RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 KCNV2Q8TDN2 545 aa18.93■□□□□ 0.62
SYNE3-204ENST00000555759 NT5C1BQ96P26 610 aa18.93■□□□□ 0.62
SYNE3-204ENST00000555759 EYA3Q99504 573 aa18.93■□□□□ 0.62
SYNE3-204ENST00000555759 BAG5Q9UL15 447 aa18.93■□□□□ 0.62
SYNE3-204ENST00000555759 MAD1L1Q9Y6D9 718 aa18.93■□□□□ 0.62
SYNE3-204ENST00000555759 NR5A1Q13285 461 aa18.93■□□□□ 0.62
SYNE3-204ENST00000555759 CUL3Q13618 768 aa18.93■□□□□ 0.62
SYNE3-204ENST00000555759 RSBN1LQ6PCB5 846 aaPredicted RBP18.93■□□□□ 0.62
SYNE3-204ENST00000555759 CENPUQ71F23 418 aa18.93■□□□□ 0.62
SYNE3-204ENST00000555759 KSR1Q8IVT5 923 aa18.93■□□□□ 0.62
SYNE3-204ENST00000555759 FAM186BQ8IYM0 893 aa18.93■□□□□ 0.62
SYNE3-204ENST00000555759 SLC17A8Q8NDX2 589 aa18.93■□□□□ 0.62
SYNE3-204ENST00000555759 NUDCD1Q96RS6 583 aa18.93■□□□□ 0.62
SYNE3-204ENST00000555759 MRPL46Q9H2W6 279 aaKnown RBP18.93■□□□□ 0.62
SYNE3-204ENST00000555759 A0A1W2PQC6 194 aa18.93■□□□□ 0.62
SYNE3-204ENST00000555759 K7ENM7 598 aa18.93■□□□□ 0.62
SYNE3-204ENST00000555759 HNRNPH1P31943 449 aaKnown RBP18.93■□□□□ 0.62
SYNE3-204ENST00000555759 HDLBPQ00341 1268 aaKnown RBP18.93■□□□□ 0.62
SYNE3-204ENST00000555759 PDZD4Q76G19 769 aaPredicted RBP18.93■□□□□ 0.62
SYNE3-204ENST00000555759 RNF34Q969K3 372 aa18.93■□□□□ 0.62
SYNE3-204ENST00000555759 MID2Q9UJV3 735 aa18.93■□□□□ 0.62
SYNE3-204ENST00000555759 NCKAP5LQ9HCH0 1330 aa18.93■□□□□ 0.62
SYNE3-204ENST00000555759 TTI1O43156 1089 aa18.93■□□□□ 0.62
SYNE3-204ENST00000555759 ACTN1P12814 892 aa18.93■□□□□ 0.62
SYNE3-204ENST00000555759 CCND1P24385 295 aa18.93■□□□□ 0.62
SYNE3-204ENST00000555759 CSRNP1Q96S65 589 aa18.93■□□□□ 0.62
SYNE3-204ENST00000555759 FAM187AA6NFU0 413 aa18.92■□□□□ 0.62
SYNE3-204ENST00000555759 M0R2C6 588 aa18.92■□□□□ 0.62
SYNE3-204ENST00000555759 GUCY1A3Q02108 690 aa18.92■□□□□ 0.62
SYNE3-204ENST00000555759 GJA10Q969M2 543 aa18.92■□□□□ 0.62
SYNE3-204ENST00000555759 CYTH2Q99418 400 aa18.92■□□□□ 0.62
SYNE3-204ENST00000555759 HAUS2Q9NVX0 235 aa18.92■□□□□ 0.62
SYNE3-204ENST00000555759 DNAJC5BQ9UF47 199 aa18.92■□□□□ 0.62
SYNE3-204ENST00000555759 LRRC43Q8N309 656 aa18.92■□□□□ 0.62
SYNE3-204ENST00000555759 ADAMTS1Q9UHI8 967 aa18.92■□□□□ 0.62
SYNE3-204ENST00000555759 HPCAL4Q9UM19 191 aa18.92■□□□□ 0.62
SYNE3-204ENST00000555759 STK36Q9NRP7 1315 aa18.92■□□□□ 0.62
SYNE3-204ENST00000555759 hCG_1984214I3L0E3 225 aa18.92■□□□□ 0.62
SYNE3-204ENST00000555759 ACSL3O95573 720 aa18.92■□□□□ 0.62
SYNE3-204ENST00000555759 CRYMQ14894 314 aa18.92■□□□□ 0.62
SYNE3-204ENST00000555759 ZNF713Q8N859 430 aaPredicted RBP18.92■□□□□ 0.62
SYNE3-204ENST00000555759 ZNF496Q96IT1 587 aaPredicted RBP18.92■□□□□ 0.62
SYNE3-204ENST00000555759 MRPL47Q9HD33 250 aaKnown RBP18.92■□□□□ 0.62
SYNE3-204ENST00000555759 SPATA4Q8NEY3 305 aa18.92■□□□□ 0.62
SYNE3-204ENST00000555759 AZI2Q9H6S1 392 aa18.92■□□□□ 0.62
SYNE3-204ENST00000555759 L2HGDHQ9H9P8 463 aa18.92■□□□□ 0.62
SYNE3-204ENST00000555759 PLS3P13797 630 aa18.91■□□□□ 0.62
SYNE3-204ENST00000555759 DISC1Q9NRI5 854 aa18.91■□□□□ 0.62
SYNE3-204ENST00000555759 NDE1Q9NXR1 346 aa18.91■□□□□ 0.62
SYNE3-204ENST00000555759 JAG2Q9Y219 1238 aa18.91■□□□□ 0.62
SYNE3-204ENST00000555759 SP4Q02446 784 aa18.91■□□□□ 0.62
SYNE3-204ENST00000555759 EPM2AIP1Q7L775 607 aaPredicted RBP18.91■□□□□ 0.62
SYNE3-204ENST00000555759 CRLF3Q8IUI8 442 aa18.91■□□□□ 0.62
SYNE3-204ENST00000555759 ANLNQ9NQW6 1124 aa18.91■□□□□ 0.62
SYNE3-204ENST00000555759 USP40Q9NVE5 1235 aa18.91■□□□□ 0.62
SYNE3-204ENST00000555759 WDR19Q8NEZ3 1342 aa18.91■□□□□ 0.62
SYNE3-204ENST00000555759 CTSWP56202 376 aa18.91■□□□□ 0.62
SYNE3-204ENST00000555759 KLC1Q07866 573 aa18.91■□□□□ 0.62
SYNE3-204ENST00000555759 MAML1Q92585 1016 aa18.91■□□□□ 0.62
SYNE3-204ENST00000555759 TTC25Q96NG3 672 aa18.91■□□□□ 0.62
SYNE3-204ENST00000555759 TMOD4Q9NZQ9 345 aa18.91■□□□□ 0.62
SYNE3-204ENST00000555759 GCNT4Q9P109 453 aa18.91■□□□□ 0.62
SYNE3-204ENST00000555759 KIAA1024Q9UPX6 916 aa18.91■□□□□ 0.62
SYNE3-204ENST00000555759 GFPT2O94808 682 aa18.91■□□□□ 0.62
SYNE3-204ENST00000555759 ANO5Q75V66 913 aa18.91■□□□□ 0.62
SYNE3-204ENST00000555759 RASA4BC9J798 803 aa18.9■□□□□ 0.62
SYNE3-204ENST00000555759 H7C0C1 242 aa18.9■□□□□ 0.62
SYNE3-204ENST00000555759 RASA4O43374 803 aa18.9■□□□□ 0.62
SYNE3-204ENST00000555759 ATP5OP48047 213 aa18.9■□□□□ 0.62
SYNE3-204ENST00000555759 CCNI2Q6ZMN8 369 aaPredicted RBP18.9■□□□□ 0.62
SYNE3-204ENST00000555759 SNX24Q9Y343 169 aa18.9■□□□□ 0.62
SYNE3-204ENST00000555759 IRAK1P51617 712 aa18.9■□□□□ 0.62
SYNE3-204ENST00000555759 ART3Q13508 389 aa18.9■□□□□ 0.62
SYNE3-204ENST00000555759 BYSLQ13895 437 aaKnown RBP18.9■□□□□ 0.62
SYNE3-204ENST00000555759 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.9■□□□□ 0.624e-6■□□□□ 8
SYNE3-204ENST00000555759 UPF3AQ9H1J1 476 aaKnown RBP18.9■□□□□ 0.62
SYNE3-204ENST00000555759 OCA2Q04671 838 aa18.9■□□□□ 0.62
SYNE3-204ENST00000555759 WDR75Q8IWA0 830 aaKnown RBP18.9■□□□□ 0.62
SYNE3-204ENST00000555759 NSMCE1Q8WV22 266 aa18.9■□□□□ 0.62
SYNE3-204ENST00000555759 PARP3Q9Y6F1 533 aa18.9■□□□□ 0.62
SYNE3-204ENST00000555759 EIF4G3O43432 1585 aaKnown RBP18.9■□□□□ 0.62
SYNE3-204ENST00000555759 A0A0G2JND7 137 aa18.9■□□□□ 0.62
SYNE3-204ENST00000555759 ATP1A1P05023 1023 aaKnown RBP18.9■□□□□ 0.62
SYNE3-204ENST00000555759 HSPA8P11142 646 aaKnown RBP18.9■□□□□ 0.62
SYNE3-204ENST00000555759 MRPS25P82663 173 aaKnown RBP18.9■□□□□ 0.62
SYNE3-204ENST00000555759 ORC6Q9Y5N6 252 aa18.9■□□□□ 0.62
SYNE3-204ENST00000555759 CDC37Q16543 378 aaPredicted RBP18.9■□□□□ 0.62
SYNE3-204ENST00000555759 NBPF20Q3BBV1 942 aa18.9■□□□□ 0.62
SYNE3-204ENST00000555759 RASGRP2Q7LDG7 609 aa18.9■□□□□ 0.62
SYNE3-204ENST00000555759 TRIM50Q86XT4 487 aa18.9■□□□□ 0.62
SYNE3-204ENST00000555759 TGS1Q96RS0 853 aaKnown RBP18.9■□□□□ 0.62
SYNE3-204ENST00000555759 ARL2BPQ9Y2Y0 163 aa18.9■□□□□ 0.62
SYNE3-204ENST00000555759 BICRAQ9NZM4 1560 aa18.9■□□□□ 0.62
SYNE3-204ENST00000555759 ABCA5Q8WWZ7 1642 aa18.89■□□□□ 0.62
SYNE3-204ENST00000555759 RFX7Q2KHR2 1363 aa18.89■□□□□ 0.62
SYNE3-204ENST00000555759 PLEKHG3A1L390 1219 aa18.89■□□□□ 0.62
SYNE3-204ENST00000555759 A1BGP04217 495 aa18.89■□□□□ 0.62
SYNE3-204ENST00000555759 GSTA1P08263 222 aa18.89■□□□□ 0.62
SYNE3-204ENST00000555759 GSTA2P09210 222 aa18.89■□□□□ 0.62
SYNE3-204ENST00000555759 PCYT1AP49585 367 aa18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms