RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 REXO1Q8N1G1 1221 aaKnown RBP14.93□□□□□ -0.02
SHMT2-211ENST00000554310 C7orf31Q8N865 590 aa14.93□□□□□ -0.02
SHMT2-211ENST00000554310 LRCH3Q96II8 777 aa14.93□□□□□ -0.02
SHMT2-211ENST00000554310 RNPC3Q96LT9 517 aaKnown RBP14.93□□□□□ -0.02
SHMT2-211ENST00000554310 ANP32EQ9BTT0 268 aa14.93□□□□□ -0.02
SHMT2-211ENST00000554310 JADE2Q9NQC1 790 aa14.93□□□□□ -0.02
SHMT2-211ENST00000554310 PITPNM1O00562 1244 aa14.92□□□□□ -0.02
SHMT2-211ENST00000554310 LGALS2P05162 132 aa14.92□□□□□ -0.02
SHMT2-211ENST00000554310 CYP2C9P11712 490 aa14.92□□□□□ -0.02
SHMT2-211ENST00000554310 KCNA2P16389 499 aa14.92□□□□□ -0.02
SHMT2-211ENST00000554310 PTGISQ16647 500 aa14.92□□□□□ -0.02
SHMT2-211ENST00000554310 FAM177A1Q8N128 213 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-211ENST00000554310 CCDC155Q8N6L0 562 aa14.92□□□□□ -0.02
SHMT2-211ENST00000554310 BICD2Q8TD16 824 aa14.92□□□□□ -0.02
SHMT2-211ENST00000554310 GPR20Q99678 358 aa14.92□□□□□ -0.02
SHMT2-211ENST00000554310 C16orf70Q9BSU1 422 aa14.92□□□□□ -0.02
SHMT2-211ENST00000554310 WNT8AQ9H1J5 351 aa14.92□□□□□ -0.02
SHMT2-211ENST00000554310 IL23AQ9NPF7 189 aa14.92□□□□□ -0.02
SHMT2-211ENST00000554310 SH3GLB2Q9NR46 395 aa14.92□□□□□ -0.02
SHMT2-211ENST00000554310 GTF2IRD1Q9UHL9 959 aa14.92□□□□□ -0.02
SHMT2-211ENST00000554310 UMODL1Q5DID0 1318 aa14.92□□□□□ -0.02
SHMT2-211ENST00000554310 CDKL5O76039 1030 aa14.91□□□□□ -0.02
SHMT2-211ENST00000554310 DEXIO95424 95 aa14.91□□□□□ -0.02
SHMT2-211ENST00000554310 SSRP1Q08945 709 aaKnown RBP14.91□□□□□ -0.02
SHMT2-211ENST00000554310 GDF6Q6KF10 455 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-211ENST00000554310 CAGE1Q8TC20 777 aa14.91□□□□□ -0.02
SHMT2-211ENST00000554310 PPP1R13LQ8WUF5 828 aa14.91□□□□□ -0.02
SHMT2-211ENST00000554310 PGBD1Q96JS3 809 aa14.91□□□□□ -0.02
SHMT2-211ENST00000554310 MXRA8Q9BRK3 442 aa14.91□□□□□ -0.02
SHMT2-211ENST00000554310 ALG1Q9BT22 464 aa14.91□□□□□ -0.02
SHMT2-211ENST00000554310 BCAS3Q9H6U6 928 aa14.91□□□□□ -0.02
SHMT2-211ENST00000554310 TMEM260Q9NX78 707 aa14.91□□□□□ -0.02
SHMT2-211ENST00000554310 HDAC6Q9UBN7 1215 aa14.91□□□□□ -0.02
SHMT2-211ENST00000554310 ZNF215Q9UL58 517 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-211ENST00000554310 H3BRB1 525 aa14.9□□□□□ -0.02
SHMT2-211ENST00000554310 PFKMP08237 780 aa14.9□□□□□ -0.02
SHMT2-211ENST00000554310 RFC2P35250 354 aa14.9□□□□□ -0.02
SHMT2-211ENST00000554310 CCL23P55773 120 aa14.9□□□□□ -0.02
SHMT2-211ENST00000554310 ARHGAP4P98171 946 aa14.9□□□□□ -0.02
SHMT2-211ENST00000554310 STK3Q13188 491 aa14.9□□□□□ -0.02
SHMT2-211ENST00000554310 BFSP2Q13515 415 aa14.9□□□□□ -0.02
SHMT2-211ENST00000554310 CEP55Q53EZ4 464 aa14.9□□□□□ -0.02
SHMT2-211ENST00000554310 JAKMIP3Q5VZ66 844 aa14.9□□□□□ -0.02
SHMT2-211ENST00000554310 NIPA1Q7RTP0 329 aa14.9□□□□□ -0.02
SHMT2-211ENST00000554310 CRYGNQ8WXF5 182 aa14.9□□□□□ -0.02
SHMT2-211ENST00000554310 CTAGE1Q96RT6 745 aa14.9□□□□□ -0.02
SHMT2-211ENST00000554310 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.9□□□□□ -0.023e-9■□□□□ 10
SHMT2-211ENST00000554310 LARP6Q9BRS8 491 aaKnown RBP14.9□□□□□ -0.02
SHMT2-211ENST00000554310 SLKQ9H2G2 1235 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-211ENST00000554310 TUT1Q9H6E5 874 aaKnown RBP14.9□□□□□ -0.02
SHMT2-211ENST00000554310 UPF2Q9HAU5 1272 aaKnown RBP14.9□□□□□ -0.02
SHMT2-211ENST00000554310 JPH1Q9HDC5 661 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-211ENST00000554310 KCNH7Q9NS40 1196 aa14.9□□□□□ -0.02
SHMT2-211ENST00000554310 VPS54Q9P1Q0 977 aa14.9□□□□□ -0.02
SHMT2-211ENST00000554310 NFASCO94856 1347 aa14.9□□□□□ -0.02
SHMT2-211ENST00000554310 STK36Q9NRP7 1315 aa14.9□□□□□ -0.02
SHMT2-211ENST00000554310 SCN5AQ14524 2016 aa14.89□□□□□ -0.03
SHMT2-211ENST00000554310 PFKFB2O60825 505 aa14.89□□□□□ -0.03
SHMT2-211ENST00000554310 ATP9AO75110 1047 aa14.89□□□□□ -0.03
SHMT2-211ENST00000554310 PPFIA3O75145 1194 aa14.89□□□□□ -0.03
SHMT2-211ENST00000554310 CYP3A4P08684 503 aa14.89□□□□□ -0.03
SHMT2-211ENST00000554310 AK2P54819 239 aa14.89□□□□□ -0.03
SHMT2-211ENST00000554310 SMAD3P84022 425 aaKnown RBP14.89□□□□□ -0.03
SHMT2-211ENST00000554310 SP4Q02446 784 aa14.89□□□□□ -0.03
SHMT2-211ENST00000554310 RBL2Q08999 1139 aa14.89□□□□□ -0.03
SHMT2-211ENST00000554310 SCRN1Q12765 414 aa14.89□□□□□ -0.03
SHMT2-211ENST00000554310 TMEM240Q5SV17 173 aa14.89□□□□□ -0.03
SHMT2-211ENST00000554310 C16orf59Q7L2K0 433 aa14.89□□□□□ -0.03
SHMT2-211ENST00000554310 RPUSD2Q8IZ73 545 aaKnown RBP14.89□□□□□ -0.03
SHMT2-211ENST00000554310 RETREG2Q8NC44 543 aa14.89□□□□□ -0.03
SHMT2-211ENST00000554310 AFAP1L1Q8TED9 768 aa14.89□□□□□ -0.03
SHMT2-211ENST00000554310 SDF4Q9BRK5 362 aa14.89□□□□□ -0.03
SHMT2-211ENST00000554310 MTIF3Q9H2K0 278 aaKnown RBP14.89□□□□□ -0.03
SHMT2-211ENST00000554310 PKD2L1Q9P0L9 805 aa14.89□□□□□ -0.03
SHMT2-211ENST00000554310 TPCN1Q9ULQ1 816 aa14.89□□□□□ -0.03
SHMT2-211ENST00000554310 TRIP12Q14669 1992 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-211ENST00000554310 MEIS1O00470 390 aa14.88□□□□□ -0.03
SHMT2-211ENST00000554310 SEC24BO95487 1268 aa14.88□□□□□ -0.03
SHMT2-211ENST00000554310 HOXC8P31273 242 aa14.88□□□□□ -0.03
SHMT2-211ENST00000554310 TCF7P36402 384 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-211ENST00000554310 ZNF76P36508 570 aa14.88□□□□□ -0.03
SHMT2-211ENST00000554310 SETQ01105 290 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-211ENST00000554310 PTK7Q13308 1070 aa14.88□□□□□ -0.03
SHMT2-211ENST00000554310 RASIP1Q5U651 963 aa14.88□□□□□ -0.03
SHMT2-211ENST00000554310 ZNF365Q70YC5 407 aa14.88□□□□□ -0.03
SHMT2-211ENST00000554310 TRIM50Q86XT4 487 aa14.88□□□□□ -0.03
SHMT2-211ENST00000554310 CYP2W1Q8TAV3 490 aa14.88□□□□□ -0.03
SHMT2-211ENST00000554310 SCLYQ96I15 445 aa14.88□□□□□ -0.03
SHMT2-211ENST00000554310 EMSYQ7Z589 1322 aa14.88□□□□□ -0.03
SHMT2-211ENST00000554310 C17orf102A2RUQ5 167 aa14.87□□□□□ -0.03
SHMT2-211ENST00000554310 SMIM10L2AP0DMW4 78 aa14.87□□□□□ -0.03
SHMT2-211ENST00000554310 SMIM10L2BP0DMW5 78 aa14.87□□□□□ -0.03
SHMT2-211ENST00000554310 ACRP10323 421 aa14.87□□□□□ -0.03
SHMT2-211ENST00000554310 NLRP5P59047 1200 aa14.87□□□□□ -0.03
SHMT2-211ENST00000554310 UTP14CQ5TAP6 766 aaKnown RBP14.87□□□□□ -0.03
SHMT2-211ENST00000554310 GALNT17Q6IS24 598 aa14.87□□□□□ -0.03
SHMT2-211ENST00000554310 DAGLBQ8NCG7 672 aa14.87□□□□□ -0.03
SHMT2-211ENST00000554310 SEPT1Q8WYJ6 367 aa14.87□□□□□ -0.03
SHMT2-211ENST00000554310 HERVK_113Q902F9 699 aa14.87□□□□□ -0.03
SHMT2-211ENST00000554310 DHX38Q92620 1227 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms