RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 RMDN3Q96TC7 470 aa19.55■□□□□ 0.72
SHOX-204ENST00000554971 TINF2Q9BSI4 451 aa19.55■□□□□ 0.72
SHOX-204ENST00000554971 TMEM260Q9NX78 707 aa19.55■□□□□ 0.72
SHOX-204ENST00000554971 FRMPD4Q14CM0 1322 aa19.55■□□□□ 0.72
SHOX-204ENST00000554971 SKILP12757 684 aa19.55■□□□□ 0.72
SHOX-204ENST00000554971 MRPL12P52815 198 aaKnown RBP19.55■□□□□ 0.72
SHOX-204ENST00000554971 CT47A1Q5JQC4 288 aaPredicted RBP19.55■□□□□ 0.72
SHOX-204ENST00000554971 DNERQ8NFT8 737 aa19.55■□□□□ 0.72
SHOX-204ENST00000554971 IL31RAQ8NI17 732 aa19.55■□□□□ 0.72
SHOX-204ENST00000554971 MCOLN1Q9GZU1 580 aa19.55■□□□□ 0.72
SHOX-204ENST00000554971 PXMP2Q9NR77 195 aa19.55■□□□□ 0.72
SHOX-204ENST00000554971 BIN2Q9UBW5 565 aaPredicted RBP19.55■□□□□ 0.72
SHOX-204ENST00000554971 SNAI1O95863 264 aaPredicted RBP19.54■□□□□ 0.72
SHOX-204ENST00000554971 EDNRBP24530 442 aa19.54■□□□□ 0.72
SHOX-204ENST00000554971 GRK4P32298 578 aa19.54■□□□□ 0.72
SHOX-204ENST00000554971 NLRP5P59047 1200 aa19.54■□□□□ 0.72
SHOX-204ENST00000554971 PKN2Q16513 984 aaKnown RBP19.54■□□□□ 0.72
SHOX-204ENST00000554971 TRIML1Q8N9V2 468 aa19.54■□□□□ 0.72
SHOX-204ENST00000554971 CNNM3Q8NE01 707 aa19.54■□□□□ 0.72
SHOX-204ENST00000554971 OXER1Q8TDS5 423 aa19.54■□□□□ 0.72
SHOX-204ENST00000554971 C6orf50Q9HD87 102 aa19.54■□□□□ 0.72
SHOX-204ENST00000554971 SLC5A4Q9NY91 659 aa19.54■□□□□ 0.72
SHOX-204ENST00000554971 PCDHA4Q9UN74 947 aa19.54■□□□□ 0.72
SHOX-204ENST00000554971 SRPRBQ9Y5M8 271 aaKnown RBP19.54■□□□□ 0.72
SHOX-204ENST00000554971 RPTORQ8N122 1335 aa19.53■□□□□ 0.72
SHOX-204ENST00000554971 CTIFO43310 598 aaKnown RBP19.53■□□□□ 0.72
SHOX-204ENST00000554971 EIF2AK2P19525 551 aaKnown RBP19.53■□□□□ 0.72
SHOX-204ENST00000554971 TOB1P50616 345 aaPredicted RBP19.53■□□□□ 0.72
SHOX-204ENST00000554971 UBXN2AP68543 259 aa19.53■□□□□ 0.72
SHOX-204ENST00000554971 MYL5Q02045 173 aa19.53■□□□□ 0.72
SHOX-204ENST00000554971 NT5DC1Q5TFE4 455 aa19.53■□□□□ 0.72
SHOX-204ENST00000554971 ARMCX2Q7L311 632 aa19.53■□□□□ 0.72
SHOX-204ENST00000554971 FAM177A1Q8N128 213 aaPredicted RBP19.53■□□□□ 0.72
SHOX-204ENST00000554971 DAGLBQ8NCG7 672 aa19.53■□□□□ 0.72
SHOX-204ENST00000554971 SLAIN1Q8ND83 568 aa19.53■□□□□ 0.72
SHOX-204ENST00000554971 MORC4Q8TE76 937 aa19.53■□□□□ 0.72
SHOX-204ENST00000554971 KATNBL1Q9H079 304 aa19.53■□□□□ 0.72
SHOX-204ENST00000554971 DACH1Q9UI36 760 aa19.53■□□□□ 0.72
SHOX-204ENST00000554971 TNNT1P13805 278 aa19.53■□□□□ 0.72
SHOX-204ENST00000554971 GNA11P29992 359 aa19.53■□□□□ 0.72
SHOX-204ENST00000554971 TPD52L1Q16890 204 aaPredicted RBP19.53■□□□□ 0.72
SHOX-204ENST00000554971 JAKMIP3Q5VZ66 844 aa19.53■□□□□ 0.72
SHOX-204ENST00000554971 REXO1Q8N1G1 1221 aaKnown RBP19.53■□□□□ 0.72
SHOX-204ENST00000554971 ERCC4Q92889 916 aaPredicted RBP19.53■□□□□ 0.72
SHOX-204ENST00000554971 PDCD2LQ9BRP1 358 aa19.53■□□□□ 0.72
SHOX-204ENST00000554971 ADD3Q9UEY8 706 aaKnown RBP19.53■□□□□ 0.72
SHOX-204ENST00000554971 FBXO2Q9UK22 296 aaPredicted RBP19.53■□□□□ 0.72
SHOX-204ENST00000554971 SYNGAP1Q96PV0 1343 aa19.52■□□□□ 0.72
SHOX-204ENST00000554971 HMGCRP04035 888 aa19.52■□□□□ 0.72
SHOX-204ENST00000554971 MDM2Q00987 491 aaPredicted RBP19.52■□□□□ 0.72
SHOX-204ENST00000554971 PGM5Q15124 567 aa19.52■□□□□ 0.72
SHOX-204ENST00000554971 MAP3K21Q5TCX8 1036 aa19.52■□□□□ 0.72
SHOX-204ENST00000554971 NSUN6Q8TEA1 469 aaKnown RBP19.52■□□□□ 0.72
SHOX-204ENST00000554971 PCDHA6Q9UN73 950 aa19.52■□□□□ 0.72
SHOX-204ENST00000554971 PCDHA8Q9Y5H6 950 aa19.52■□□□□ 0.72
SHOX-204ENST00000554971 CCZ1BP86790 482 aa19.51■□□□□ 0.71
SHOX-204ENST00000554971 CCZ1P86791 482 aaPredicted RBP19.51■□□□□ 0.71
SHOX-204ENST00000554971 CACNB2Q08289 660 aaPredicted RBP19.51■□□□□ 0.71
SHOX-204ENST00000554971 NR5A1Q13285 461 aa19.51■□□□□ 0.71
SHOX-204ENST00000554971 LONRF3Q496Y0 759 aa19.51■□□□□ 0.71
SHOX-204ENST00000554971 SLC9C1Q4G0N8 1177 aa19.51■□□□□ 0.71
SHOX-204ENST00000554971 PRAMEF19Q5SWL8 479 aa19.51■□□□□ 0.71
SHOX-204ENST00000554971 FILIP1Q7Z7B0 1213 aa19.51■□□□□ 0.71
SHOX-204ENST00000554971 TEX2Q8IWB9 1127 aa19.51■□□□□ 0.71
SHOX-204ENST00000554971 BLIDQ8IZY5 108 aa19.51■□□□□ 0.71
SHOX-204ENST00000554971 MLKLQ8NB16 471 aa19.51■□□□□ 0.71
SHOX-204ENST00000554971 TRPV1Q8NER1 839 aa19.51■□□□□ 0.71
SHOX-204ENST00000554971 XPO4Q9C0E2 1151 aaKnown RBP19.51■□□□□ 0.71
SHOX-204ENST00000554971 GLT8D2Q9H1C3 349 aa19.51■□□□□ 0.71
SHOX-204ENST00000554971 BRMS1Q9HCU9 246 aa19.51■□□□□ 0.71
SHOX-204ENST00000554971 EDIL3O43854 480 aa19.51■□□□□ 0.71
SHOX-204ENST00000554971 INHAP05111 366 aa19.51■□□□□ 0.71
SHOX-204ENST00000554971 RBM10P98175 930 aaKnown RBP19.51■□□□□ 0.71
SHOX-204ENST00000554971 EARS2Q5JPH6 523 aaKnown RBP19.51■□□□□ 0.71
SHOX-204ENST00000554971 ARHGEF16Q5VV41 709 aa19.51■□□□□ 0.71
SHOX-204ENST00000554971 MSL3Q8N5Y2 521 aaKnown RBP19.51■□□□□ 0.71
SHOX-204ENST00000554971 CRYGNQ8WXF5 182 aa19.51■□□□□ 0.71
SHOX-204ENST00000554971 TNFRSF25Q93038 417 aa19.51■□□□□ 0.71
SHOX-204ENST00000554971 CLIC6Q96NY7 704 aa19.51■□□□□ 0.71
SHOX-204ENST00000554971 ANO3Q9BYT9 981 aa19.51■□□□□ 0.71
SHOX-204ENST00000554971 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.51■□□□□ 0.71
SHOX-204ENST00000554971 IFNKQ9P0W0 207 aa19.51■□□□□ 0.71
SHOX-204ENST00000554971 SPDYE3A6NKU9 549 aa19.5■□□□□ 0.71
SHOX-204ENST00000554971 BIN1O00499 593 aa19.5■□□□□ 0.71
SHOX-204ENST00000554971 RIOK3O14730 519 aaKnown RBP19.5■□□□□ 0.71
SHOX-204ENST00000554971 SMC2O95347 1197 aa19.5■□□□□ 0.71
SHOX-204ENST00000554971 NR3C2P08235 984 aa19.5■□□□□ 0.71
SHOX-204ENST00000554971 PRKAR2AP13861 404 aaKnown RBP19.5■□□□□ 0.71
SHOX-204ENST00000554971 MRPS9P82933 396 aaKnown RBP19.5■□□□□ 0.71
SHOX-204ENST00000554971 FANCCQ00597 558 aa19.5■□□□□ 0.71
SHOX-204ENST00000554971 GALNT17Q6IS24 598 aa19.5■□□□□ 0.71
SHOX-204ENST00000554971 TRMT44Q8IYL2 757 aaKnown RBP19.5■□□□□ 0.71
SHOX-204ENST00000554971 ZFP91Q96JP5 570 aaPredicted RBP19.5■□□□□ 0.71
SHOX-204ENST00000554971 DOCK5Q9H7D0 1870 aa19.5■□□□□ 0.71
SHOX-204ENST00000554971 FRMPD3Q5JV73 1810 aa19.49■□□□□ 0.71
SHOX-204ENST00000554971 A0A087WWV3 80 aa19.49■□□□□ 0.71
SHOX-204ENST00000554971 CCP110O43303 1012 aa19.49■□□□□ 0.71
SHOX-204ENST00000554971 RGS20O76081 388 aa19.49■□□□□ 0.71
SHOX-204ENST00000554971 CYBAP13498 195 aa19.49■□□□□ 0.71
SHOX-204ENST00000554971 KRT2P35908 639 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms