RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ARP10275 920 aa15.64■□□□□ 0.09
SNX6-203ENST00000555416 CSF2RAP15509 400 aa15.64■□□□□ 0.09
SNX6-203ENST00000555416 PSEN2P49810 448 aa15.64■□□□□ 0.09
SNX6-203ENST00000555416 NEK4P51957 841 aa15.64■□□□□ 0.09
SNX6-203ENST00000555416 AKAP17AQ02040 695 aaKnown RBP15.64■□□□□ 0.09
SNX6-203ENST00000555416 SSRP1Q08945 709 aaKnown RBP15.64■□□□□ 0.09
SNX6-203ENST00000555416 ST3GAL1Q11201 340 aa15.64■□□□□ 0.09
SNX6-203ENST00000555416 ME3Q16798 604 aa15.64■□□□□ 0.09
SNX6-203ENST00000555416 NFRKBQ6P4R8 1299 aa15.64■□□□□ 0.09
SNX6-203ENST00000555416 METTL7BQ6UX53 244 aa15.64■□□□□ 0.09
SNX6-203ENST00000555416 TRIM50Q86XT4 487 aa15.64■□□□□ 0.09
SNX6-203ENST00000555416 VWCEQ96DN2 955 aa15.64■□□□□ 0.09
SNX6-203ENST00000555416 GPR20Q99678 358 aa15.64■□□□□ 0.09
SNX6-203ENST00000555416 SENP7Q9BQF6 1050 aa15.64■□□□□ 0.09
SNX6-203ENST00000555416 MXRA8Q9BRK3 442 aa15.64■□□□□ 0.09
SNX6-203ENST00000555416 WNT8AQ9H1J5 351 aa15.64■□□□□ 0.09
SNX6-203ENST00000555416 SLKQ9H2G2 1235 aaPredicted RBP15.64■□□□□ 0.09
SNX6-203ENST00000555416 HIPK3Q9H422 1215 aa15.64■□□□□ 0.09
SNX6-203ENST00000555416 HDAC6Q9UBN7 1215 aa15.64■□□□□ 0.09
SNX6-203ENST00000555416 CPLX1O14810 134 aa15.63■□□□□ 0.09
SNX6-203ENST00000555416 CCL23P55773 120 aa15.63■□□□□ 0.09
SNX6-203ENST00000555416 ARHGAP4P98171 946 aa15.63■□□□□ 0.09
SNX6-203ENST00000555416 ZNF200P98182 395 aaPredicted RBP15.63■□□□□ 0.09
SNX6-203ENST00000555416 FPGSQ05932 587 aa15.63■□□□□ 0.09
SNX6-203ENST00000555416 AP3B2Q13367 1082 aa15.63■□□□□ 0.09
SNX6-203ENST00000555416 MTMR1Q13613 665 aa15.63■□□□□ 0.09
SNX6-203ENST00000555416 NEDD9Q14511 834 aa15.63■□□□□ 0.09
SNX6-203ENST00000555416 MFSD10Q14728 455 aa15.63■□□□□ 0.09
SNX6-203ENST00000555416 NPY5RQ15761 445 aa15.63■□□□□ 0.09
SNX6-203ENST00000555416 KIAA0753Q2KHM9 967 aa15.63■□□□□ 0.09
SNX6-203ENST00000555416 MFSD5Q6N075 450 aa15.63■□□□□ 0.09
SNX6-203ENST00000555416 NLRX1Q86UT6 975 aa15.63■□□□□ 0.09
SNX6-203ENST00000555416 UIMC1Q96RL1 719 aa15.63■□□□□ 0.09
SNX6-203ENST00000555416 SEZ6LQ9BYH1 1024 aa15.63■□□□□ 0.09
SNX6-203ENST00000555416 C6orf50Q9HD87 102 aa15.63■□□□□ 0.09
SNX6-203ENST00000555416 GJB4Q9NTQ9 266 aa15.63■□□□□ 0.09
SNX6-203ENST00000555416 FAM86B1E9PN63 330 aa15.62■□□□□ 0.09
SNX6-203ENST00000555416 LGALS2P05162 132 aa15.62■□□□□ 0.09
SNX6-203ENST00000555416 FAM86B2P0C5J1 330 aa15.62■□□□□ 0.09
SNX6-203ENST00000555416 ACRP10323 421 aa15.62■□□□□ 0.09
SNX6-203ENST00000555416 TEX2Q8IWB9 1127 aa15.62■□□□□ 0.09
SNX6-203ENST00000555416 TRIM22Q8IYM9 498 aa15.62■□□□□ 0.09
SNX6-203ENST00000555416 REXO1Q8N1G1 1221 aaKnown RBP15.62■□□□□ 0.09
SNX6-203ENST00000555416 DHX38Q92620 1227 aaKnown RBP15.62■□□□□ 0.09
SNX6-203ENST00000555416 SCLYQ96I15 445 aa15.62■□□□□ 0.09
SNX6-203ENST00000555416 GLT8D2Q9H1C3 349 aa15.62■□□□□ 0.09
SNX6-203ENST00000555416 KCNH7Q9NS40 1196 aa15.62■□□□□ 0.09
SNX6-203ENST00000555416 IGLV3-22A0A075B6J6 115 aa15.61■□□□□ 0.09
SNX6-203ENST00000555416 GSTTP1A0A1W2PQM5 241 aa15.61■□□□□ 0.09
SNX6-203ENST00000555416 MEIS1O00470 390 aa15.61■□□□□ 0.09
SNX6-203ENST00000555416 DEXIO95424 95 aa15.61■□□□□ 0.09
SNX6-203ENST00000555416 PTPN11Q06124 597 aaPredicted RBP15.61■□□□□ 0.09
SNX6-203ENST00000555416 ITGB3BPQ13352 177 aaPredicted RBP15.61■□□□□ 0.09
SNX6-203ENST00000555416 PTGISQ16647 500 aa15.61■□□□□ 0.09
SNX6-203ENST00000555416 LRIT3Q3SXY7 679 aa15.61■□□□□ 0.09
SNX6-203ENST00000555416 CEP55Q53EZ4 464 aa15.61■□□□□ 0.09
SNX6-203ENST00000555416 UTP14CQ5TAP6 766 aaKnown RBP15.61■□□□□ 0.09
SNX6-203ENST00000555416 SESTD1Q86VW0 696 aa15.61■□□□□ 0.09
SNX6-203ENST00000555416 CCDC12Q8WUD4 166 aaPredicted RBP15.61■□□□□ 0.09
SNX6-203ENST00000555416 WNT8BQ93098 351 aa15.61■□□□□ 0.09
SNX6-203ENST00000555416 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.61■□□□□ 0.097e-7■■■□□ 15.3
SNX6-203ENST00000555416 EHMT1Q9H9B1 1298 aa15.61■□□□□ 0.09
SNX6-203ENST00000555416 SH3GLB2Q9NR46 395 aa15.61■□□□□ 0.09
SNX6-203ENST00000555416 GTF2IRD1Q9UHL9 959 aa15.61■□□□□ 0.09
SNX6-203ENST00000555416 H3BRB1 525 aa15.6■□□□□ 0.09
SNX6-203ENST00000555416 M0R2N6 131 aa15.6■□□□□ 0.09
SNX6-203ENST00000555416 NOP56O00567 594 aaKnown RBP15.6■□□□□ 0.09
SNX6-203ENST00000555416 SLC34A2O95436 690 aa15.6■□□□□ 0.09
SNX6-203ENST00000555416 CYP3A4P08684 503 aa15.6■□□□□ 0.09
SNX6-203ENST00000555416 SUPT20HL2P0C7V6 817 aa15.6■□□□□ 0.09
SNX6-203ENST00000555416 FDPSP14324 419 aaKnown RBP15.6■□□□□ 0.09
SNX6-203ENST00000555416 GNA11P29992 359 aa15.6■□□□□ 0.09
SNX6-203ENST00000555416 NLRP5P59047 1200 aa15.6■□□□□ 0.09
SNX6-203ENST00000555416 ANKRD1Q15327 319 aa15.6■□□□□ 0.09
SNX6-203ENST00000555416 TMEM240Q5SV17 173 aa15.6■□□□□ 0.09
SNX6-203ENST00000555416 C7orf31Q8N865 590 aa15.6■□□□□ 0.09
SNX6-203ENST00000555416 CCDC148Q8NFR7 591 aa15.6■□□□□ 0.09
SNX6-203ENST00000555416 TUT1Q9H6E5 874 aaKnown RBP15.6■□□□□ 0.09
SNX6-203ENST00000555416 AGO4Q9HCK5 861 aaKnown RBP15.6■□□□□ 0.09
SNX6-203ENST00000555416 KCNJ14Q9UNX9 436 aa15.6■□□□□ 0.09
SNX6-203ENST00000555416 TRIP12Q14669 1992 aaPredicted RBP15.6■□□□□ 0.09
SNX6-203ENST00000555416 EIF5BO60841 1220 aaKnown RBP15.59■□□□□ 0.09
SNX6-203ENST00000555416 TCF7P36402 384 aaPredicted RBP15.59■□□□□ 0.09
SNX6-203ENST00000555416 C1QBPQ07021 282 aaKnown RBP15.59■□□□□ 0.09
SNX6-203ENST00000555416 PPIGQ13427 754 aaKnown RBP eCLIP15.59■□□□□ 0.09
SNX6-203ENST00000555416 CPLX2Q6PUV4 134 aaKnown RBP15.59■□□□□ 0.09
SNX6-203ENST00000555416 TMEM199Q8N511 208 aa15.59■□□□□ 0.09
SNX6-203ENST00000555416 GTF3C6Q969F1 213 aa15.59■□□□□ 0.09
SNX6-203ENST00000555416 CDHR1Q96JP9 859 aa15.59■□□□□ 0.09
SNX6-203ENST00000555416 PCYT2Q99447 389 aa15.59■□□□□ 0.09
SNX6-203ENST00000555416 KATNAL1Q9BW62 490 aa15.59■□□□□ 0.09
SNX6-203ENST00000555416 PCDHA4Q9UN74 947 aa15.59■□□□□ 0.09
SNX6-203ENST00000555416 SCN5AQ14524 2016 aa15.59■□□□□ 0.09
SNX6-203ENST00000555416 MAFGO15525 162 aa15.58■□□□□ 0.08
SNX6-203ENST00000555416 DHX15O43143 795 aaKnown RBP15.58■□□□□ 0.08
SNX6-203ENST00000555416 JAK2O60674 1132 aa15.58■□□□□ 0.08
SNX6-203ENST00000555416 CCNE2O96020 404 aa15.58■□□□□ 0.08
SNX6-203ENST00000555416 SMIM10L2AP0DMW4 78 aa15.58■□□□□ 0.08
SNX6-203ENST00000555416 SMIM10L2BP0DMW5 78 aa15.58■□□□□ 0.08
SNX6-203ENST00000555416 HOXC8P31273 242 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms