RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 RRAGBQ5VZM2 374 aa10.36□□□□□ -0.75
ACTN1-218ENST00000556343 NCAPH2Q6IBW4 605 aa10.36□□□□□ -0.75
ACTN1-218ENST00000556343 ZNF746Q6NUN9 644 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-218ENST00000556343 OTOP1Q7RTM1 612 aa10.36□□□□□ -0.75
ACTN1-218ENST00000556343 MIER3Q7Z3K6 550 aa10.36□□□□□ -0.75
ACTN1-218ENST00000556343 SMAP1Q8IYB5 467 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-218ENST00000556343 TIGD1Q96MW7 591 aa10.36□□□□□ -0.75
ACTN1-218ENST00000556343 CUEDC2Q9H467 287 aa10.36□□□□□ -0.75
ACTN1-218ENST00000556343 MLXIPQ9HAP2 919 aa10.36□□□□□ -0.75
ACTN1-218ENST00000556343 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-218ENST00000556343 NRBP1Q9UHY1 535 aa10.36□□□□□ -0.75
ACTN1-218ENST00000556343 SAMM50Q9Y512 469 aa10.36□□□□□ -0.75
ACTN1-218ENST00000556343 NKRFO15226 690 aaKnown RBP eCLIP10.35□□□□□ -0.75
ACTN1-218ENST00000556343 PSMD10O75832 226 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 ECM2O94769 699 aaPredicted RBP10.35□□□□□ -0.75
ACTN1-218ENST00000556343 ZNF202O95125 648 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 CCT6AP40227 531 aaKnown RBP10.35□□□□□ -0.75
ACTN1-218ENST00000556343 NDUFA8P51970 172 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 AMPD3Q01432 767 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 ZRSR1Q15695 479 aaKnown RBP10.35□□□□□ -0.75
ACTN1-218ENST00000556343 IL17AQ16552 155 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 SPECC1Q5M775 1068 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 CCDC183Q5T5S1 534 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 IQSEC1Q6DN90 963 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 MIS18BP1Q6P0N0 1132 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 EEPD1Q7L9B9 569 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 CNNM3Q8NE01 707 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 NPLOC4Q8TAT6 608 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 SNX29Q8TEQ0 813 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 USP6NLQ92738 828 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 EPSTI1Q96J88 318 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 ZFP91Q96JP5 570 aaPredicted RBP10.35□□□□□ -0.75
ACTN1-218ENST00000556343 POLR3CQ9BUI4 534 aaPredicted RBP10.35□□□□□ -0.75
ACTN1-218ENST00000556343 R3HDMLQ9H3Y0 253 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 MAGEF1Q9HAY2 307 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 JPH1Q9HDC5 661 aaPredicted RBP10.35□□□□□ -0.75
ACTN1-218ENST00000556343 TUFT1Q9NNX1 390 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 DACT1Q9NYF0 836 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 SLC9A2Q9UBY0 812 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 GJD2Q9UKL4 321 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 HPSEQ9Y251 543 aa10.35□□□□□ -0.75
ACTN1-218ENST00000556343 SMCHD1A6NHR9 2005 aa10.34□□□□□ -0.75
ACTN1-218ENST00000556343 RBM47A0AV96 593 aaKnown RBP10.34□□□□□ -0.75
ACTN1-218ENST00000556343 WDR64B1ANS9 1081 aa10.34□□□□□ -0.75
ACTN1-218ENST00000556343 NOP56O00567 594 aaKnown RBP10.34□□□□□ -0.75
ACTN1-218ENST00000556343 POLR2DO15514 142 aaKnown RBP10.34□□□□□ -0.75
ACTN1-218ENST00000556343 P4HBP07237 508 aaKnown RBP10.34□□□□□ -0.75
ACTN1-218ENST00000556343 PSAPP07602 524 aa10.34□□□□□ -0.75
ACTN1-218ENST00000556343 TXNP10599 105 aaKnown RBP10.34□□□□□ -0.75
ACTN1-218ENST00000556343 LIG1P18858 919 aa10.34□□□□□ -0.75
ACTN1-218ENST00000556343 STAT6P42226 847 aa10.34□□□□□ -0.75
ACTN1-218ENST00000556343 FLT3LGP49771 235 aa10.34□□□□□ -0.75
ACTN1-218ENST00000556343 GRIN1Q05586 938 aa10.34□□□□□ -0.75
ACTN1-218ENST00000556343 ACVR2BQ13705 512 aa10.34□□□□□ -0.75
ACTN1-218ENST00000556343 LAMC2Q13753 1193 aa10.34□□□□□ -0.75
ACTN1-218ENST00000556343 BRDTQ58F21 947 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-218ENST00000556343 DHX37Q8IY37 1157 aaKnown RBP10.34□□□□□ -0.75
ACTN1-218ENST00000556343 ELOA2Q8IYF1 753 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-218ENST00000556343 RAET1EQ8TD07 263 aa10.34□□□□□ -0.75
ACTN1-218ENST00000556343 GPT2Q8TD30 523 aa10.34□□□□□ -0.75
ACTN1-218ENST00000556343 TRIM47Q96LD4 638 aa10.34□□□□□ -0.75
ACTN1-218ENST00000556343 FGD4Q96M96 766 aa10.34□□□□□ -0.75
ACTN1-218ENST00000556343 NUP62CLQ9H1M0 184 aa10.34□□□□□ -0.75
ACTN1-218ENST00000556343 TNMDQ9H2S6 317 aa10.34□□□□□ -0.75
ACTN1-218ENST00000556343 DISC1Q9NRI5 854 aa10.34□□□□□ -0.75
ACTN1-218ENST00000556343 BMP2KQ9NSY1 1161 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-218ENST00000556343 PKD2L1Q9P0L9 805 aa10.34□□□□□ -0.75
ACTN1-218ENST00000556343 STK17AQ9UEE5 414 aa10.34□□□□□ -0.75
ACTN1-218ENST00000556343 SRRDQ9UH36 339 aa10.34□□□□□ -0.75
ACTN1-218ENST00000556343 DDX41Q9UJV9 622 aaKnown RBP10.34□□□□□ -0.75
ACTN1-218ENST00000556343 ZHX1Q9UKY1 873 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-218ENST00000556343 DNM3Q9UQ16 869 aa10.34□□□□□ -0.75
ACTN1-218ENST00000556343 PCDHA10Q9Y5I2 948 aa10.34□□□□□ -0.75
ACTN1-218ENST00000556343 POTEMA6NI47 508 aa10.33□□□□□ -0.76
ACTN1-218ENST00000556343 DDX39AO00148 427 aaKnown RBP10.33□□□□□ -0.76
ACTN1-218ENST00000556343 DHX15O43143 795 aaKnown RBP10.33□□□□□ -0.76
ACTN1-218ENST00000556343 CHMP2AO43633 222 aa10.33□□□□□ -0.76
ACTN1-218ENST00000556343 ATP9AO75110 1047 aa10.33□□□□□ -0.76
ACTN1-218ENST00000556343 NR1I2O75469 434 aa10.33□□□□□ -0.76
ACTN1-218ENST00000556343 RGS20O76081 388 aa10.33□□□□□ -0.76
ACTN1-218ENST00000556343 SNAI1O95863 264 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-218ENST00000556343 GH1P01241 217 aa10.33□□□□□ -0.76
ACTN1-218ENST00000556343 MYL1P05976 194 aa10.33□□□□□ -0.76
ACTN1-218ENST00000556343 SLFN14P0C7P3 912 aa10.33□□□□□ -0.76
ACTN1-218ENST00000556343 KCNA2P16389 499 aa10.33□□□□□ -0.76
ACTN1-218ENST00000556343 RPA1P27694 616 aa10.33□□□□□ -0.76
ACTN1-218ENST00000556343 HYIQ5T013 277 aa10.33□□□□□ -0.76
ACTN1-218ENST00000556343 FAM160B1Q5W0V3 765 aa10.33□□□□□ -0.76
ACTN1-218ENST00000556343 CAVIN1Q6NZI2 390 aaKnown RBP10.33□□□□□ -0.76
ACTN1-218ENST00000556343 METTL7BQ6UX53 244 aa10.33□□□□□ -0.76
ACTN1-218ENST00000556343 KRBA2Q6ZNG9 492 aa10.33□□□□□ -0.76
ACTN1-218ENST00000556343 SV2BQ7L1I2 683 aa10.33□□□□□ -0.76
ACTN1-218ENST00000556343 CYFIP1Q7L576 1253 aa10.33□□□□□ -0.76
ACTN1-218ENST00000556343 FBXO16Q8IX29 292 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-218ENST00000556343 FMR1NBQ8N0W7 255 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-218ENST00000556343 PDILTQ8N807 584 aa10.33□□□□□ -0.76
ACTN1-218ENST00000556343 ENGASEQ8NFI3 743 aa10.33□□□□□ -0.76
ACTN1-218ENST00000556343 CD99L2Q8TCZ2 262 aa10.33□□□□□ -0.76
ACTN1-218ENST00000556343 SEPT1Q8WYJ6 367 aa10.33□□□□□ -0.76
ACTN1-218ENST00000556343 CCDC47Q96A33 483 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms