RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 RABL6Q3YEC7 729 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-207ENST00000554439 ARSJQ5FYB0 599 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-207ENST00000554439 ZNF569Q5MCW4 686 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 SLC9C2Q5TAH2 1124 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 RASIP1Q5U651 963 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 RESP18Q5W5W9 173 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 KRT40Q6A162 431 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 KLHL10Q6JEL2 608 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 TPTE2Q6XPS3 522 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 CCDC81Q6ZN84 652 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 USP49Q70CQ1 688 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 CYB5R4Q7L1T6 521 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 MICU3Q86XE3 530 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 CCNJLQ8IV13 435 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 MB21D2Q8IYB1 491 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-207ENST00000554439 SMYD4Q8IYR2 804 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-207ENST00000554439 GOLM1Q8NBJ4 401 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 NOA1Q8NC60 698 aaKnown RBP2.89□□□□□ -1.95
PRPF39-207ENST00000554439 ACRBPQ8NEB7 543 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 SH3TC2Q8TF17 1288 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 STAG1Q8WVM7 1258 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 RIN2Q8WYP3 895 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-207ENST00000554439 CEP63Q96MT8 703 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 GDAP1L1Q96MZ0 367 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 TSPYL1Q9H0U9 437 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 RABEP2Q9H5N1 569 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 LIN7BQ9HAP6 207 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 TOMM22Q9NS69 142 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 DZANK1Q9NVP4 752 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 PPT2Q9UMR5 302 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 L1RE1Q9UN81 338 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 TFR2Q9UP52 801 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 COL4A3BPQ9Y5P4 624 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 PLEKHG2Q9H7P9 1386 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 A0A1B0GUL7 405 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 EIF3CLB5ME19 914 aaKnown RBP2.89□□□□□ -1.95
PRPF39-207ENST00000554439 NFKBIEO00221 500 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 OIP5O43482 229 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 RANBP6O60518 1105 aaKnown RBP2.89□□□□□ -1.95
PRPF39-207ENST00000554439 KIF4AO95239 1232 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 EPB42P16452 691 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 ZNF18P17022 549 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 CASP7P55210 303 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 LMNB2Q03252 620 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 NR1I3Q14994 352 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 IMMTQ16891 758 aaKnown RBP2.89□□□□□ -1.95
PRPF39-207ENST00000554439 RSPO4Q2I0M5 234 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-207ENST00000554439 JAKMIP3Q5VZ66 844 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 NCAPH2Q6IBW4 605 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 LRRC31Q6UY01 552 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 LEKR1Q6ZMV7 388 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 AGMOQ6ZNB7 445 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 FAM196AQ6ZSG2 479 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 SRGAP1Q7Z6B7 1085 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 FCHSD1Q86WN1 690 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 TBC1D10CQ8IV04 446 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 SLC35F6Q8N357 371 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 EIF3CQ99613 913 aaKnown RBP2.89□□□□□ -1.95
PRPF39-207ENST00000554439 TRIM55Q9BYV6 548 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 RAI14Q9P0K7 980 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 TRIM10Q9UDY6 481 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 KCNJ14Q9UNX9 436 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 C4AP0C0L4 1744 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 C4BP0C0L5 1744 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 RFX7Q2KHR2 1363 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 NFAT5O94916 1531 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 TTLL8A6PVC2 850 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 METTL12A8MUP2 240 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 BTBD18B2RXH4 712 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 B4E1Z4 1266 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 AKR1B15C9JRZ8 316 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 SMAD7O15105 426 aaKnown RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 EFSO43281 561 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 HYAL3O43820 417 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 PPP6R2O75170 966 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 TRPA1O75762 1119 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 PARNO95453 639 aaKnown RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 GCP02774 474 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 CCDC175P0C221 793 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 EDN3P14138 238 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 ITPKAP23677 461 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 CASP14P31944 242 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 CCT6AP40227 531 aaKnown RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 AFMP43652 599 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 GATA4P43694 442 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 METAP2P50579 478 aaKnown RBP eCLIP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 TOB1P50616 345 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 FXR1P51114 621 aaKnown RBP eCLIP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 IRX3P78415 501 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 AMPD3Q01432 767 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 FAAP100Q0VG06 881 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 CASP8Q14790 479 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 SART3Q15020 963 aaKnown RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 BRD3Q15059 726 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 POSTNQ15063 836 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 KIF4BQ2VIQ3 1234 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 AMOTQ4VCS5 1084 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 TTC39AQ5SRH9 613 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 C6orf118Q5T5N4 469 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 SAMD5Q5TGI4 173 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 657.7 ms