RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 BMP2KQ9NSY1 1161 aaPredicted RBP16.43■□□□□ 0.22
VPS33B-205ENST00000556096 INTS13Q9NVM9 706 aa16.43■□□□□ 0.22
VPS33B-205ENST00000556096 PYCARDQ9ULZ3 195 aa16.43■□□□□ 0.22
VPS33B-205ENST00000556096 FRMPD4Q14CM0 1322 aa16.43■□□□□ 0.22
VPS33B-205ENST00000556096 LOC285556D6RIA3 1793 aa16.43■□□□□ 0.22
VPS33B-205ENST00000556096 POTEB3A0JP26 581 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 ATP2A1O14983 1001 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 PLA2G4BP0C869 781 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 SPATA31C1P0DKV0 1188 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 FKBP1BP68106 108 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 EHHADHQ08426 723 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 LRMPQ12912 555 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 STK4Q13043 487 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 PPP2R5CQ13362 524 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 HSP90AA4PQ58FG1 418 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 LDLRAD1Q5T700 205 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 POTEBQ6S5H4 581 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 OTOP1Q7RTM1 612 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 SYTL5Q8TDW5 730 aaPredicted RBP16.42■□□□□ 0.22
VPS33B-205ENST00000556096 DNAJC19Q96DA6 116 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 TRERF1Q96PN7 1200 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 COL20A1Q9P218 1284 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 LIMA1Q9UHB6 759 aaKnown RBP16.42■□□□□ 0.22
VPS33B-205ENST00000556096 MAPK8IP1Q9UQF2 711 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 RLFQ13129 1914 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 BICDL2A1A5D9 508 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 E9PMD0 336 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 CCNE1P24864 410 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 ZNF157P51786 506 aaPredicted RBP16.42■□□□□ 0.22
VPS33B-205ENST00000556096 LRCH2Q5VUJ6 765 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 DYMQ7RTS9 669 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 NOC3LQ8WTT2 800 aaKnown RBP16.42■□□□□ 0.22
VPS33B-205ENST00000556096 SPTLC3Q9NUV7 552 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 HOXC10Q9NYD6 342 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 ADD3Q9UEY8 706 aaKnown RBP16.42■□□□□ 0.22
VPS33B-205ENST00000556096 DNM3Q9UQ16 869 aa16.42■□□□□ 0.22
VPS33B-205ENST00000556096 MUTP22033 750 aa16.41■□□□□ 0.22
VPS33B-205ENST00000556096 UBXN2AP68543 259 aa16.41■□□□□ 0.22
VPS33B-205ENST00000556096 NOLC1Q14978 699 aaKnown RBP eCLIP16.41■□□□□ 0.22
VPS33B-205ENST00000556096 FILIP1LQ4L180 1135 aa16.41■□□□□ 0.22
VPS33B-205ENST00000556096 PCNX4Q63HM2 1172 aa16.41■□□□□ 0.22
VPS33B-205ENST00000556096 RGMBQ6NW40 437 aa16.41■□□□□ 0.22
VPS33B-205ENST00000556096 TTI2Q6NXR4 508 aa16.41■□□□□ 0.22
VPS33B-205ENST00000556096 SLC10A4Q96EP9 437 aa16.41■□□□□ 0.22
VPS33B-205ENST00000556096 RIT2Q99578 217 aa16.41■□□□□ 0.22
VPS33B-205ENST00000556096 EIF2AK1Q9BQI3 630 aaKnown RBP16.41■□□□□ 0.22
VPS33B-205ENST00000556096 WDR11Q9BZH6 1224 aa16.41■□□□□ 0.22
VPS33B-205ENST00000556096 THAP9Q9H5L6 903 aa16.41■□□□□ 0.22
VPS33B-205ENST00000556096 TUFT1Q9NNX1 390 aa16.41■□□□□ 0.22
VPS33B-205ENST00000556096 FCER1AP12319 257 aa16.4■□□□□ 0.22
VPS33B-205ENST00000556096 SLC12A3P55017 1021 aa16.4■□□□□ 0.22
VPS33B-205ENST00000556096 RPS6P62753 249 aaKnown RBP16.4■□□□□ 0.22
VPS33B-205ENST00000556096 ARID5BQ14865 1188 aa16.4■□□□□ 0.22
VPS33B-205ENST00000556096 DEFB115Q30KQ5 88 aa16.4■□□□□ 0.22
VPS33B-205ENST00000556096 TKFCQ3LXA3 575 aa16.4■□□□□ 0.22
VPS33B-205ENST00000556096 B3GNT9Q6UX72 402 aa16.4■□□□□ 0.22
VPS33B-205ENST00000556096 RNF207Q6ZRF8 634 aa16.4■□□□□ 0.22
VPS33B-205ENST00000556096 ERO1BQ86YB8 467 aa16.4■□□□□ 0.22
VPS33B-205ENST00000556096 SYT2Q8N9I0 419 aaPredicted RBP16.4■□□□□ 0.22
VPS33B-205ENST00000556096 KIAA0895Q8NCT3 520 aa16.4■□□□□ 0.22
VPS33B-205ENST00000556096 ANKRD20A12PQ8NF67 263 aa16.4■□□□□ 0.22
VPS33B-205ENST00000556096 P2RX5Q93086 422 aa16.4■□□□□ 0.22
VPS33B-205ENST00000556096 OTUD5Q96G74 571 aa16.4■□□□□ 0.22
VPS33B-205ENST00000556096 WNK4Q96J92 1243 aa16.4■□□□□ 0.22
VPS33B-205ENST00000556096 HSD17B14Q9BPX1 270 aa16.4■□□□□ 0.22
VPS33B-205ENST00000556096 ZNF577Q9BSK1 485 aa16.4■□□□□ 0.22
VPS33B-205ENST00000556096 HOMER2Q9NSB8 354 aa16.4■□□□□ 0.22
VPS33B-205ENST00000556096 UBIAD1Q9Y5Z9 338 aa16.4■□□□□ 0.22
VPS33B-205ENST00000556096 RBBP6Q7Z6E9 1792 aaKnown RBP16.4■□□□□ 0.22
VPS33B-205ENST00000556096 COL11A1P12107 1806 aaPredicted RBP16.4■□□□□ 0.22
VPS33B-205ENST00000556096 POTEFA5A3E0 1075 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 SPDYE5A6NIY4 337 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 EML1O00423 815 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 GAS7O60861 476 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 ARP10275 920 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 ITGB5P18084 799 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 CYP11B2P19099 503 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 GJA5P36382 358 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 PMS1P54277 932 aaKnown RBP16.39■□□□□ 0.21
VPS33B-205ENST00000556096 PPATQ06203 517 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 TBX2Q13207 712 aaPredicted RBP16.39■□□□□ 0.21
VPS33B-205ENST00000556096 TCP11X2Q5H9J9 407 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 FOXR2Q6PJQ5 311 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 POTEGQ6S5H5 508 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 POTEEQ6S8J3 1075 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 RASAL3Q86YV0 1011 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 GUF1Q8N442 669 aaKnown RBP16.39■□□□□ 0.21
VPS33B-205ENST00000556096 OPTNQ96CV9 577 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 RNF146Q9NTX7 359 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 ZNF214Q9UL59 606 aaPredicted RBP16.39■□□□□ 0.21
VPS33B-205ENST00000556096 TRIM49BA6NDI0 452 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 IPO5O00410 1097 aaKnown RBP16.39■□□□□ 0.21
VPS33B-205ENST00000556096 AOC2O75106 756 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 COBLO75128 1261 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 OFD1O75665 1012 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 IDEP14735 1019 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 SFPQP23246 707 aaKnown RBP eCLIP16.39■□□□□ 0.21
VPS33B-205ENST00000556096 CCZ1BP86790 482 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 CCZ1P86791 482 aaPredicted RBP16.39■□□□□ 0.21
VPS33B-205ENST00000556096 SPECC1LQ69YQ0 1117 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms