RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.29□□□□□ -0.12
SNX6-209ENST00000557265 KLRF2D3W0D1 207 aa14.29□□□□□ -0.12
SNX6-209ENST00000557265 CCND2P30279 289 aa14.29□□□□□ -0.12
SNX6-209ENST00000557265 HOXC8P31273 242 aa14.29□□□□□ -0.12
SNX6-209ENST00000557265 HDAC1Q13547 482 aaPredicted RBP14.29□□□□□ -0.12
SNX6-209ENST00000557265 CWC27Q6UX04 472 aaKnown RBP14.29□□□□□ -0.12
SNX6-209ENST00000557265 PABPC5Q96DU9 382 aaKnown RBP14.29□□□□□ -0.12
SNX6-209ENST00000557265 UBAC1Q9BSL1 405 aa14.29□□□□□ -0.12
SNX6-209ENST00000557265 IFIH1Q9BYX4 1025 aaKnown RBP14.29□□□□□ -0.12
SNX6-209ENST00000557265 RNPEPQ9H4A4 650 aa14.29□□□□□ -0.12
SNX6-209ENST00000557265 NSUN3Q9H649 340 aaKnown RBP14.29□□□□□ -0.12
SNX6-209ENST00000557265 BCAS3Q9H6U6 928 aa14.29□□□□□ -0.12
SNX6-209ENST00000557265 POTEB3A0JP26 581 aa14.28□□□□□ -0.12
SNX6-209ENST00000557265 ZBTB5O15062 677 aa14.28□□□□□ -0.12
SNX6-209ENST00000557265 DCXO43602 365 aa14.28□□□□□ -0.12
SNX6-209ENST00000557265 LGALS2P05162 132 aa14.28□□□□□ -0.12
SNX6-209ENST00000557265 COL19A1Q14993 1142 aa14.28□□□□□ -0.12
SNX6-209ENST00000557265 IMMTQ16891 758 aaKnown RBP14.28□□□□□ -0.12
SNX6-209ENST00000557265 IFIT1BQ5T764 474 aaKnown RBP14.28□□□□□ -0.12
SNX6-209ENST00000557265 POTEBQ6S5H4 581 aa14.28□□□□□ -0.12
SNX6-209ENST00000557265 FCHSD1Q86WN1 690 aa14.28□□□□□ -0.12
SNX6-209ENST00000557265 SAMD3Q8N6K7 520 aa14.28□□□□□ -0.12
SNX6-209ENST00000557265 MTMR8Q96EF0 704 aa14.28□□□□□ -0.12
SNX6-209ENST00000557265 SETD4Q9NVD3 440 aa14.28□□□□□ -0.12
SNX6-209ENST00000557265 FAM50BQ9Y247 325 aa14.28□□□□□ -0.12
SNX6-209ENST00000557265 GCOM1H8Y6P7 765 aaPredicted RBP14.27□□□□□ -0.13
SNX6-209ENST00000557265 NOP56O00567 594 aaKnown RBP14.27□□□□□ -0.13
SNX6-209ENST00000557265 CAND2O75155 1236 aa14.27□□□□□ -0.13
SNX6-209ENST00000557265 POLR2MP0CAP2 368 aa14.27□□□□□ -0.13
SNX6-209ENST00000557265 ZP2Q05996 745 aa14.27□□□□□ -0.13
SNX6-209ENST00000557265 HOMER1Q86YM7 354 aa14.27□□□□□ -0.13
SNX6-209ENST00000557265 IL17RAQ96F46 866 aa14.27□□□□□ -0.13
SNX6-209ENST00000557265 KRT23Q9C075 422 aa14.27□□□□□ -0.13
SNX6-209ENST00000557265 DIAPH3Q9NSV4 1193 aa14.27□□□□□ -0.13
SNX6-209ENST00000557265 CLDND1Q9NY35 253 aa14.27□□□□□ -0.13
SNX6-209ENST00000557265 MAD2L2Q9UI95 211 aa14.27□□□□□ -0.13
SNX6-209ENST00000557265 PALM3A6NDB9 673 aaPredicted RBP14.26□□□□□ -0.13
SNX6-209ENST00000557265 GNAT1P11488 350 aa14.26□□□□□ -0.13
SNX6-209ENST00000557265 B4GALNT3Q6L9W6 998 aa14.26□□□□□ -0.13
SNX6-209ENST00000557265 ADHFE1Q8IWW8 467 aa14.26□□□□□ -0.13
SNX6-209ENST00000557265 FIBCD1Q8N539 461 aa14.26□□□□□ -0.13
SNX6-209ENST00000557265 APBB2Q92870 758 aa14.26□□□□□ -0.13
SNX6-209ENST00000557265 DSCC1Q9BVC3 393 aa14.26□□□□□ -0.13
SNX6-209ENST00000557265 USP26Q9BXU7 913 aa14.26□□□□□ -0.13
SNX6-209ENST00000557265 CNNM2Q9H8M5 875 aa14.26□□□□□ -0.13
SNX6-209ENST00000557265 PRKAG3Q9UGI9 489 aa14.26□□□□□ -0.13
SNX6-209ENST00000557265 C19orf67A6NJJ6 358 aa14.25□□□□□ -0.13
SNX6-209ENST00000557265 CTNNB1P35222 781 aa14.25□□□□□ -0.13
SNX6-209ENST00000557265 LTBRP36941 435 aa14.25□□□□□ -0.13
SNX6-209ENST00000557265 MRE11P49959 708 aa14.25□□□□□ -0.13
SNX6-209ENST00000557265 RRP1P56182 461 aaKnown RBP14.25□□□□□ -0.13
SNX6-209ENST00000557265 SLC35G1Q2M3R5 365 aa14.25□□□□□ -0.13
SNX6-209ENST00000557265 METTL7BQ6UX53 244 aa14.25□□□□□ -0.13
SNX6-209ENST00000557265 CYFIP1Q7L576 1253 aa14.25□□□□□ -0.13
SNX6-209ENST00000557265 RPAINQ86UA6 219 aa14.25□□□□□ -0.13
SNX6-209ENST00000557265 TRIM50Q86XT4 487 aa14.25□□□□□ -0.13
SNX6-209ENST00000557265 FBXL18Q96ME1 805 aa14.25□□□□□ -0.13
SNX6-209ENST00000557265 PIGSQ96S52 555 aa14.25□□□□□ -0.13
SNX6-209ENST00000557265 GPR20Q99678 358 aa14.25□□□□□ -0.13
SNX6-209ENST00000557265 RTEL1Q9NZ71 1219 aa14.25□□□□□ -0.13
SNX6-209ENST00000557265 SPATA31C2B4DYI2 1134 aa14.24□□□□□ -0.13
SNX6-209ENST00000557265 NCK2O43639 380 aa14.24□□□□□ -0.13
SNX6-209ENST00000557265 IRS1P35568 1242 aa14.24□□□□□ -0.13
SNX6-209ENST00000557265 BMPR1AP36894 532 aa14.24□□□□□ -0.13
SNX6-209ENST00000557265 MRPS9P82933 396 aaKnown RBP14.24□□□□□ -0.13
SNX6-209ENST00000557265 ARHGAP4P98171 946 aa14.24□□□□□ -0.13
SNX6-209ENST00000557265 NHLH1Q02575 133 aa14.24□□□□□ -0.13
SNX6-209ENST00000557265 TRAF1Q13077 416 aa14.24□□□□□ -0.13
SNX6-209ENST00000557265 NEDD9Q14511 834 aa14.24□□□□□ -0.13
SNX6-209ENST00000557265 SEC23AQ15436 765 aa14.24□□□□□ -0.13
SNX6-209ENST00000557265 CLUL1Q15846 466 aa14.24□□□□□ -0.13
SNX6-209ENST00000557265 GNPTABQ3T906 1256 aa14.24□□□□□ -0.13
SNX6-209ENST00000557265 FAM26DQ5JW98 314 aa14.24□□□□□ -0.13
SNX6-209ENST00000557265 UTP14CQ5TAP6 766 aaKnown RBP14.24□□□□□ -0.13
SNX6-209ENST00000557265 PLEKHM2Q8IWE5 1019 aa14.24□□□□□ -0.13
SNX6-209ENST00000557265 INPP4AQ96PE3 977 aaPredicted RBP14.24□□□□□ -0.13
SNX6-209ENST00000557265 UPF3BQ9BZI7 483 aaKnown RBP14.24□□□□□ -0.13
SNX6-209ENST00000557265 TELO2Q9Y4R8 837 aa14.24□□□□□ -0.13
SNX6-209ENST00000557265 SUPT16HQ9Y5B9 1047 aaKnown RBP14.24□□□□□ -0.13
SNX6-209ENST00000557265 SIP14410 1827 aa14.23□□□□□ -0.13
SNX6-209ENST00000557265 PNMA6FA0A0J9YX94 578 aa14.23□□□□□ -0.13
SNX6-209ENST00000557265 C5orf67F2Z3F1 127 aa14.23□□□□□ -0.13
SNX6-209ENST00000557265 HIP1O00291 1037 aa14.23□□□□□ -0.13
SNX6-209ENST00000557265 GRM6O15303 877 aa14.23□□□□□ -0.13
SNX6-209ENST00000557265 CHRNA1P02708 482 aa14.23□□□□□ -0.13
SNX6-209ENST00000557265 RB1P06400 928 aa14.23□□□□□ -0.13
SNX6-209ENST00000557265 ICAM3P32942 547 aa14.23□□□□□ -0.13
SNX6-209ENST00000557265 ADAM17P78536 824 aa14.23□□□□□ -0.13
SNX6-209ENST00000557265 SP4Q02446 784 aa14.23□□□□□ -0.13
SNX6-209ENST00000557265 DLX2Q07687 328 aaPredicted RBP14.23□□□□□ -0.13
SNX6-209ENST00000557265 HYAL1Q12794 435 aa14.23□□□□□ -0.13
SNX6-209ENST00000557265 SEMA3FQ13275 785 aa14.23□□□□□ -0.13
SNX6-209ENST00000557265 SMAD2Q15796 467 aaKnown RBP14.23□□□□□ -0.13
SNX6-209ENST00000557265 CTC1Q2NKJ3 1217 aa14.23□□□□□ -0.13
SNX6-209ENST00000557265 HFE2Q6ZVN8 426 aa14.23□□□□□ -0.13
SNX6-209ENST00000557265 CYB5R4Q7L1T6 521 aa14.23□□□□□ -0.13
SNX6-209ENST00000557265 LMBR1Q8WVP7 490 aa14.23□□□□□ -0.13
SNX6-209ENST00000557265 C11orf84Q9BUA3 381 aaPredicted RBP14.23□□□□□ -0.13
SNX6-209ENST00000557265 OSBPL3Q9H4L5 887 aa14.23□□□□□ -0.13
SNX6-209ENST00000557265 RIOX1Q9H6W3 641 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms