RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 BRF1Q92994 677 aa14.2□□□□□ -0.14
SHMT2-214ENST00000554604 INPP4AQ96PE3 977 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-214ENST00000554604 ALG1Q9BT22 464 aa14.2□□□□□ -0.14
SHMT2-214ENST00000554604 MTIF3Q9H2K0 278 aaKnown RBP14.2□□□□□ -0.14
SHMT2-214ENST00000554604 V9GY48 417 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-214ENST00000554604 COL6A3P12111 3177 aa14.2□□□□□ -0.14
SHMT2-214ENST00000554604 TANC1Q9C0D5 1861 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-214ENST00000554604 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-214ENST00000554604 FIBPO43427 364 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 FGBP02675 491 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 PSEN2P49810 448 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 METAP2P50579 478 aaKnown RBP eCLIP14.19□□□□□ -0.141e-6■■■□□ 18.9
SHMT2-214ENST00000554604 SP2Q02086 613 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 BFSP2Q13515 415 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 NEDD9Q14511 834 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 MFSD10Q14728 455 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 PTGISQ16647 500 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 UBE2SQ16763 222 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 KIAA0753Q2KHM9 967 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 KLHL40Q2TBA0 621 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 HSDL1Q3SXM5 330 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 NLRX1Q86UT6 975 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 RETREG2Q8NC44 543 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 TET1Q8NFU7 2136 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 KAT2BQ92831 832 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 SCLYQ96I15 445 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 FAM161BQ96MY7 647 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 LARP6Q9BRS8 491 aaKnown RBP14.19□□□□□ -0.14
SHMT2-214ENST00000554604 WNT8AQ9H1J5 351 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 EHMT1Q9H9B1 1298 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 LMBRD1Q9NUN5 540 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 MTMR10Q9NXD2 777 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 MYH15Q9Y2K3 1946 aa14.19□□□□□ -0.14
SHMT2-214ENST00000554604 GBF1Q92538 1859 aa14.18□□□□□ -0.14
SHMT2-214ENST00000554604 SPATA31C2B4DYI2 1134 aa14.18□□□□□ -0.14
SHMT2-214ENST00000554604 F2P00734 622 aa14.18□□□□□ -0.14
SHMT2-214ENST00000554604 CDC27P30260 824 aa14.18□□□□□ -0.14
SHMT2-214ENST00000554604 ICAM3P32942 547 aa14.18□□□□□ -0.14
SHMT2-214ENST00000554604 WWC2Q6AWC2 1192 aa14.18□□□□□ -0.14
SHMT2-214ENST00000554604 CYFIP1Q7L576 1253 aa14.18□□□□□ -0.14
SHMT2-214ENST00000554604 OTOP2Q7RTS6 562 aa14.18□□□□□ -0.14
SHMT2-214ENST00000554604 SESTD1Q86VW0 696 aa14.18□□□□□ -0.14
SHMT2-214ENST00000554604 FBXL16Q8N461 479 aa14.18□□□□□ -0.14
SHMT2-214ENST00000554604 CCDC155Q8N6L0 562 aa14.18□□□□□ -0.14
SHMT2-214ENST00000554604 AGXT2Q9BYV1 514 aa14.18□□□□□ -0.14
SHMT2-214ENST00000554604 hCG_1984214I3L0E3 225 aa14.17□□□□□ -0.14
SHMT2-214ENST00000554604 PITPNM1O00562 1244 aa14.17□□□□□ -0.14
SHMT2-214ENST00000554604 STX6O43752 255 aa14.17□□□□□ -0.14
SHMT2-214ENST00000554604 ZSCAN22P10073 491 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-214ENST00000554604 HOXD8P13378 290 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-214ENST00000554604 SYT1P21579 422 aa14.17□□□□□ -0.14
SHMT2-214ENST00000554604 GJB2P29033 226 aa14.17□□□□□ -0.14
SHMT2-214ENST00000554604 ADD1P35611 737 aaKnown RBP14.17□□□□□ -0.14
SHMT2-214ENST00000554604 ADCY7P51828 1080 aa14.17□□□□□ -0.14
SHMT2-214ENST00000554604 FUT2Q10981 343 aa14.17□□□□□ -0.14
SHMT2-214ENST00000554604 GDF6Q6KF10 455 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-214ENST00000554604 PPP1R18Q6NYC8 613 aa14.17□□□□□ -0.14
SHMT2-214ENST00000554604 METTL7BQ6UX53 244 aa14.17□□□□□ -0.14
SHMT2-214ENST00000554604 DEFB128Q7Z7B8 93 aa14.17□□□□□ -0.14
SHMT2-214ENST00000554604 ZNF713Q8N859 430 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-214ENST00000554604 GIMAP8Q8ND71 665 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-214ENST00000554604 HERVK_113Q902F9 699 aa14.17□□□□□ -0.14
SHMT2-214ENST00000554604 CDHR1Q96JP9 859 aa14.17□□□□□ -0.14
SHMT2-214ENST00000554604 RIC8AQ9NPQ8 531 aa14.17□□□□□ -0.14
SHMT2-214ENST00000554604 FAM217BQ9NTX9 383 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-214ENST00000554604 HDAC6Q9UBN7 1215 aa14.17□□□□□ -0.14
SHMT2-214ENST00000554604 GTF2IRD1Q9UHL9 959 aa14.17□□□□□ -0.14
SHMT2-214ENST00000554604 PCDHA6Q9UN73 950 aa14.17□□□□□ -0.14
SHMT2-214ENST00000554604 PCDHA8Q9Y5H6 950 aa14.17□□□□□ -0.14
SHMT2-214ENST00000554604 SMCO2A6NFE2 343 aa14.16□□□□□ -0.14
SHMT2-214ENST00000554604 H3BRB1 525 aa14.16□□□□□ -0.14
SHMT2-214ENST00000554604 PFKMP08237 780 aa14.16□□□□□ -0.14
SHMT2-214ENST00000554604 PDCP20941 246 aa14.16□□□□□ -0.14
SHMT2-214ENST00000554604 AKAP17AQ02040 695 aaKnown RBP14.16□□□□□ -0.14
SHMT2-214ENST00000554604 SP4Q02446 784 aa14.16□□□□□ -0.14
SHMT2-214ENST00000554604 SEMA3FQ13275 785 aa14.16□□□□□ -0.14
SHMT2-214ENST00000554604 L1TD1Q5T7N2 865 aaKnown RBP14.16□□□□□ -0.14
SHMT2-214ENST00000554604 TEX2Q8IWB9 1127 aa14.16□□□□□ -0.14
SHMT2-214ENST00000554604 CAGE1Q8TC20 777 aa14.16□□□□□ -0.14
SHMT2-214ENST00000554604 GPRASP2Q96D09 838 aa14.16□□□□□ -0.14
SHMT2-214ENST00000554604 SENP7Q9BQF6 1050 aa14.16□□□□□ -0.14
SHMT2-214ENST00000554604 GLT8D2Q9H1C3 349 aa14.16□□□□□ -0.14
SHMT2-214ENST00000554604 TUT1Q9H6E5 874 aaKnown RBP14.16□□□□□ -0.14
SHMT2-214ENST00000554604 BCAS3Q9H6U6 928 aa14.16□□□□□ -0.14
SHMT2-214ENST00000554604 BARHL2Q9NY43 387 aa14.16□□□□□ -0.14
SHMT2-214ENST00000554604 ATP6V1DQ9Y5K8 247 aa14.16□□□□□ -0.14
SHMT2-214ENST00000554604 ZBBXA8MT70 800 aa14.15□□□□□ -0.14
SHMT2-214ENST00000554604 STXBP3O00186 592 aa14.15□□□□□ -0.14
SHMT2-214ENST00000554604 HAS3O00219 553 aa14.15□□□□□ -0.14
SHMT2-214ENST00000554604 FOSP01100 380 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-214ENST00000554604 LGALS2P05162 132 aa14.15□□□□□ -0.14
SHMT2-214ENST00000554604 IQCF3P0C7M6 154 aa14.15□□□□□ -0.14
SHMT2-214ENST00000554604 ACTN1P12814 892 aa14.15□□□□□ -0.14
SHMT2-214ENST00000554604 DNAJB2P25686 324 aa14.15□□□□□ -0.14
SHMT2-214ENST00000554604 RFC2P35250 354 aa14.15□□□□□ -0.14
SHMT2-214ENST00000554604 MTMR1Q13613 665 aa14.15□□□□□ -0.14
SHMT2-214ENST00000554604 RASIP1Q5U651 963 aa14.15□□□□□ -0.14
SHMT2-214ENST00000554604 NECAB1Q8N987 351 aa14.15□□□□□ -0.14
SHMT2-214ENST00000554604 GTF3C6Q969F1 213 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms