RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 OSBPL7Q9BZF2 842 aa12.57□□□□□ -0.4
TDP1-212ENST00000555565 SENP2Q9HC62 589 aa12.57□□□□□ -0.4
TDP1-212ENST00000555565 MRPL11Q9Y3B7 192 aaKnown RBP12.57□□□□□ -0.4
TDP1-212ENST00000555565 U3KPZ7 1027 aaPredicted RBP12.57□□□□□ -0.4
TDP1-212ENST00000555565 PALM3A6NDB9 673 aaPredicted RBP12.56□□□□□ -0.4
TDP1-212ENST00000555565 E7EWF7 191 aa12.56□□□□□ -0.4
TDP1-212ENST00000555565 IFIT3O14879 490 aaKnown RBP12.56□□□□□ -0.4
TDP1-212ENST00000555565 PPP1R11O60927 126 aaPredicted RBP12.56□□□□□ -0.4
TDP1-212ENST00000555565 LINC00271P0C7V0 271 aa12.56□□□□□ -0.4
TDP1-212ENST00000555565 CASTP20810 708 aaKnown RBP12.56□□□□□ -0.4
TDP1-212ENST00000555565 GPM6BQ13491 265 aa12.56□□□□□ -0.4
TDP1-212ENST00000555565 PLEKHG4Q58EX7 1191 aa12.56□□□□□ -0.4
TDP1-212ENST00000555565 STOX1Q6ZVD7 989 aa12.56□□□□□ -0.4
TDP1-212ENST00000555565 RNF135Q8IUD6 432 aa12.56□□□□□ -0.4
TDP1-212ENST00000555565 TMEM192Q8IY95 271 aa12.56□□□□□ -0.4
TDP1-212ENST00000555565 EDAQ92838 391 aa12.56□□□□□ -0.4
TDP1-212ENST00000555565 TOP1MTQ969P6 601 aa12.56□□□□□ -0.4
TDP1-212ENST00000555565 SAMD11Q96NU1 681 aa12.56□□□□□ -0.4
TDP1-212ENST00000555565 IWS1Q96ST2 819 aa12.56□□□□□ -0.4
TDP1-212ENST00000555565 RMDN3Q96TC7 470 aa12.56□□□□□ -0.4
TDP1-212ENST00000555565 AMNQ9BXJ7 453 aa12.56□□□□□ -0.4
TDP1-212ENST00000555565 UPF3BQ9BZI7 483 aaKnown RBP12.56□□□□□ -0.4
TDP1-212ENST00000555565 NSUN3Q9H649 340 aaKnown RBP12.56□□□□□ -0.4
TDP1-212ENST00000555565 MYO7AQ13402 2215 aa12.56□□□□□ -0.4
TDP1-212ENST00000555565 ZBTB5O15062 677 aa12.55□□□□□ -0.4
TDP1-212ENST00000555565 MBTPS2O43462 519 aa12.55□□□□□ -0.4
TDP1-212ENST00000555565 F2P00734 622 aa12.55□□□□□ -0.4
TDP1-212ENST00000555565 CFBP00751 764 aa12.55□□□□□ -0.4
TDP1-212ENST00000555565 GH1P01241 217 aa12.55□□□□□ -0.4
TDP1-212ENST00000555565 PSEN2P49810 448 aa12.55□□□□□ -0.4
TDP1-212ENST00000555565 HSD17B4P51659 736 aa12.55□□□□□ -0.4
TDP1-212ENST00000555565 GHRHRQ02643 423 aa12.55□□□□□ -0.4
TDP1-212ENST00000555565 STXBP2Q15833 593 aa12.55□□□□□ -0.4
TDP1-212ENST00000555565 SEPT14Q6ZU15 432 aa12.55□□□□□ -0.4
TDP1-212ENST00000555565 CHST3Q7LGC8 479 aa12.55□□□□□ -0.4
TDP1-212ENST00000555565 MYOCDQ8IZQ8 938 aa12.55□□□□□ -0.4
TDP1-212ENST00000555565 C7orf31Q8N865 590 aa12.55□□□□□ -0.4
TDP1-212ENST00000555565 MAP4K1Q92918 833 aa12.55□□□□□ -0.4
TDP1-212ENST00000555565 EMID1Q96A84 441 aaPredicted RBP12.55□□□□□ -0.4
TDP1-212ENST00000555565 CLDND1Q9NY35 253 aa12.55□□□□□ -0.4
TDP1-212ENST00000555565 DDX41Q9UJV9 622 aaKnown RBP12.55□□□□□ -0.4
TDP1-212ENST00000555565 FAM50BQ9Y247 325 aa12.55□□□□□ -0.4
TDP1-212ENST00000555565 COL4A6Q14031 1691 aa12.54□□□□□ -0.4
TDP1-212ENST00000555565 DMDP11532 3685 aa12.54□□□□□ -0.4
TDP1-212ENST00000555565 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.54□□□□□ -0.4
TDP1-212ENST00000555565 AMHP03971 560 aa12.54□□□□□ -0.4
TDP1-212ENST00000555565 HOXD8P13378 290 aaPredicted RBP12.54□□□□□ -0.4
TDP1-212ENST00000555565 EIF2AK2P19525 551 aaKnown RBP12.54□□□□□ -0.4
TDP1-212ENST00000555565 ANTXR2P58335 489 aa12.54□□□□□ -0.4
TDP1-212ENST00000555565 HYAL1Q12794 435 aa12.54□□□□□ -0.4
TDP1-212ENST00000555565 TROAPQ12815 778 aa12.54□□□□□ -0.4
TDP1-212ENST00000555565 MFSD10Q14728 455 aa12.54□□□□□ -0.4
TDP1-212ENST00000555565 GRM4Q14833 912 aa12.54□□□□□ -0.4
TDP1-212ENST00000555565 DGKDQ16760 1214 aa12.54□□□□□ -0.4
TDP1-212ENST00000555565 KIAA0753Q2KHM9 967 aa12.54□□□□□ -0.4
TDP1-212ENST00000555565 ARHGEF16Q5VV41 709 aa12.54□□□□□ -0.4
TDP1-212ENST00000555565 RALYLQ86SE5 291 aaKnown RBP12.54□□□□□ -0.4
TDP1-212ENST00000555565 RPAINQ86UA6 219 aa12.54□□□□□ -0.4
TDP1-212ENST00000555565 NCOA7Q8NI08 942 aa12.54□□□□□ -0.4
TDP1-212ENST00000555565 ALG1Q9BT22 464 aa12.54□□□□□ -0.4
TDP1-212ENST00000555565 RIOX1Q9H6W3 641 aa12.54□□□□□ -0.4
TDP1-212ENST00000555565 PXMP2Q9NR77 195 aa12.54□□□□□ -0.4
TDP1-212ENST00000555565 PCDHA1Q9Y5I3 950 aa12.54□□□□□ -0.4
TDP1-212ENST00000555565 MYH7BA7E2Y1 1941 aa12.54□□□□□ -0.4
TDP1-212ENST00000555565 ERICH2A1L162 156 aa12.53□□□□□ -0.4
TDP1-212ENST00000555565 NCK2O43639 380 aa12.53□□□□□ -0.4
TDP1-212ENST00000555565 CYTH3O43739 400 aa12.53□□□□□ -0.4
TDP1-212ENST00000555565 EIF3JO75822 258 aaKnown RBP12.53□□□□□ -0.4
TDP1-212ENST00000555565 NR3C2P08235 984 aa12.53□□□□□ -0.4
TDP1-212ENST00000555565 GTF2F1P35269 517 aaKnown RBP eCLIP12.53□□□□□ -0.4
TDP1-212ENST00000555565 PTPN5P54829 565 aa12.53□□□□□ -0.4
TDP1-212ENST00000555565 WTAPQ15007 396 aa12.53□□□□□ -0.4
TDP1-212ENST00000555565 TRIM67Q6ZTA4 783 aa12.53□□□□□ -0.4
TDP1-212ENST00000555565 EP400NLQ6ZTU2 488 aa12.53□□□□□ -0.4
TDP1-212ENST00000555565 SERINC5Q86VE9 423 aa12.53□□□□□ -0.4
TDP1-212ENST00000555565 HOMER1Q86YM7 354 aa12.53□□□□□ -0.4
TDP1-212ENST00000555565 MB21D2Q8IYB1 491 aaPredicted RBP12.53□□□□□ -0.4
TDP1-212ENST00000555565 IGDCC4Q8TDY8 1250 aa12.53□□□□□ -0.4
TDP1-212ENST00000555565 PIGSQ96S52 555 aa12.53□□□□□ -0.4
TDP1-212ENST00000555565 RBM8AQ9Y5S9 174 aaKnown RBP12.53□□□□□ -0.4
TDP1-212ENST00000555565 MICAL3Q7RTP6 2002 aa12.53□□□□□ -0.4
TDP1-212ENST00000555565 EMSYQ7Z589 1322 aa12.53□□□□□ -0.4
TDP1-212ENST00000555565 ZFHX2Q9C0A1 2572 aaPredicted RBP12.52□□□□□ -0.4
TDP1-212ENST00000555565 DCHS1Q96JQ0 3298 aa12.52□□□□□ -0.41
TDP1-212ENST00000555565 TMEM221A6NGB7 291 aa12.52□□□□□ -0.41
TDP1-212ENST00000555565 RSPH10B2B2RC85 870 aa12.52□□□□□ -0.41
TDP1-212ENST00000555565 C5orf67F2Z3F1 127 aa12.52□□□□□ -0.41
TDP1-212ENST00000555565 M0R296 226 aa12.52□□□□□ -0.41
TDP1-212ENST00000555565 GRM6O15303 877 aa12.52□□□□□ -0.41
TDP1-212ENST00000555565 TBX10O75333 385 aa12.52□□□□□ -0.41
TDP1-212ENST00000555565 RGS20O76081 388 aa12.52□□□□□ -0.41
TDP1-212ENST00000555565 RSPH10BP0C881 870 aa12.52□□□□□ -0.41
TDP1-212ENST00000555565 ZNF286BP0CG31 522 aa12.52□□□□□ -0.41
TDP1-212ENST00000555565 HOXA13P31271 388 aaPredicted RBP12.52□□□□□ -0.41
TDP1-212ENST00000555565 HOXC8P31273 242 aa12.52□□□□□ -0.41
TDP1-212ENST00000555565 SART3Q15020 963 aaKnown RBP12.52□□□□□ -0.41
TDP1-212ENST00000555565 CLUL1Q15846 466 aa12.52□□□□□ -0.41
TDP1-212ENST00000555565 PDCD2LQ9BRP1 358 aa12.52□□□□□ -0.41
TDP1-212ENST00000555565 MAP3K20Q9NYL2 800 aaKnown RBP12.52□□□□□ -0.41
TDP1-212ENST00000555565 ATG2AQ2TAZ0 1938 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms