RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 C5orf67F2Z3F1 127 aa11.86□□□□□ -0.51
RDH11-210ENST00000557331 ZBTB5O15062 677 aa11.86□□□□□ -0.51
RDH11-210ENST00000557331 GGPS1O95749 300 aa11.86□□□□□ -0.51
RDH11-210ENST00000557331 MRE11P49959 708 aa11.86□□□□□ -0.51
RDH11-210ENST00000557331 ZP2Q05996 745 aa11.86□□□□□ -0.51
RDH11-210ENST00000557331 HSDL1Q3SXM5 330 aa11.86□□□□□ -0.51
RDH11-210ENST00000557331 NAALADL2Q58DX5 795 aa11.86□□□□□ -0.51
RDH11-210ENST00000557331 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.86□□□□□ -0.51
RDH11-210ENST00000557331 SPRED2Q7Z698 418 aa11.86□□□□□ -0.51
RDH11-210ENST00000557331 RPAINQ86UA6 219 aa11.86□□□□□ -0.51
RDH11-210ENST00000557331 RSPH3Q86UC2 560 aa11.86□□□□□ -0.51
RDH11-210ENST00000557331 FIBCD1Q8N539 461 aa11.86□□□□□ -0.51
RDH11-210ENST00000557331 GIMAP8Q8ND71 665 aaPredicted RBP11.86□□□□□ -0.51
RDH11-210ENST00000557331 C16orf70Q9BSU1 422 aa11.86□□□□□ -0.51
RDH11-210ENST00000557331 PLVAPQ9BX97 442 aa11.86□□□□□ -0.51
RDH11-210ENST00000557331 IFIH1Q9BYX4 1025 aaKnown RBP11.86□□□□□ -0.51
RDH11-210ENST00000557331 PCDHB15Q9Y5E8 787 aa11.86□□□□□ -0.51
RDH11-210ENST00000557331 PCDHA1Q9Y5I3 950 aa11.86□□□□□ -0.51
RDH11-210ENST00000557331 COL4A4P53420 1690 aaPredicted RBP11.86□□□□□ -0.51
RDH11-210ENST00000557331 MYH7BA7E2Y1 1941 aa11.86□□□□□ -0.51
RDH11-210ENST00000557331 PTPRSQ13332 1948 aa11.86□□□□□ -0.51
RDH11-210ENST00000557331 FSD2A1L4K1 749 aa11.85□□□□□ -0.51
RDH11-210ENST00000557331 GCOM1H8Y6P7 765 aaPredicted RBP11.85□□□□□ -0.51
RDH11-210ENST00000557331 KDM4AO75164 1064 aa11.85□□□□□ -0.51
RDH11-210ENST00000557331 POLR2MP0CAP2 368 aa11.85□□□□□ -0.51
RDH11-210ENST00000557331 MYCLP12524 364 aaPredicted RBP11.85□□□□□ -0.51
RDH11-210ENST00000557331 SMAD2Q15796 467 aaKnown RBP11.85□□□□□ -0.51
RDH11-210ENST00000557331 IMMTQ16891 758 aaKnown RBP11.85□□□□□ -0.51
RDH11-210ENST00000557331 TCEAL5Q5H9L2 206 aa11.85□□□□□ -0.51
RDH11-210ENST00000557331 FAM26DQ5JW98 314 aa11.85□□□□□ -0.51
RDH11-210ENST00000557331 IFIT1BQ5T764 474 aaKnown RBP11.85□□□□□ -0.51
RDH11-210ENST00000557331 TAF2Q6P1X5 1199 aa11.85□□□□□ -0.51
RDH11-210ENST00000557331 XRRA1Q6P2D8 792 aa11.85□□□□□ -0.51
RDH11-210ENST00000557331 METTL7BQ6UX53 244 aa11.85□□□□□ -0.51
RDH11-210ENST00000557331 TBC1D10CQ8IV04 446 aa11.85□□□□□ -0.51
RDH11-210ENST00000557331 ENAHQ8N8S7 591 aaPredicted RBP11.85□□□□□ -0.51
RDH11-210ENST00000557331 TNPO1Q92973 898 aaKnown RBP11.85□□□□□ -0.51
RDH11-210ENST00000557331 SENP7Q9BQF6 1050 aa11.85□□□□□ -0.51
RDH11-210ENST00000557331 IRF2BPLQ9H1B7 796 aa11.85□□□□□ -0.51
RDH11-210ENST00000557331 VAT1LQ9HCJ6 419 aa11.85□□□□□ -0.51
RDH11-210ENST00000557331 MYH6P13533 1939 aa11.85□□□□□ -0.51
RDH11-210ENST00000557331 CACNA1HO95180 2353 aa11.85□□□□□ -0.51
RDH11-210ENST00000557331 ZNF318Q5VUA4 2279 aa11.85□□□□□ -0.51
RDH11-210ENST00000557331 NRCAMQ92823 1304 aa11.85□□□□□ -0.51
RDH11-210ENST00000557331 KLRF2D3W0D1 207 aa11.84□□□□□ -0.51
RDH11-210ENST00000557331 H3BQ06 376 aaPredicted RBP11.84□□□□□ -0.51
RDH11-210ENST00000557331 RGS20O76081 388 aa11.84□□□□□ -0.51
RDH11-210ENST00000557331 SMIM10L2AP0DMW4 78 aa11.84□□□□□ -0.51
RDH11-210ENST00000557331 SMIM10L2BP0DMW5 78 aa11.84□□□□□ -0.51
RDH11-210ENST00000557331 UBA1P22314 1058 aaKnown RBP11.84□□□□□ -0.51
RDH11-210ENST00000557331 ICAM3P32942 547 aa11.84□□□□□ -0.51
RDH11-210ENST00000557331 BMPR1AP36894 532 aa11.84□□□□□ -0.51
RDH11-210ENST00000557331 ZNF200P98182 395 aaPredicted RBP11.84□□□□□ -0.51
RDH11-210ENST00000557331 NHLH1Q02575 133 aa11.84□□□□□ -0.51
RDH11-210ENST00000557331 NMIQ13287 307 aaPredicted RBP11.84□□□□□ -0.51
RDH11-210ENST00000557331 HDAC1Q13547 482 aaPredicted RBP11.84□□□□□ -0.51
RDH11-210ENST00000557331 PGM5Q15124 567 aa11.84□□□□□ -0.51
RDH11-210ENST00000557331 CTC1Q2NKJ3 1217 aa11.84□□□□□ -0.51
RDH11-210ENST00000557331 HERC4Q5GLZ8 1057 aaPredicted RBP11.84□□□□□ -0.51
RDH11-210ENST00000557331 BMP8AQ7Z5Y6 402 aa11.84□□□□□ -0.51
RDH11-210ENST00000557331 ZNF589Q86UQ0 364 aaPredicted RBP11.84□□□□□ -0.51
RDH11-210ENST00000557331 CLP1Q92989 425 aaKnown RBP11.84□□□□□ -0.51
RDH11-210ENST00000557331 MTMR8Q96EF0 704 aa11.84□□□□□ -0.51
RDH11-210ENST00000557331 ZKSCAN3Q9BRR0 538 aa11.84□□□□□ -0.51
RDH11-210ENST00000557331 DSCC1Q9BVC3 393 aa11.84□□□□□ -0.51
RDH11-210ENST00000557331 RNPEPQ9H4A4 650 aa11.84□□□□□ -0.51
RDH11-210ENST00000557331 RNF216Q9NWF9 866 aaPredicted RBP11.84□□□□□ -0.51
RDH11-210ENST00000557331 CLDND1Q9NY35 253 aa11.84□□□□□ -0.51
RDH11-210ENST00000557331 ZSWIM5Q9P217 1185 aa11.84□□□□□ -0.51
RDH11-210ENST00000557331 ZDBF2Q9HCK1 2354 aa11.84□□□□□ -0.51
RDH11-210ENST00000557331 KAT6AQ92794 2004 aa11.84□□□□□ -0.51
RDH11-210ENST00000557331 UPP2O95045 317 aa11.83□□□□□ -0.52
RDH11-210ENST00000557331 LGALS2P05162 132 aa11.83□□□□□ -0.52
RDH11-210ENST00000557331 SDSP20132 328 aa11.83□□□□□ -0.52
RDH11-210ENST00000557331 SMAD4Q13485 552 aaKnown RBP11.83□□□□□ -0.52
RDH11-210ENST00000557331 TCTN1Q2MV58 587 aa11.83□□□□□ -0.52
RDH11-210ENST00000557331 EP400NLQ6ZTU2 488 aa11.83□□□□□ -0.52
RDH11-210ENST00000557331 P2RX5Q93086 422 aa11.83□□□□□ -0.52
RDH11-210ENST00000557331 WNT8BQ93098 351 aa11.83□□□□□ -0.52
RDH11-210ENST00000557331 CDHR1Q96JP9 859 aa11.83□□□□□ -0.52
RDH11-210ENST00000557331 FBXL18Q96ME1 805 aa11.83□□□□□ -0.52
RDH11-210ENST00000557331 CPVLQ9H3G5 476 aa11.83□□□□□ -0.52
RDH11-210ENST00000557331 PTPRZ1P23471 2315 aaPredicted RBP11.83□□□□□ -0.52
RDH11-210ENST00000557331 NEDD4P46934 1319 aa11.83□□□□□ -0.52
RDH11-210ENST00000557331 B4E1Z4 1266 aa11.82□□□□□ -0.52
RDH11-210ENST00000557331 TREHO43280 583 aa11.82□□□□□ -0.52
RDH11-210ENST00000557331 FIBPO43427 364 aa11.82□□□□□ -0.52
RDH11-210ENST00000557331 CTNNB1P35222 781 aa11.82□□□□□ -0.52
RDH11-210ENST00000557331 TRDNQ13061 729 aa11.82□□□□□ -0.52
RDH11-210ENST00000557331 RILPL2Q969X0 211 aa11.82□□□□□ -0.52
RDH11-210ENST00000557331 INPP4AQ96PE3 977 aaPredicted RBP11.82□□□□□ -0.52
RDH11-210ENST00000557331 FTHL17Q9BXU8 183 aa11.82□□□□□ -0.52
RDH11-210ENST00000557331 DIAPH3Q9NSV4 1193 aa11.82□□□□□ -0.52
RDH11-210ENST00000557331 SQORQ9Y6N5 450 aa11.82□□□□□ -0.52
RDH11-210ENST00000557331 RALGAPA2Q2PPJ7 1873 aa11.81□□□□□ -0.52
RDH11-210ENST00000557331 C5orf42Q9H799 3197 aa11.81□□□□□ -0.52
RDH11-210ENST00000557331 PNMA6FA0A0J9YX94 578 aa11.81□□□□□ -0.52
RDH11-210ENST00000557331 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.81□□□□□ -0.52
RDH11-210ENST00000557331 ERICH2A1L162 156 aa11.81□□□□□ -0.52
RDH11-210ENST00000557331 PALM3A6NDB9 673 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms