RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 PDXDC1Q6P996 788 aa17.34■□□□□ 0.37
ARHGEF40-203ENST00000554514 HDAC7Q8WUI4 952 aa17.34■□□□□ 0.37
ARHGEF40-203ENST00000554514 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.34■□□□□ 0.37
ARHGEF40-203ENST00000554514 SNX12Q9UMY4 172 aa17.34■□□□□ 0.37
ARHGEF40-203ENST00000554514 ADAMTSL1Q8N6G6 1762 aa17.34■□□□□ 0.37
ARHGEF40-203ENST00000554514 GDF11O95390 407 aa17.34■□□□□ 0.37
ARHGEF40-203ENST00000554514 CAPN2P17655 700 aa17.34■□□□□ 0.37
ARHGEF40-203ENST00000554514 CDK17Q00537 523 aa17.34■□□□□ 0.37
ARHGEF40-203ENST00000554514 CDC37Q16543 378 aaPredicted RBP17.34■□□□□ 0.37
ARHGEF40-203ENST00000554514 PRR16Q569H4 304 aa17.34■□□□□ 0.37
ARHGEF40-203ENST00000554514 CCDC181Q5TID7 509 aa17.34■□□□□ 0.37
ARHGEF40-203ENST00000554514 DNAJC18Q9H819 358 aa17.34■□□□□ 0.37
ARHGEF40-203ENST00000554514 JRKLQ9Y4A0 524 aa17.34■□□□□ 0.37
ARHGEF40-203ENST00000554514 ANO9A1A5B4 782 aa17.34■□□□□ 0.37
ARHGEF40-203ENST00000554514 EPS15P42566 896 aa17.34■□□□□ 0.37
ARHGEF40-203ENST00000554514 TAF3Q5VWG9 929 aa17.34■□□□□ 0.37
ARHGEF40-203ENST00000554514 ZNF662Q6ZS27 426 aa17.34■□□□□ 0.37
ARHGEF40-203ENST00000554514 EXOC4Q96A65 974 aa17.34■□□□□ 0.37
ARHGEF40-203ENST00000554514 ALS2CR12Q96Q35 445 aa17.34■□□□□ 0.37
ARHGEF40-203ENST00000554514 ANO3Q9BYT9 981 aa17.34■□□□□ 0.37
ARHGEF40-203ENST00000554514 AFF2P51816 1311 aa17.33■□□□□ 0.37
ARHGEF40-203ENST00000554514 MED24O75448 989 aa17.33■□□□□ 0.37
ARHGEF40-203ENST00000554514 EHHADHQ08426 723 aa17.33■□□□□ 0.37
ARHGEF40-203ENST00000554514 PSMD2Q13200 908 aa17.33■□□□□ 0.37
ARHGEF40-203ENST00000554514 RAPGEF1Q13905 1077 aa17.33■□□□□ 0.37
ARHGEF40-203ENST00000554514 ZSCAN26Q16670 478 aa17.33■□□□□ 0.37
ARHGEF40-203ENST00000554514 SLFN13Q68D06 897 aa17.33■□□□□ 0.37
ARHGEF40-203ENST00000554514 PPP1R18Q6NYC8 613 aa17.33■□□□□ 0.37
ARHGEF40-203ENST00000554514 CCDC65Q8IXS2 484 aa17.33■□□□□ 0.37
ARHGEF40-203ENST00000554514 DDTLA6NHG4 134 aaPredicted RBP17.33■□□□□ 0.36
ARHGEF40-203ENST00000554514 CRKP46108 304 aa17.33■□□□□ 0.36
ARHGEF40-203ENST00000554514 SEPT2Q15019 361 aa17.33■□□□□ 0.36
ARHGEF40-203ENST00000554514 CREG2Q8IUH2 290 aa17.33■□□□□ 0.36
ARHGEF40-203ENST00000554514 LRRC1Q9BTT6 524 aa17.33■□□□□ 0.36
ARHGEF40-203ENST00000554514 ACBD3Q9H3P7 528 aa17.33■□□□□ 0.36
ARHGEF40-203ENST00000554514 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.33■□□□□ 0.36
ARHGEF40-203ENST00000554514 TUBBP07437 444 aa17.32■□□□□ 0.36
ARHGEF40-203ENST00000554514 HNRNPH3P31942 346 aaKnown RBP17.32■□□□□ 0.36
ARHGEF40-203ENST00000554514 PABPC4Q13310 644 aaKnown RBP eCLIP17.32■□□□□ 0.36
ARHGEF40-203ENST00000554514 MAP9Q49MG5 647 aa17.32■□□□□ 0.36
ARHGEF40-203ENST00000554514 DHX37Q8IY37 1157 aaKnown RBP17.32■□□□□ 0.36
ARHGEF40-203ENST00000554514 ZNF622Q969S3 477 aaKnown RBP eCLIP17.32■□□□□ 0.36
ARHGEF40-203ENST00000554514 MTMR8Q96EF0 704 aa17.32■□□□□ 0.36
ARHGEF40-203ENST00000554514 OSBPL9Q96SU4 736 aa17.32■□□□□ 0.36
ARHGEF40-203ENST00000554514 FAM204AQ9H8W3 233 aa17.32■□□□□ 0.36
ARHGEF40-203ENST00000554514 PSMC6P62333 389 aa17.32■□□□□ 0.36
ARHGEF40-203ENST00000554514 CYP4A11Q02928 519 aa17.32■□□□□ 0.36
ARHGEF40-203ENST00000554514 SKIDA1Q1XH10 827 aa17.32■□□□□ 0.36
ARHGEF40-203ENST00000554514 CERKLQ49MI3 558 aaPredicted RBP17.32■□□□□ 0.36
ARHGEF40-203ENST00000554514 FAM83BQ5T0W9 1011 aa17.32■□□□□ 0.36
ARHGEF40-203ENST00000554514 SFMBT2Q5VUG0 894 aa17.32■□□□□ 0.36
ARHGEF40-203ENST00000554514 MS4A14Q96JA4 679 aa17.32■□□□□ 0.36
ARHGEF40-203ENST00000554514 NT5C3AQ9H0P0 336 aa17.32■□□□□ 0.36
ARHGEF40-203ENST00000554514 EMILIN3Q9NT22 766 aa17.32■□□□□ 0.36
ARHGEF40-203ENST00000554514 RNF40O75150 1001 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 RNASE9P60153 205 aaKnown RBP17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 ADAM9Q13443 819 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 SAMD1Q6SPF0 538 aaPredicted RBP17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 SELENOOQ9BVL4 669 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 THSD7AQ9UPZ6 1657 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 KDM3AQ9Y4C1 1321 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 FAM170AA1A519 330 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 CYP11B2P19099 503 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 CASP5P51878 434 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 ZCWPW2Q504Y3 356 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 CCDC70Q6NSX1 233 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 SLC30A10Q6XR72 485 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 DNAAF5Q86Y56 855 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 FAM133AQ8N9E0 248 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 FAM71BQ8TC56 605 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 SCFD1Q8WVM8 642 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 RPGRIP1Q96KN7 1286 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 DMGDHQ9UI17 866 aaKnown RBP17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 HPCAL4Q9UM19 191 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 ATF5Q9Y2D1 282 aaPredicted RBP17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 MYH4Q9Y623 1939 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 NOL4O94818 638 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 GCFC2P16383 781 aaKnown RBP17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 HOXA13P31271 388 aaPredicted RBP17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 PTPROQ16827 1216 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 SLC9C1Q4G0N8 1177 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 HGSNATQ68CP4 663 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 MSL1Q68DK7 614 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 IQCEQ6IPM2 695 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 IQCDQ96DY2 449 aa17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 P2RX7Q99572 595 aaKnown RBP17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 TMX4Q9H1E5 349 aaPredicted RBP17.31■□□□□ 0.36
ARHGEF40-203ENST00000554514 TLR2O60603 784 aa17.3■□□□□ 0.36
ARHGEF40-203ENST00000554514 FTCDO95954 541 aa17.3■□□□□ 0.36
ARHGEF40-203ENST00000554514 ACTN1P12814 892 aa17.3■□□□□ 0.36
ARHGEF40-203ENST00000554514 MCM3P25205 808 aa17.3■□□□□ 0.36
ARHGEF40-203ENST00000554514 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.3■□□□□ 0.36
ARHGEF40-203ENST00000554514 PROM2Q8N271 834 aa17.3■□□□□ 0.36
ARHGEF40-203ENST00000554514 SPATA4Q8NEY3 305 aa17.3■□□□□ 0.36
ARHGEF40-203ENST00000554514 TBC1D5Q92609 795 aa17.3■□□□□ 0.36
ARHGEF40-203ENST00000554514 BCAS3Q9H6U6 928 aa17.3■□□□□ 0.36
ARHGEF40-203ENST00000554514 PACSIN2Q9UNF0 486 aaPredicted RBP17.3■□□□□ 0.36
ARHGEF40-203ENST00000554514 UBR3Q6ZT12 1888 aa17.3■□□□□ 0.36
ARHGEF40-203ENST00000554514 GGCXP38435 758 aa17.3■□□□□ 0.36
ARHGEF40-203ENST00000554514 CCNI2Q6ZMN8 369 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms