RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 TRMT13Q9NUP7 481 aaKnown RBP13.17□□□□□ -0.3
SLIRP-206ENST00000556375 LAMA2P24043 3122 aaKnown RBP13.17□□□□□ -0.3
SLIRP-206ENST00000556375 NEK4P51957 841 aa13.16□□□□□ -0.3
SLIRP-206ENST00000556375 ARHGAP4P98171 946 aa13.16□□□□□ -0.3
SLIRP-206ENST00000556375 PPIGQ13427 754 aaKnown RBP eCLIP13.16□□□□□ -0.3
SLIRP-206ENST00000556375 MFSD10Q14728 455 aa13.16□□□□□ -0.3
SLIRP-206ENST00000556375 KIAA0753Q2KHM9 967 aa13.16□□□□□ -0.3
SLIRP-206ENST00000556375 LRIT3Q3SXY7 679 aa13.16□□□□□ -0.3
SLIRP-206ENST00000556375 CEP55Q53EZ4 464 aa13.16□□□□□ -0.3
SLIRP-206ENST00000556375 CRYGNQ8WXF5 182 aa13.16□□□□□ -0.3
SLIRP-206ENST00000556375 GPR20Q99678 358 aa13.16□□□□□ -0.3
SLIRP-206ENST00000556375 BCAS3Q9H6U6 928 aa13.16□□□□□ -0.3
SLIRP-206ENST00000556375 TRIP12Q14669 1992 aaPredicted RBP13.16□□□□□ -0.3
SLIRP-206ENST00000556375 SZT2Q5T011 3432 aa13.15□□□□□ -0.3
SLIRP-206ENST00000556375 ADAMTS3O15072 1205 aa13.15□□□□□ -0.3
SLIRP-206ENST00000556375 ATP9AO75110 1047 aa13.15□□□□□ -0.3
SLIRP-206ENST00000556375 LGALS2P05162 132 aa13.15□□□□□ -0.3
SLIRP-206ENST00000556375 CYP3A4P08684 503 aa13.15□□□□□ -0.3
SLIRP-206ENST00000556375 CYP2C18P33260 490 aa13.15□□□□□ -0.3
SLIRP-206ENST00000556375 CHMP4BP1P59074 171 aa13.15□□□□□ -0.3
SLIRP-206ENST00000556375 NIPA1Q7RTP0 329 aa13.15□□□□□ -0.3
SLIRP-206ENST00000556375 TMEM199Q8N511 208 aa13.15□□□□□ -0.3
SLIRP-206ENST00000556375 C7orf31Q8N865 590 aa13.15□□□□□ -0.3
SLIRP-206ENST00000556375 PPP1R13LQ8WUF5 828 aa13.15□□□□□ -0.3
SLIRP-206ENST00000556375 GTF3C6Q969F1 213 aa13.15□□□□□ -0.3
SLIRP-206ENST00000556375 C16orf70Q9BSU1 422 aa13.15□□□□□ -0.3
SLIRP-206ENST00000556375 KCNH7Q9NS40 1196 aa13.15□□□□□ -0.3
SLIRP-206ENST00000556375 GTF2IRD1Q9UHL9 959 aa13.15□□□□□ -0.3
SLIRP-206ENST00000556375 NOD1Q9Y239 953 aa13.15□□□□□ -0.3
SLIRP-206ENST00000556375 SCN5AQ14524 2016 aa13.15□□□□□ -0.3
SLIRP-206ENST00000556375 NFASCO94856 1347 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 UMODL1Q5DID0 1318 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 KAT6AQ92794 2004 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 MEIS1O00470 390 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 PITPNM1O00562 1244 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 LARGE1O95461 756 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 CYP2C9P11712 490 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 ZNF76P36508 570 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 EPHB4P54760 987 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 NLRP5P59047 1200 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 SP4Q02446 784 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 ME3Q16798 604 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 C9orf50Q5SZB4 431 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 GALNT17Q6IS24 598 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 GDF6Q6KF10 455 aaPredicted RBP13.14□□□□□ -0.31
SLIRP-206ENST00000556375 DAGLBQ8NCG7 672 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 CYP2W1Q8TAV3 490 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 RASGRP4Q8TDF6 673 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 ALG1Q9BT22 464 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 WNT8AQ9H1J5 351 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 JPH1Q9HDC5 661 aaPredicted RBP13.14□□□□□ -0.31
SLIRP-206ENST00000556375 PKD2L1Q9P0L9 805 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 HDAC6Q9UBN7 1215 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 ZNF215Q9UL58 517 aaPredicted RBP13.14□□□□□ -0.31
SLIRP-206ENST00000556375 PCDHA4Q9UN74 947 aa13.14□□□□□ -0.31
SLIRP-206ENST00000556375 IGLV3-22A0A075B6J6 115 aa13.13□□□□□ -0.31
SLIRP-206ENST00000556375 FAM86B1E9PN63 330 aa13.13□□□□□ -0.31
SLIRP-206ENST00000556375 H3BRB1 525 aa13.13□□□□□ -0.31
SLIRP-206ENST00000556375 SOX1O00570 391 aaPredicted RBP13.13□□□□□ -0.31
SLIRP-206ENST00000556375 CTDNEP1O95476 244 aa13.13□□□□□ -0.31
SLIRP-206ENST00000556375 FAM86B2P0C5J1 330 aa13.13□□□□□ -0.31
SLIRP-206ENST00000556375 ARP10275 920 aa13.13□□□□□ -0.31
SLIRP-206ENST00000556375 CSF2RAP15509 400 aa13.13□□□□□ -0.31
SLIRP-206ENST00000556375 RBM25P49756 843 aaKnown RBP13.13□□□□□ -0.31
SLIRP-206ENST00000556375 SETQ01105 290 aaPredicted RBP13.13□□□□□ -0.31
SLIRP-206ENST00000556375 SHHQ15465 462 aa13.13□□□□□ -0.31
SLIRP-206ENST00000556375 PTGISQ16647 500 aa13.13□□□□□ -0.31
SLIRP-206ENST00000556375 PSRC1Q6PGN9 363 aaPredicted RBP13.13□□□□□ -0.31
SLIRP-206ENST00000556375 TRIM50Q86XT4 487 aa13.13□□□□□ -0.31
SLIRP-206ENST00000556375 CCDC155Q8N6L0 562 aa13.13□□□□□ -0.31
SLIRP-206ENST00000556375 CAGE1Q8TC20 777 aa13.13□□□□□ -0.31
SLIRP-206ENST00000556375 AIFM3Q96NN9 605 aa13.13□□□□□ -0.31
SLIRP-206ENST00000556375 CTAGE1Q96RT6 745 aa13.13□□□□□ -0.31
SLIRP-206ENST00000556375 SDF4Q9BRK5 362 aa13.13□□□□□ -0.31
SLIRP-206ENST00000556375 C22orf23Q9BZE7 217 aa13.13□□□□□ -0.31
SLIRP-206ENST00000556375 TUT1Q9H6E5 874 aaKnown RBP13.13□□□□□ -0.31
SLIRP-206ENST00000556375 AGO4Q9HCK5 861 aaKnown RBP13.13□□□□□ -0.31
SLIRP-206ENST00000556375 TELO2Q9Y4R8 837 aa13.13□□□□□ -0.31
SLIRP-206ENST00000556375 SLC34A2O95436 690 aa13.12□□□□□ -0.31
SLIRP-206ENST00000556375 XBP1P17861 261 aa13.12□□□□□ -0.31
SLIRP-206ENST00000556375 HOXC8P31273 242 aa13.12□□□□□ -0.31
SLIRP-206ENST00000556375 TCF7P36402 384 aaPredicted RBP13.12□□□□□ -0.31
SLIRP-206ENST00000556375 CCL23P55773 120 aa13.12□□□□□ -0.31
SLIRP-206ENST00000556375 RBL2Q08999 1139 aa13.12□□□□□ -0.31
SLIRP-206ENST00000556375 ITGB3BPQ13352 177 aaPredicted RBP13.12□□□□□ -0.31
SLIRP-206ENST00000556375 BFSP2Q13515 415 aa13.12□□□□□ -0.31
SLIRP-206ENST00000556375 NPY5RQ15761 445 aa13.12□□□□□ -0.31
SLIRP-206ENST00000556375 UTP14CQ5TAP6 766 aaKnown RBP13.12□□□□□ -0.31
SLIRP-206ENST00000556375 PLA2G4DQ86XP0 818 aa13.12□□□□□ -0.31
SLIRP-206ENST00000556375 BLIDQ8IZY5 108 aa13.12□□□□□ -0.31
SLIRP-206ENST00000556375 NECAB1Q8N987 351 aa13.12□□□□□ -0.31
SLIRP-206ENST00000556375 SEPT1Q8WYJ6 367 aa13.12□□□□□ -0.31
SLIRP-206ENST00000556375 WASF1Q92558 559 aa13.12□□□□□ -0.31
SLIRP-206ENST00000556375 RNPC3Q96LT9 517 aaKnown RBP13.12□□□□□ -0.31
SLIRP-206ENST00000556375 KIF2CQ99661 725 aa13.12□□□□□ -0.31
SLIRP-206ENST00000556375 IL23AQ9NPF7 189 aa13.12□□□□□ -0.31
SLIRP-206ENST00000556375 ORC3Q9UBD5 711 aaPredicted RBP13.12□□□□□ -0.31
SLIRP-206ENST00000556375 SLC9A2Q9UBY0 812 aa13.12□□□□□ -0.31
SLIRP-206ENST00000556375 EMSYQ7Z589 1322 aa13.12□□□□□ -0.31
SLIRP-206ENST00000556375 WDR81Q562E7 1941 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms