RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 PKD2L1Q9P0L9 805 aa21.09■□□□□ 0.97
NEDD1-208ENST00000555806 SCN5AQ14524 2016 aa21.09■□□□□ 0.97
NEDD1-208ENST00000555806 H3BRB1 525 aa21.08■□□□□ 0.97
NEDD1-208ENST00000555806 MTMR1Q13613 665 aa21.08■□□□□ 0.97
NEDD1-208ENST00000555806 RUFY3Q7L099 469 aa21.08■□□□□ 0.97
NEDD1-208ENST00000555806 GIMAP8Q8ND71 665 aaPredicted RBP21.08■□□□□ 0.97
NEDD1-208ENST00000555806 CTAGE1Q96RT6 745 aa21.08■□□□□ 0.97
NEDD1-208ENST00000555806 GPR20Q99678 358 aa21.08■□□□□ 0.97
NEDD1-208ENST00000555806 AGXT2Q9BYV1 514 aa21.08■□□□□ 0.97
NEDD1-208ENST00000555806 TTYH1Q9H313 450 aaPredicted RBP21.08■□□□□ 0.97
NEDD1-208ENST00000555806 TUT1Q9H6E5 874 aaKnown RBP21.08■□□□□ 0.97
NEDD1-208ENST00000555806 UBIAD1Q9Y5Z9 338 aa21.08■□□□□ 0.97
NEDD1-208ENST00000555806 NID2Q14112 1375 aa21.08■□□□□ 0.96
NEDD1-208ENST00000555806 TMEM265A0A087WTH1 108 aa21.07■□□□□ 0.96
NEDD1-208ENST00000555806 ACTN1P12814 892 aa21.07■□□□□ 0.96
NEDD1-208ENST00000555806 SCG2P13521 617 aa21.07■□□□□ 0.96
NEDD1-208ENST00000555806 ITGB5P18084 799 aa21.07■□□□□ 0.96
NEDD1-208ENST00000555806 AKAP17AQ02040 695 aaKnown RBP21.07■□□□□ 0.96
NEDD1-208ENST00000555806 PFKFB3Q16875 520 aaPredicted RBP21.07■□□□□ 0.96
NEDD1-208ENST00000555806 UTP14CQ5TAP6 766 aaKnown RBP21.07■□□□□ 0.96
NEDD1-208ENST00000555806 TEX2Q8IWB9 1127 aa21.07■□□□□ 0.96
NEDD1-208ENST00000555806 AFAP1L1Q8TED9 768 aa21.07■□□□□ 0.96
NEDD1-208ENST00000555806 DHX38Q92620 1227 aaKnown RBP21.07■□□□□ 0.96
NEDD1-208ENST00000555806 TIFAQ96CG3 184 aa21.07■□□□□ 0.96
NEDD1-208ENST00000555806 VWCEQ96DN2 955 aa21.07■□□□□ 0.96
NEDD1-208ENST00000555806 ANO3Q9BYT9 981 aa21.07■□□□□ 0.96
NEDD1-208ENST00000555806 FTOQ9C0B1 505 aaKnown RBP eCLIP21.07■□□□□ 0.96
NEDD1-208ENST00000555806 GLT8D2Q9H1C3 349 aa21.07■□□□□ 0.96
NEDD1-208ENST00000555806 CYP46A1Q9Y6A2 500 aa21.07■□□□□ 0.96
NEDD1-208ENST00000555806 SLC4A7Q9Y6M7 1214 aa21.07■□□□□ 0.96
NEDD1-208ENST00000555806 FOSP01100 380 aaPredicted RBP21.06■□□□□ 0.96
NEDD1-208ENST00000555806 PBX2P40425 430 aa21.06■□□□□ 0.96
NEDD1-208ENST00000555806 ZNF200P98182 395 aaPredicted RBP21.06■□□□□ 0.96
NEDD1-208ENST00000555806 LRRC8DQ7L1W4 858 aa21.06■□□□□ 0.96
NEDD1-208ENST00000555806 PHKBQ93100 1093 aa21.06■□□□□ 0.96
NEDD1-208ENST00000555806 PBX4Q9BYU1 374 aa21.06■□□□□ 0.96
NEDD1-208ENST00000555806 ZSWIM6Q9HCJ5 1215 aa21.06■□□□□ 0.96
NEDD1-208ENST00000555806 JADE2Q9NQC1 790 aa21.06■□□□□ 0.96
NEDD1-208ENST00000555806 TMEM260Q9NX78 707 aa21.06■□□□□ 0.96
NEDD1-208ENST00000555806 ZNF215Q9UL58 517 aaPredicted RBP21.06■□□□□ 0.96
NEDD1-208ENST00000555806 TELO2Q9Y4R8 837 aa21.06■□□□□ 0.96
NEDD1-208ENST00000555806 C17orf102A2RUQ5 167 aa21.05■□□□□ 0.96
NEDD1-208ENST00000555806 ATP9AO75110 1047 aa21.05■□□□□ 0.96
NEDD1-208ENST00000555806 SMIM10L2AP0DMW4 78 aa21.05■□□□□ 0.96
NEDD1-208ENST00000555806 SMIM10L2BP0DMW5 78 aa21.05■□□□□ 0.96
NEDD1-208ENST00000555806 SELPP16109 830 aa21.05■□□□□ 0.96
NEDD1-208ENST00000555806 KCNA2P16389 499 aa21.05■□□□□ 0.96
NEDD1-208ENST00000555806 CCT2P78371 535 aaKnown RBP21.05■□□□□ 0.96
NEDD1-208ENST00000555806 PTK7Q13308 1070 aa21.05■□□□□ 0.96
NEDD1-208ENST00000555806 AP3B2Q13367 1082 aa21.05■□□□□ 0.96
NEDD1-208ENST00000555806 TRIM50Q86XT4 487 aa21.05■□□□□ 0.96
NEDD1-208ENST00000555806 CCDC12Q8WUD4 166 aaPredicted RBP21.05■□□□□ 0.96
NEDD1-208ENST00000555806 CDX2Q99626 313 aaPredicted RBP21.05■□□□□ 0.96
NEDD1-208ENST00000555806 MSRAQ9UJ68 235 aa21.05■□□□□ 0.96
NEDD1-208ENST00000555806 PRPF3O43395 683 aaKnown RBP21.04■□□□□ 0.96
NEDD1-208ENST00000555806 PPFIA3O75145 1194 aa21.04■□□□□ 0.96
NEDD1-208ENST00000555806 CKBP12277 381 aa21.04■□□□□ 0.96
NEDD1-208ENST00000555806 PDIA3P30101 505 aaKnown RBP21.04■□□□□ 0.96
NEDD1-208ENST00000555806 RAB30Q15771 203 aa21.04■□□□□ 0.96
NEDD1-208ENST00000555806 JAKMIP3Q5VZ66 844 aa21.04■□□□□ 0.96
NEDD1-208ENST00000555806 MXRA8Q9BRK3 442 aa21.04■□□□□ 0.96
NEDD1-208ENST00000555806 UPF3BQ9BZI7 483 aaKnown RBP21.04■□□□□ 0.96
NEDD1-208ENST00000555806 NCOA5Q9HCD5 579 aaKnown RBP21.04■□□□□ 0.96
NEDD1-208ENST00000555806 TRIP12Q14669 1992 aaPredicted RBP21.04■□□□□ 0.96
NEDD1-208ENST00000555806 MAFGO15525 162 aa21.03■□□□□ 0.96
NEDD1-208ENST00000555806 TCF7P36402 384 aaPredicted RBP21.03■□□□□ 0.96
NEDD1-208ENST00000555806 ZNF76P36508 570 aa21.03■□□□□ 0.96
NEDD1-208ENST00000555806 RBL2Q08999 1139 aa21.03■□□□□ 0.96
NEDD1-208ENST00000555806 TOB2Q14106 344 aaPredicted RBP21.03■□□□□ 0.96
NEDD1-208ENST00000555806 HIC1Q14526 733 aa21.03■□□□□ 0.96
NEDD1-208ENST00000555806 MYLIPQ8WY64 445 aa21.03■□□□□ 0.96
NEDD1-208ENST00000555806 ATP6V0A1Q93050 837 aa21.03■□□□□ 0.96
NEDD1-208ENST00000555806 WNT8BQ93098 351 aa21.03■□□□□ 0.96
NEDD1-208ENST00000555806 SLC26A6Q9BXS9 759 aa21.03■□□□□ 0.96
NEDD1-208ENST00000555806 TM6SF1Q9BZW5 370 aa21.03■□□□□ 0.96
NEDD1-208ENST00000555806 C6orf50Q9HD87 102 aa21.03■□□□□ 0.96
NEDD1-208ENST00000555806 ESYT2A0FGR8 921 aa21.02■□□□□ 0.96
NEDD1-208ENST00000555806 ATP2A2P16615 1042 aaKnown RBP21.02■□□□□ 0.96
NEDD1-208ENST00000555806 SREBF1P36956 1147 aa21.02■□□□□ 0.96
NEDD1-208ENST00000555806 CLK2P49760 499 aaKnown RBP21.02■□□□□ 0.96
NEDD1-208ENST00000555806 EVCP57679 992 aa21.02■□□□□ 0.96
NEDD1-208ENST00000555806 NTRK3Q16288 839 aa21.02■□□□□ 0.96
NEDD1-208ENST00000555806 PKN1Q16512 942 aa21.02■□□□□ 0.96
NEDD1-208ENST00000555806 CYP2W1Q8TAV3 490 aa21.02■□□□□ 0.96
NEDD1-208ENST00000555806 SEPT1Q8WYJ6 367 aa21.02■□□□□ 0.96
NEDD1-208ENST00000555806 RNF26Q9BY78 433 aaPredicted RBP21.02■□□□□ 0.96
NEDD1-208ENST00000555806 RNPEPQ9H4A4 650 aa21.02■□□□□ 0.96
NEDD1-208ENST00000555806 ZNF576Q9H609 170 aa21.02■□□□□ 0.96
NEDD1-208ENST00000555806 KCNH7Q9NS40 1196 aa21.02■□□□□ 0.96
NEDD1-208ENST00000555806 PARNO95453 639 aaKnown RBP21.01■□□□□ 0.95
NEDD1-208ENST00000555806 GNAT1P11488 350 aa21.01■□□□□ 0.95
NEDD1-208ENST00000555806 IFNAR1P17181 557 aa21.01■□□□□ 0.95
NEDD1-208ENST00000555806 RABGGTBP53611 331 aa21.01■□□□□ 0.95
NEDD1-208ENST00000555806 TRIM71Q2Q1W2 868 aaKnown RBP21.01■□□□□ 0.95
NEDD1-208ENST00000555806 CEP55Q53EZ4 464 aa21.01■□□□□ 0.95
NEDD1-208ENST00000555806 ZNF618Q5T7W0 954 aa21.01■□□□□ 0.95
NEDD1-208ENST00000555806 SERINC5Q86VE9 423 aa21.01■□□□□ 0.95
NEDD1-208ENST00000555806 SDF4Q9BRK5 362 aa21.01■□□□□ 0.95
NEDD1-208ENST00000555806 LARP6Q9BRS8 491 aaKnown RBP21.01■□□□□ 0.95
NEDD1-208ENST00000555806 ZMYND12Q9H0C1 365 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms