENST00000557466 KAT2BQ92831 832 aa16.81■□□□□ 0.28
VIPAS39-210ENST00000557466 TBC1D22BQ9NU19 505 aa16.81■□□□□ 0.28
VIPAS39-210ENST00000557466 NOL7Q9UMY1 257 aaKnown RBP16.81■□□□□ 0.28
VIPAS39-210ENST00000557466 MTMR6Q9Y217 621 aa16.81■□□□□ 0.28
VIPAS39-210ENST00000557466 MYH9P35579 1960 aaKnown RBP16.8■□□□□ 0.28
VIPAS39-210ENST00000557466 GRIN2DO15399 1336 aa16.8■□□□□ 0.28
VIPAS39-210ENST00000557466 A0A0U1RQG5 324 aaPredicted RBP16.8■□□□□ 0.28
VIPAS39-210ENST00000557466 NEMFO60524 1076 aa16.8■□□□□ 0.28
VIPAS39-210ENST00000557466 GAS7O60861 476 aa16.8■□□□□ 0.28
VIPAS39-210ENST00000557466 PPFIA4O75335 1185 aa16.8■□□□□ 0.28
VIPAS39-210ENST00000557466 PSMD10O75832 226 aa16.8■□□□□ 0.28
VIPAS39-210ENST00000557466 F2P00734 622 aa16.8■□□□□ 0.28
VIPAS39-210ENST00000557466 MCM7P33993 719 aa16.8■□□□□ 0.28
VIPAS39-210ENST00000557466 TCF7P36402 384 aaPredicted RBP16.8■□□□□ 0.28
VIPAS39-210ENST00000557466 TRAPPC10P48553 1259 aa16.8■□□□□ 0.28
VIPAS39-210ENST00000557466 ACTR2P61160 394 aa16.8■□□□□ 0.28
VIPAS39-210ENST00000557466 UTP14CQ5TAP6 766 aaKnown RBP16.8■□□□□ 0.28
VIPAS39-210ENST00000557466 FERMT3Q86UX7 667 aa16.8■□□□□ 0.28
VIPAS39-210ENST00000557466 PPP1R13LQ8WUF5 828 aa16.8■□□□□ 0.28
VIPAS39-210ENST00000557466 HAS1Q92839 578 aa16.8■□□□□ 0.28
VIPAS39-210ENST00000557466 VTI1AQ96AJ9 217 aa16.8■□□□□ 0.28
VIPAS39-210ENST00000557466 RIT2Q99578 217 aa16.8■□□□□ 0.28
VIPAS39-210ENST00000557466 C16orf70Q9BSU1 422 aa16.8■□□□□ 0.28
VIPAS39-210ENST00000557466 HTATIP2Q9BUP3 242 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms