RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 SH3GL2Q99962 352 aa17.85■□□□□ 0.45
TUBB3-209ENST00000555609 TANGO6Q9C0B7 1094 aa17.85■□□□□ 0.45
TUBB3-209ENST00000555609 RNF216Q9NWF9 866 aaPredicted RBP17.85■□□□□ 0.45
TUBB3-209ENST00000555609 AIPL1Q9NZN9 384 aa17.85■□□□□ 0.45
TUBB3-209ENST00000555609 FEZ2Q9UHY8 353 aaPredicted RBP17.85■□□□□ 0.45
TUBB3-209ENST00000555609 ATF5Q9Y2D1 282 aaPredicted RBP17.85■□□□□ 0.45
TUBB3-209ENST00000555609 RRP15Q9Y3B9 282 aaKnown RBP17.85■□□□□ 0.45
TUBB3-209ENST00000555609 ATP8B3O60423 1300 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 TAF1LQ8IZX4 1826 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 AGPSO00116 658 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 CES2O00748 559 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 PHACTR2O75167 634 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 ANXA13P27216 316 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 NAB2Q15742 525 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 FAM83BQ5T0W9 1011 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 TRIM59Q8IWR1 403 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 TBC1D16Q8TBP0 767 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 MBOAT7Q96N66 472 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 NUDT12Q9BQG2 462 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 LRRC1Q9BTT6 524 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 ATP6V0A2Q9Y487 856 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 FRMD3A2A2Y4 597 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 MYO1CO00159 1063 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 NKRFO15226 690 aaKnown RBP eCLIP17.84■□□□□ 0.455e-7■□□□□ 10.7
TUBB3-209ENST00000555609 AKR1B1P15121 316 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 KLHDC7AQ5VTJ3 777 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 KCNK18Q7Z418 384 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 DEFB132Q7Z7B7 95 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 IFT20Q8IY31 132 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 SLFN12Q8IYM2 578 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 KCTD17Q8N5Z5 321 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 SMCR8Q8TEV9 937 aaPredicted RBP17.84■□□□□ 0.45
TUBB3-209ENST00000555609 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.84■□□□□ 0.45
TUBB3-209ENST00000555609 CCDC17Q96LX7 622 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 TLR10Q9BXR5 811 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 COA1Q9GZY4 146 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 FAM107BQ9H098 131 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 RASSF4Q9H2L5 321 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 PSTPIP2Q9H939 334 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 GPCPD1Q9NPB8 672 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 PCDHA2Q9Y5H9 948 aa17.84■□□□□ 0.45
TUBB3-209ENST00000555609 TNS1Q9HBL0 1735 aaKnown RBP17.83■□□□□ 0.45
TUBB3-209ENST00000555609 NOL4O94818 638 aa17.83■□□□□ 0.44
TUBB3-209ENST00000555609 MYBL2P10244 700 aa17.83■□□□□ 0.44
TUBB3-209ENST00000555609 SLC18A3Q16572 532 aa17.83■□□□□ 0.44
TUBB3-209ENST00000555609 DPP8Q6V1X1 898 aaPredicted RBP17.83■□□□□ 0.44
TUBB3-209ENST00000555609 GPR101Q96P66 508 aaPredicted RBP17.83■□□□□ 0.44
TUBB3-209ENST00000555609 SERPINB13Q9UIV8 391 aa17.83■□□□□ 0.44
TUBB3-209ENST00000555609 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.83■□□□□ 0.44
TUBB3-209ENST00000555609 BZW2Q9Y6E2 419 aaKnown RBP17.83■□□□□ 0.44
TUBB3-209ENST00000555609 GOLGA6CA6NDK9 693 aa17.82■□□□□ 0.44
TUBB3-209ENST00000555609 PLA2G4BP0C869 781 aa17.82■□□□□ 0.44
TUBB3-209ENST00000555609 GOLGA6DP0CG33 693 aa17.82■□□□□ 0.44
TUBB3-209ENST00000555609 RASSF7Q02833 373 aa17.82■□□□□ 0.44
TUBB3-209ENST00000555609 TDRD12Q587J7 1177 aaKnown RBP17.82■□□□□ 0.44
TUBB3-209ENST00000555609 HAUS3Q68CZ6 603 aa17.82■□□□□ 0.44
TUBB3-209ENST00000555609 NFRKBQ6P4R8 1299 aa17.82■□□□□ 0.44
TUBB3-209ENST00000555609 SND1Q7KZF4 910 aaKnown RBP eCLIP17.82■□□□□ 0.44
TUBB3-209ENST00000555609 AMIGO3Q86WK7 504 aa17.82■□□□□ 0.44
TUBB3-209ENST00000555609 LRRC47Q8N1G4 583 aaKnown RBP17.82■□□□□ 0.44
TUBB3-209ENST00000555609 EIF1ADQ8N9N8 165 aaKnown RBP17.82■□□□□ 0.44
TUBB3-209ENST00000555609 LSM14BQ9BX40 385 aaKnown RBP17.82■□□□□ 0.44
TUBB3-209ENST00000555609 GOLGA6AQ9NYA3 693 aa17.82■□□□□ 0.44
TUBB3-209ENST00000555609 PCDHGC5Q9Y5F6 944 aa17.82■□□□□ 0.44
TUBB3-209ENST00000555609 TBX3O15119 743 aa17.82■□□□□ 0.44
TUBB3-209ENST00000555609 CETN3O15182 167 aa17.82■□□□□ 0.44
TUBB3-209ENST00000555609 ZMYND10O75800 440 aa17.82■□□□□ 0.44
TUBB3-209ENST00000555609 GFPT1Q06210 699 aaPredicted RBP17.82■□□□□ 0.44
TUBB3-209ENST00000555609 LRRC41Q15345 812 aa17.82■□□□□ 0.44
TUBB3-209ENST00000555609 ECM1Q16610 540 aa17.82■□□□□ 0.44
TUBB3-209ENST00000555609 C8orf74Q6P047 294 aa17.82■□□□□ 0.44
TUBB3-209ENST00000555609 EHD4Q9H223 541 aa17.82■□□□□ 0.44
TUBB3-209ENST00000555609 KCTD10Q9H3F6 313 aa17.82■□□□□ 0.44
TUBB3-209ENST00000555609 KCNMB3Q9NPA1 279 aa17.82■□□□□ 0.44
TUBB3-209ENST00000555609 POLLQ9UGP5 575 aa17.82■□□□□ 0.44
TUBB3-209ENST00000555609 DMGDHQ9UI17 866 aaKnown RBP17.82■□□□□ 0.44
TUBB3-209ENST00000555609 HSF2BPO75031 334 aa17.81■□□□□ 0.44
TUBB3-209ENST00000555609 HLA-DOAP06340 250 aa17.81■□□□□ 0.44
TUBB3-209ENST00000555609 SLC1A4P43007 532 aa17.81■□□□□ 0.44
TUBB3-209ENST00000555609 AP3B2Q13367 1082 aa17.81■□□□□ 0.44
TUBB3-209ENST00000555609 IFI16Q16666 785 aaKnown RBP17.81■□□□□ 0.44
TUBB3-209ENST00000555609 FRMD5Q7Z6J6 570 aa17.81■□□□□ 0.44
TUBB3-209ENST00000555609 SP8Q8IXZ3 490 aa17.81■□□□□ 0.44
TUBB3-209ENST00000555609 MXD3Q9BW11 206 aa17.81■□□□□ 0.44
TUBB3-209ENST00000555609 PLCB1Q9NQ66 1216 aa17.81■□□□□ 0.44
TUBB3-209ENST00000555609 GDF3Q9NR23 364 aa17.81■□□□□ 0.44
TUBB3-209ENST00000555609 KLRG2A4D1S0 409 aaPredicted RBP17.8■□□□□ 0.44
TUBB3-209ENST00000555609 PPP1R11O60927 126 aaPredicted RBP17.8■□□□□ 0.44
TUBB3-209ENST00000555609 UBE2SQ16763 222 aa17.8■□□□□ 0.44
TUBB3-209ENST00000555609 C1orf131Q8NDD1 294 aaKnown RBP17.8■□□□□ 0.44
TUBB3-209ENST00000555609 DCAF4Q8WV16 495 aa17.8■□□□□ 0.44
TUBB3-209ENST00000555609 RUFY1Q96T51 708 aa17.8■□□□□ 0.44
TUBB3-209ENST00000555609 EMILIN3Q9NT22 766 aa17.8■□□□□ 0.44
TUBB3-209ENST00000555609 ATAD5Q96QE3 1844 aa17.8■□□□□ 0.44
TUBB3-209ENST00000555609 QSER1Q2KHR3 1735 aa17.8■□□□□ 0.44
TUBB3-209ENST00000555609 TLR2O60603 784 aa17.8■□□□□ 0.44
TUBB3-209ENST00000555609 APBA3O96018 575 aa17.8■□□□□ 0.44
TUBB3-209ENST00000555609 SERPINB2P05120 415 aa17.8■□□□□ 0.44
TUBB3-209ENST00000555609 POLR2FP61218 127 aaKnown RBP17.8■□□□□ 0.44
TUBB3-209ENST00000555609 PAK2Q13177 524 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms