RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 UTP14CQ5TAP6 766 aaKnown RBP12.19□□□□□ -0.46
SHMT2-213ENST00000554600 METTL7BQ6UX53 244 aa12.19□□□□□ -0.46
SHMT2-213ENST00000554600 CCDC148Q8NFR7 591 aa12.19□□□□□ -0.46
SHMT2-213ENST00000554600 KAT2BQ92831 832 aa12.19□□□□□ -0.46
SHMT2-213ENST00000554600 ZNF274Q96GC6 653 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-213ENST00000554600 CDHR1Q96JP9 859 aa12.19□□□□□ -0.46
SHMT2-213ENST00000554600 RNF26Q9BY78 433 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-213ENST00000554600 BCAS3Q9H6U6 928 aa12.19□□□□□ -0.46
SHMT2-213ENST00000554600 LAMA3Q16787 3333 aa12.19□□□□□ -0.46
SHMT2-213ENST00000554600 GNA11P29992 359 aa12.18□□□□□ -0.46
SHMT2-213ENST00000554600 PKN1Q16512 942 aa12.18□□□□□ -0.46
SHMT2-213ENST00000554600 GDF6Q6KF10 455 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-213ENST00000554600 REXO1Q8N1G1 1221 aaKnown RBP12.18□□□□□ -0.46
SHMT2-213ENST00000554600 RETREG2Q8NC44 543 aa12.18□□□□□ -0.46
SHMT2-213ENST00000554600 GIMAP8Q8ND71 665 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-213ENST00000554600 SCLYQ96I15 445 aa12.18□□□□□ -0.46
SHMT2-213ENST00000554600 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.18□□□□□ -0.468e-8■□□□□ 11.3
SHMT2-213ENST00000554600 SLKQ9H2G2 1235 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-213ENST00000554600 VPS54Q9P1Q0 977 aa12.18□□□□□ -0.46
SHMT2-213ENST00000554600 HDAC6Q9UBN7 1215 aa12.18□□□□□ -0.46
SHMT2-213ENST00000554600 UBIAD1Q9Y5Z9 338 aa12.18□□□□□ -0.46
SHMT2-213ENST00000554600 ESYT2A0FGR8 921 aa12.17□□□□□ -0.46
SHMT2-213ENST00000554600 SEC24BO95487 1268 aa12.17□□□□□ -0.46
SHMT2-213ENST00000554600 F2P00734 622 aa12.17□□□□□ -0.46
SHMT2-213ENST00000554600 LGALS2P05162 132 aa12.17□□□□□ -0.46
SHMT2-213ENST00000554600 ITGB5P18084 799 aa12.17□□□□□ -0.46
SHMT2-213ENST00000554600 AK2P54819 239 aa12.17□□□□□ -0.46
SHMT2-213ENST00000554600 NLRP5P59047 1200 aa12.17□□□□□ -0.46
SHMT2-213ENST00000554600 ANKRD1Q15327 319 aa12.17□□□□□ -0.46
SHMT2-213ENST00000554600 PSRC1Q6PGN9 363 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-213ENST00000554600 DEFB128Q7Z7B8 93 aa12.17□□□□□ -0.46
SHMT2-213ENST00000554600 TEX2Q8IWB9 1127 aa12.17□□□□□ -0.46
SHMT2-213ENST00000554600 CCDC155Q8N6L0 562 aa12.17□□□□□ -0.46
SHMT2-213ENST00000554600 BICD2Q8TD16 824 aa12.17□□□□□ -0.46
SHMT2-213ENST00000554600 SENP7Q9BQF6 1050 aa12.17□□□□□ -0.46
SHMT2-213ENST00000554600 MXRA8Q9BRK3 442 aa12.17□□□□□ -0.46
SHMT2-213ENST00000554600 ZMYND12Q9H0C1 365 aa12.17□□□□□ -0.46
SHMT2-213ENST00000554600 IL23AQ9NPF7 189 aa12.17□□□□□ -0.46
SHMT2-213ENST00000554600 JADE2Q9NQC1 790 aa12.17□□□□□ -0.46
SHMT2-213ENST00000554600 H3BRB1 525 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 MAFGO15525 162 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 ATP9AO75110 1047 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 CDKL5O76039 1030 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 DEXIO95424 95 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 HOXD8P13378 290 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-213ENST00000554600 KCNA2P16389 499 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 SREBF1P36956 1147 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 NEK4P51957 841 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 ARHGAP4P98171 946 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 BFSP2Q13515 415 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 MCTP2Q6DN12 878 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 ZNF365Q70YC5 407 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 TRIM50Q86XT4 487 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 RPUSD2Q8IZ73 545 aaKnown RBP12.16□□□□□ -0.46
SHMT2-213ENST00000554600 CYP2W1Q8TAV3 490 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 RASGRP4Q8TDF6 673 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 GPR20Q99678 358 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 SDF4Q9BRK5 362 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 C16orf70Q9BSU1 422 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 WNT8AQ9H1J5 351 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 TUT1Q9H6E5 874 aaKnown RBP12.16□□□□□ -0.46
SHMT2-213ENST00000554600 KCNH7Q9NS40 1196 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 GTF2IRD1Q9UHL9 959 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 ZNF215Q9UL58 517 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-213ENST00000554600 UNC80Q8N2C7 3258 aa12.16□□□□□ -0.46
SHMT2-213ENST00000554600 MICAL3Q7RTP6 2002 aa12.15□□□□□ -0.46
SHMT2-213ENST00000554600 C17orf102A2RUQ5 167 aa12.15□□□□□ -0.46
SHMT2-213ENST00000554600 DDX39AO00148 427 aaKnown RBP12.15□□□□□ -0.46
SHMT2-213ENST00000554600 HAS3O00219 553 aa12.15□□□□□ -0.46
SHMT2-213ENST00000554600 FGBP02675 491 aa12.15□□□□□ -0.46
SHMT2-213ENST00000554600 ARP10275 920 aa12.15□□□□□ -0.46
SHMT2-213ENST00000554600 TCF7P36402 384 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-213ENST00000554600 CLK2P49760 499 aaKnown RBP12.15□□□□□ -0.46
SHMT2-213ENST00000554600 ZNF200P98182 395 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-213ENST00000554600 SCRN1Q12765 414 aa12.15□□□□□ -0.46
SHMT2-213ENST00000554600 CEP55Q53EZ4 464 aa12.15□□□□□ -0.46
SHMT2-213ENST00000554600 TMEM240Q5SV17 173 aa12.15□□□□□ -0.46
SHMT2-213ENST00000554600 C16orf59Q7L2K0 433 aa12.15□□□□□ -0.46
SHMT2-213ENST00000554600 OTOP2Q7RTS6 562 aa12.15□□□□□ -0.46
SHMT2-213ENST00000554600 SESTD1Q86VW0 696 aa12.15□□□□□ -0.46
SHMT2-213ENST00000554600 PLA2G4DQ86XP0 818 aa12.15□□□□□ -0.46
SHMT2-213ENST00000554600 DEFB123Q8N688 67 aa12.15□□□□□ -0.46
SHMT2-213ENST00000554600 UIMC1Q96RL1 719 aa12.15□□□□□ -0.46
SHMT2-213ENST00000554600 FTOQ9C0B1 505 aaKnown RBP eCLIP12.15□□□□□ -0.46
SHMT2-213ENST00000554600 MTIF3Q9H2K0 278 aaKnown RBP12.15□□□□□ -0.46
SHMT2-213ENST00000554600 JPH1Q9HDC5 661 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-213ENST00000554600 SH3GLB2Q9NR46 395 aa12.15□□□□□ -0.46
SHMT2-213ENST00000554600 TPCN1Q9ULQ1 816 aa12.15□□□□□ -0.46
SHMT2-213ENST00000554600 TELO2Q9Y4R8 837 aa12.15□□□□□ -0.46
SHMT2-213ENST00000554600 PTPRSQ13332 1948 aa12.15□□□□□ -0.46
SHMT2-213ENST00000554600 ZBBXA8MT70 800 aa12.14□□□□□ -0.47
SHMT2-213ENST00000554600 PITPNM1O00562 1244 aa12.14□□□□□ -0.47
SHMT2-213ENST00000554600 ADAMTS3O15072 1205 aa12.14□□□□□ -0.47
SHMT2-213ENST00000554600 PFKFB2O60825 505 aa12.14□□□□□ -0.47
SHMT2-213ENST00000554600 DTNBO60941 627 aa12.14□□□□□ -0.47
SHMT2-213ENST00000554600 SMIM10L2AP0DMW4 78 aa12.14□□□□□ -0.47
SHMT2-213ENST00000554600 SMIM10L2BP0DMW5 78 aa12.14□□□□□ -0.47
SHMT2-213ENST00000554600 Q7L0L9 218 aa12.14□□□□□ -0.47
SHMT2-213ENST00000554600 CAGE1Q8TC20 777 aa12.14□□□□□ -0.47
SHMT2-213ENST00000554600 SEPT1Q8WYJ6 367 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms