RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 KRIT1O00522 736 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 SLC26A4O43511 780 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 ECE2O60344 883 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 IFNA8P32881 189 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 BSPRYQ5W0U4 402 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 SH3TC2Q8TF17 1288 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 FAM149B1Q96BN6 582 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 H7C0C1 242 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 ATP5OP48047 213 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 MAPK6Q16659 721 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 KCTD1Q719H9 257 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 SPATS2Q86XZ4 545 aaKnown RBP9.06□□□□□ -0.96
CHD8-213ENST00000557364 SYNE4Q8N205 404 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 SERTAD1Q9UHV2 236 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 KDM6AO15550 1401 aaPredicted RBP9.06□□□□□ -0.96
CHD8-213ENST00000557364 CPSF1Q10570 1443 aaKnown RBP9.06□□□□□ -0.96
CHD8-213ENST00000557364 PFKFB1P16118 471 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 RPS12P25398 132 aaKnown RBP9.06□□□□□ -0.96
CHD8-213ENST00000557364 VPS72Q15906 364 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 KLC3Q6P597 504 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 MB21D1Q8N884 522 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 RSRC1Q96IZ7 334 aaKnown RBP9.06□□□□□ -0.96
CHD8-213ENST00000557364 WRNIP1Q96S55 665 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 TIPINQ9BVW5 301 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 MAGEB5Q9BZ81 275 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 OSBPL3Q9H4L5 887 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 STRIP2Q9ULQ0 834 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 C19orf81C9J6K1 198 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 C21orf2O43822 256 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 LRMPQ12912 555 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 DNAJC24Q6P3W2 148 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 CERKQ8TCT0 537 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 PSPC1Q8WXF1 523 aaKnown RBP9.06□□□□□ -0.96
CHD8-213ENST00000557364 FAM20AQ96MK3 541 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 RILPQ96NA2 401 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 MMP19Q99542 508 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 SEL1LQ9UBV2 794 aa9.06□□□□□ -0.96
CHD8-213ENST00000557364 IFNAR1P17181 557 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 EPHB1P54762 984 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 LPAR1Q92633 364 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 PALD1Q9ULE6 856 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 PLA2R1Q13018 1463 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 KIAA0391O15091 583 aaKnown RBP9.05□□□□□ -0.96
CHD8-213ENST00000557364 CDK8P49336 464 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 PPP2R5CQ13362 524 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 TAF11Q15544 211 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 MAN2A1Q16706 1144 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 VSIG1Q86XK7 387 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 CCDC170Q8IYT3 715 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 GANCQ8TET4 914 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 GPKOWQ92917 476 aaPredicted RBP eCLIP9.05□□□□□ -0.96
CHD8-213ENST00000557364 SCYL1Q96KG9 808 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 PIDD1Q9HB75 910 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 UBN1Q9NPG3 1134 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 NLRC4Q9NPP4 1024 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 PCDHB8Q9UN66 801 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 TMEM247A6NEH6 219 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 PRPSAP2O60256 369 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 RAD51Q06609 339 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 APOA5Q6Q788 366 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 ZNF526Q8TF50 670 aaPredicted RBP9.05□□□□□ -0.96
CHD8-213ENST00000557364 PPP1R12CQ9BZL4 782 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 VPS18Q9P253 973 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.05□□□□□ -0.96
CHD8-213ENST00000557364 A0A0D9SFI3 127 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 STK25O00506 426 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 TOGARAM2Q6ZUX3 1019 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 ACAP3Q96P50 834 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 ACAD9Q9H845 621 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 ZFYVE28Q9HCC9 887 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 ZHX2Q9Y6X8 837 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 USP17L15C9J2P7 530 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 USP17L13C9JLJ4 530 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 USP17L11C9JVI0 530 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 USP17L18D6R9N7 530 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 USP17L22D6RA61 530 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 USP17L17D6RBQ6 530 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 USP17L19D6RCP7 530 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 USP17L20D6RJB6 530 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 HUS1O60921 280 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 ATP2C2O75185 946 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 IRX5P78411 483 aaPredicted RBP9.05□□□□□ -0.96
CHD8-213ENST00000557364 CCDC15Q0P6D6 951 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 USP17L24Q0WX57 530 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 SFSWAPQ12872 951 aaKnown RBP9.05□□□□□ -0.96
CHD8-213ENST00000557364 LMNTD2Q8IXW0 634 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 SPDYE1Q8NFV5 336 aaPredicted RBP9.05□□□□□ -0.96
CHD8-213ENST00000557364 MAP4K1Q92918 833 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 CCDC124Q96CT7 223 aaKnown RBP9.05□□□□□ -0.96
CHD8-213ENST00000557364 IRAK4Q9NWZ3 460 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 RSPH14Q9UHP6 348 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 GDF11O95390 407 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 Q9H521 79 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 ZNF148Q9UQR1 794 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 TBXAS1P24557 533 aaPredicted RBP9.05□□□□□ -0.96
CHD8-213ENST00000557364 MTMR1Q13613 665 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 SYMPKQ92797 1274 aaKnown RBP9.05□□□□□ -0.96
CHD8-213ENST00000557364 CRAMP1Q96RY5 1269 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 RMDN3Q96TC7 470 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 BLZF1Q9H2G9 400 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms